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Items: 17

1.
Motor neurons use push-pull signals to direct vascular remodeling critical for their connectivity
Luis F. Martins, Ilaria Brambilla, Alessia Motta, Stefano de Pretis, Ganesh Parameshwar Bhat, Aurora Badaloni, Chiara Malpighi, Neal D. Amin, Fumiyasu Imai, Ramiro D. Almeida, Yutaka Yoshida, Samuel L. Pfaff, Dario Bonanomi
Neuron. Author manuscript; available in PMC 2023 Jul 3.
Published in final edited form as: Neuron. 2022 Dec 21; 110(24): 4090–4107.e11. Published online 2022 Oct 13. doi: 10.1016/j.neuron.2022.09.021
PMCID:
PMC10316999
AbstractArticlePDF–5.9M
2.
Notch1 promotes ordered revascularization through Semaphorin 3g modulation of downstream vascular patterning signalling factors
James Hyun, Monica Lee, Jalees Rehman, Kostandin V. Pajcini, Asrar B. Malik
J Physiol. 2022 Feb 1; 600(3): 509–530. Published online 2022 Jan 17. doi: 10.1113/JP282286
PMCID:
PMC9305962
AbstractArticlePDF–7.2M
3.
A SOX17-PDGFB signaling axis regulates aortic root development
Pengfei Lu, Ping Wang, Bingruo Wu, Yidong Wang, Yang Liu, Wei Cheng, Xuhui Feng, Xinchun Yuan, Miriam M. Atteya, Haleigh Ferro, Yukiko Sugi, Grant Rydquist, Mahdi Esmaily, Jonathan T. Butcher, Ching-Pin Chang, Jack Lenz, Deyou Zheng, Bin Zhou
Nat Commun. 2022; 13: 4065. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31815-1
PMCID:
PMC9279414
AbstractArticlePDF–11M
4.
Endothelium-derived semaphorin 3G attenuates ischemic retinopathy by coordinating β-catenin–dependent vascular remodeling
Dan-Yang Chen, Ning-He Sun, Xiang Chen, Jun-Jie Gong, Song-Tao Yuan, Zi-Zhong Hu, Nan-Nan Lu, Jakob Körbelin, Kohji Fukunaga, Qing-Huai Liu, Ying-Mei Lu, Feng Han
J Clin Invest. 2021 Feb 15; 131(4): e135296. Published online 2021 Feb 15. doi: 10.1172/JCI135296
PMCID:
PMC7880421
AbstractArticlePDF–24M
5.
A novel podocyte gene, semaphorin 3G, protects glomerular podocyte from lipopolysaccharide-induced inflammation
Ryoichi Ishibashi, Minoru Takemoto, Yoshihiro Akimoto, Takahiro Ishikawa, Peng He, Yoshiro Maezawa, Kenichi Sakamoto, Yuya Tsurutani, Shintaro Ide, Kana Ide, Harukiyo Kawamura, Kazuki Kobayashi, Hirotake Tokuyama, Karl Tryggvason, Christer Betsholtz, Koutaro Yokote
Sci Rep. 2016; 6: 25955. Published online 2016 May 16. doi: 10.1038/srep25955
PMCID:
PMC4867620
AbstractArticlePDF–1.8M
6.
An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina
Jasper J Visser, Yolanda Cheng, Steven C Perry, Andrew Benjamin Chastain, Bayan Parsa, Shatha S Masri, Thomas A Ray, Jeremy N Kay, Woj M Wojtowicz
eLife. 2015; 4: e08149. Published online 2015 Dec 2. doi: 10.7554/eLife.08149
PMCID:
PMC4737655
AbstractArticlePDF–4.2M
7.
Class 3 semaphorins negatively regulate dermal lymphatic network formation
Yutaka Uchida, Jennifer M. James, Fumikazu Suto, Yoh-suke Mukouyama
Biol Open. 2015 Sep 15; 4(9): 1194–1205. Published online 2015 Aug 28. doi: 10.1242/bio.012302
PMCID:
PMC4582121
AbstractArticlePDF–3.0M
8.
Deletion of Sema3a or plexinA1/plexinA3 Causes Defects in Sensory Afferent Projections of Statoacoustic Ganglion Neurons
Kei-ichi Katayama, Fumiyasu Imai, Fumikazu Suto, Yutaka Yoshida
PLoS One. 2013; 8(8): e72512. Published online 2013 Aug 26. doi: 10.1371/journal.pone.0072512
PMCID:
PMC3753268
AbstractArticlePDF–11M
9.
Integration of Repulsive Guidance Cues Generates Avascular Zones that Shape Mammalian Blood Vessels
Stryder M. Meadows, Peter J. Fletcher, Carlos Moran, Ke Xu, Gera Neufeld, Sophie Chauvet, Fanny Mann, Paul Krieg, Ondine Cleaver
Circ Res. Author manuscript; available in PMC 2013 Jan 6.
Published in final edited form as: Circ Res. 2012 Jan 6; 110(1): 34–46. Published online 2011 Nov 10. doi: 10.1161/CIRCRESAHA.111.249847
PMCID:
PMC3253216
AbstractArticlePDF–2.0M
10.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
11.
Semaphorin 3F Is a Bifunctional Guidance Cue for Dopaminergic Axons and Controls Their Fasciculation, Channeling, Rostral Growth, and Intracortical Targeting
Sharon M. Kolk, Rou-Afza F. Gunput, Tracy S. Tran, Dianne M. A. van den Heuvel, Asheeta A. Prasad, Anita J. C. G. M. Hellemons, Youri Adolfs, David D. Ginty, Alex L. Kolodkin, J. Peter H. Burbach, Marten P. Smidt, R. Jeroen Pasterkamp
J Neurosci. 2009 Oct 7; 29(40): 12542–12557. doi: 10.1523/JNEUROSCI.2521-09.2009
PMCID:
PMC3097132
AbstractArticlePDF–8.1M
12.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
13.
PlexinA1 signaling directs sensory axon segregation in the developing spinal cord: a role for proprioceptive axon exclusion in cutaneous afferent organization
Yutaka Yoshida, Barbara Han, Monica Mendelsohn, Thomas M. Jessell
Neuron. Author manuscript; available in PMC 2007 Dec 7.
Published in final edited form as: Neuron. 2006 Dec 7; 52(5): 775–788. doi: 10.1016/j.neuron.2006.10.032
PMCID:
PMC1847564
AbstractArticlePDF–6.8M
14.
Large-scale identification of genes implicated in kidney glomerulus development and function
Minoru Takemoto, Liqun He, Jenny Norlin, Jaakko Patrakka, Zhijie Xiao, Tatiana Petrova, Cecilia Bondjers, Julia Asp, Elisabet Wallgard, Ying Sun, Tore Samuelsson, Petter Mostad, Samuel Lundin, Naoyuki Miura, Yoshikazu Sado, Kari Alitalo, Susan E Quaggin, Karl Tryggvason, Christer Betsholtz
EMBO J. 2006 Mar 8; 25(5): 1160–1174. Published online 2006 Feb 23. doi: 10.1038/sj.emboj.7601014
PMCID:
PMC1409724
AbstractArticlePDF–834K
15.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
16.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
17.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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