PMC Links for GEO Profiles (Select 38765258) - PMC

Select item 65540701.

Exonuclease Requirements for Mammalian Ribosomal RNA Biogenesis and Surveillance

Mehdi Pirouz, Marzia Munafò, Aref G. Ebrahimi, Junho Choe, Richard I. Gregory

Nat Struct Mol Biol. Author manuscript; available in PMC 2019 Dec 3.

Published in final edited form as: Nat Struct Mol Biol. 2019 Jun; 26(6): 490–500. Published online 2019 Jun 3. doi: 10.1038/s41594-019-0234-x

PMCID:: PMC6554070

Abstract Article PDF–2.4M

Select item 35724102.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 33909523.

Eri1 regulates microRNA homeostasis and mouse lymphocyte development and antiviral function

Molly F. Thomas, Sarah Abdul-Wajid, Marisella Panduro, Joshua E. Babiarz, Misha Rajaram, Prescott Woodruff, Lewis L. Lanier, Vigo Heissmeyer, K. Mark Ansel

Blood. 2012 Jul 5; 120(1): 130–142. Prepublished online 2012 May 21. doi: 10.1182/blood-2011-11-394072

PMCID:: PMC3390952

Abstract Article

Select item 33830654.

Mapping the Nephronophthisis-Joubert-Meckel-Gruber Protein Network Reveals Ciliopathy Disease Genes and Pathways

Liyun Sang, Julie J. Miller, Kevin C. Corbit, Rachel H. Giles, Matthew J. Brauer, Edgar A. Otto, Lisa M. Baye, Xiaohui Wen, Suzie J. Scales, Mandy Kwong, Erik G. Huntzicker, Mindan K. Sfakianos, Wendy Sandoval, J. Fernando Bazan, Priya Kulkarni, Francesc R. Garcia-Gonzalo, Allen D. Seol, John F. O'Toole, Susanne Held, Heiko M. Reutter, William S. Lane, Muhammad Arshad Rafiq, Abdul Noor, Muhammad Ansar, Akella Radha Rama Devi, Val C. Sheffield, Diane C. Slusarski, John B. Vincent, Daniel A. Doherty, Friedhelm Hildebrandt, Jeremy F. Reiter, Peter K. Jackson

Cell. Author manuscript; available in PMC 2012 Jun 26.

Published in final edited form as: Cell. 2011 May 13; 145(4): 513–528. doi: 10.1016/j.cell.2011.04.019

PMCID:: PMC3383065

Abstract Article PDF–2.0M

Select item 31984295.

High-Dose siRNAs Upregulate Mouse Eri-1 at both Transcription and Posttranscription Levels

Yingnan Bian, Wei Zhou, Yingchun Zhao, Xiaoping Li, Wei Geng, Ruixin Hao, Qing Yang, Weida Huang

PLoS One. 2011; 6(10): e26466. Published online 2011 Oct 19. doi: 10.1371/journal.pone.0026466

PMCID:: PMC3198429

Abstract Article PDF–784K

Select item 31780596.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 31101517.

A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58

Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara

Dev Cell. Author manuscript; available in PMC 2011 Jun 7.

Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011

PMCID:: PMC3110151

Abstract Article PDF–2.0M

Select item 30325008.

Mouse Eri1 interacts with the ribosome and catalyzes 5.8S rRNA processing

K Mark Ansel, William A Pastor, Nicola Rath, Ariya D Lapan, Elke Glasmacher, Christine Wolf, Laura C Smith, Nikoletta Papadopoulou, Edward D Lamperti, Mamta Tahiliani, Joachim W Ellwart, Yujiang Shi, Elisabeth Kremmer, Anjana Rao, Vigo Heissmeyer

Nat Struct Mol Biol. Author manuscript; available in PMC 2011 Feb 2.

Published in final edited form as: Nat Struct Mol Biol. 2008 May; 15(5): 523–530. Published online 2008 Apr 27. doi: 10.1038/nsmb.1417

PMCID:: PMC3032500

Abstract Article PDF–1.2M

Select item 27158099.

Three Proteins of the U7-Specific Sm Ring Function as the Molecular Ruler To Determine the Site of 3′-End Processing in Mammalian Histone Pre-mRNA

Xiao-cui Yang, Matthew P. Torres, William F. Marzluff, Zbigniew Dominski

Mol Cell Biol. 2009 Aug; 29(15): 4045–4056. Published online 2009 May 26. doi: 10.1128/MCB.00296-09

PMCID:: PMC2715809

Abstract Article PDF–2.1M

Select item 119966010.

High doses of siRNAs induce eri-1 and adar-1 gene expression and reduce the efficiency of RNA interference in the mouse

Jie Hong, Zhikang Qian, Shuiyuan Shen, Taishan Min, Chang Tan, JianFeng Xu, Yingchun Zhao, Weida Huang

Biochem J. 2005 Sep 15; 390(Pt 3): 675–679. Prepublished online 2005 Jul 11. Published online 2005 Sep 5. doi: 10.1042/BJ20050647

PMCID:: PMC1199660

Abstract Article PDF–229K

Select item 52892811.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099212.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098013.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924114.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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