PMC Links for GEO Profiles (Select 38617345) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 80934884.

The N-Terminal Tail of Histone H3 Regulates Copper Homeostasis in Saccharomyces cerevisiae

Sakshi Singh, Rakesh Kumar Sahu, Raghuvir Singh Tomar

Mol Cell Biol. 2021 Feb; 41(2): e00210-20. Prepublished online 2020 Nov 30. Published online 2021 Jan 25. doi: 10.1128/MCB.00210-20

PMCID:: PMC8093488

Abstract Article PDF–3.8M

Select item 76956945.

Yeast Nup84-Nup133 complex structure details flexibility and reveals conservation of the membrane anchoring ALPS motif

Sarah A. Nordeen, Daniel L. Turman, Thomas U. Schwartz

Nat Commun. 2020; 11: 6060. Published online 2020 Nov 27. doi: 10.1038/s41467-020-19885-5

PMCID:: PMC7695694

Abstract Article PDF–2.0M

Select item 71018146.

Regulated nuclear localisation of the yeast transcription factor Ace2p controls expression of chitinase (CTS1) in Saccharomyces cerevisiae

C. O'Conalláin, M.-T. Doolin, C. Taggart, F. Thornton, G. Butler

Mol Gen Genet. 1999; 262(2): 275–282. doi: 10.1007/s004380051084

PMCID:: PMC7101814

Abstract Article PDF–391K

Select item 68291297.

Multiple Changes Underlie Allelic Divergence of CUP2 Between Saccharomyces Species

Xueying C. Li, Justin C. Fay

G3 (Bethesda) 2019 Nov; 9(11): 3595–3600. Published online 2019 Sep 25. doi: 10.1534/g3.119.400616

PMCID:: PMC6829129

Abstract Article PDF–875K

Select item 62913668.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 62897199.

Single-Molecule Analysis Reveals Linked Cycles Of RSC Chromatin Remodeling and Ace1p Transcription Factor Binding in Yeast

Gunjan D. Mehta, David A. Ball, Peter R. Eriksson, Razvan. V. Chereji, David J. Clark, James G. McNally, Tatiana S. Karpova

Mol Cell. Author manuscript; available in PMC 2019 Dec 6.

Published in final edited form as: Mol Cell. 2018 Dec 6; 72(5): 875–887.e9. Published online 2018 Oct 11. doi: 10.1016/j.molcel.2018.09.009

PMCID:: PMC6289719

Abstract Article PDF–2.5M

Select item 576535910.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 566188511.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 560025412.

The Genetic Landscape of a Cell

Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Sep 15.

Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823

PMCID:: PMC5600254

Abstract Article PDF–2.4M

Select item 558638313.

Histone Acetylation, Not Stoichiometry, Regulates Linker Histone Binding in Saccharomyces cerevisiae

Mackenzie B. D. Lawrence, Nicolas Coutin, Jennifer K. Choi, Benjamin J. E. Martin, Nicholas A. T. Irwin, Barry Young, Christopher Loewen, LeAnn J. Howe

Genetics. 2017 Sep; 207(1): 347–355. Published online 2017 Jul 26. doi: 10.1534/genetics.117.1132

PMCID:: PMC5586383

Abstract Article PDF–1.4M

Select item 534572114.

Functional Analysis of Kinases and Transcription Factors in Saccharomyces cerevisiae Using an Integrated Overexpression Library

Ji-Young Youn, Helena Friesen, Alex N. Nguyen Ba, Wendy Liang, Vincent Messier, Mike J. Cox, Alan M. Moses, Brenda Andrews

G3 (Bethesda) 2017 Mar; 7(3): 911–921. Published online 2017 Jan 22. doi: 10.1534/g3.116.038471

PMCID:: PMC5345721

Abstract Article PDF–1.6M

Select item 520434815.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 513743216.

Single molecule tracking of Ace1p in Saccharomyces cerevisiae defines a characteristic residence time for non-specific interactions of transcription factors with chromatin

David A. Ball, Gunjan D. Mehta, Ronit Salomon-Kent, Davide Mazza, Tatsuya Morisaki, Florian Mueller, James G. McNally, Tatiana S. Karpova

Nucleic Acids Res. 2016 Dec 1; 44(21): e160. Published online 2016 Aug 26. doi: 10.1093/nar/gkw744

PMCID:: PMC5137432

Abstract Article PDF–2.1M

Select item 470301217.

Target selection by natural and redesigned PUF proteins

Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112

PMCID:: PMC4703012

Abstract Article PDF–1.3M

Select item 470230618.

Polygenic analysis and targeted improvement of the complex trait of high acetic acid tolerance in the yeast Saccharomyces cerevisiae

Jean-Paul Meijnen, Paola Randazzo, María R. Foulquié-Moreno, Joost van den Brink, Paul Vandecruys, Marija Stojiljkovic, Françoise Dumortier, Polona Zalar, Teun Boekhout, Nina Gunde-Cimerman, Janez Kokošar, Miha Štajdohar, Tomaž Curk, Uroš Petrovič, Johan M. Thevelein

Biotechnol Biofuels. 2016; 9: 5. Published online 2016 Jan 6. doi: 10.1186/s13068-015-0421-x

PMCID:: PMC4702306

Abstract Article PDF–2.7M

Select item 414978419.

A chemical potentiator of copper-accumulation used to investigate the iron-regulons of Saccharomyces cerevisiae

Andrew W Foster, Samantha J Dainty, Carl J Patterson, Ehmke Pohl, Hannah Blackburn, Clare Wilson, Corinna R Hess, Julian C Rutherford, Laura Quaranta, Andy Corran, Nigel J Robinson

Mol Microbiol. 2014 Jul; 93(2): 317–330. Published online 2014 Jun 15. doi: 10.1111/mmi.12661

PMCID:: PMC4149784

Abstract Article PDF–3.7M

Select item 381167820.

The Yeast Copper Response Is Regulated by DNA Damage

Kangzhen Dong, Stephen G. Addinall, David Lydall, Julian C. Rutherford

Mol Cell Biol. 2013 Oct; 33(20): 4041–4050. doi: 10.1128/MCB.00116-13

PMCID:: PMC3811678

Abstract Article PDF–1.0M

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