PMC Links for GEO Profiles (Select 38765633) - PMC

Select item 111793881.

Cystatin F attenuates neuroinflammation and demyelination following murine coronavirus infection of the central nervous system

Amber R. Syage, Collin Pachow, Kaitlin M. Murray, Caden Henningfield, Kellie Fernandez, Annie Du, Yuting Cheng, Gema Olivarria, Shimako Kawauchi, Grant R. MacGregor, Kim N. Green, Thomas E. Lane

J Neuroinflammation. 2024; 21: 157. Published online 2024 Jun 15. doi: 10.1186/s12974-024-03153-0

PMCID:: PMC11179388

Abstract Article PDF–6.4M

Select item 107157282.

Cystatin F (Cst7) drives sex-dependent changes in microglia in an amyloid-driven model of Alzheimer’s disease

Michael JD Daniels, Lucas Lefevre, Stefan Szymkowiak, Alice Drake, Laura McCulloch, Makis Tzioras, Jack Barrington, Owen R Dando, Xin He, Mehreen Mohammad, Hiroki Sasaguri, Takashi Saito, Takaomi C Saido, Tara L Spires-Jones, Barry W McColl

eLife. 2023; 12: e85279. Published online 2023 Dec 12. doi: 10.7554/eLife.85279

PMCID:: PMC10715728

Abstract Article PDF–13M

Select item 59315593.

Cystatin F involvement in adenosine A_2A receptor-mediated neuroinflammation in BV2 microglial cells

Wei Duan, Haoxiang Wang, Qinlin Fan, Lin Chen, Heqing Huang, Hong Ran

Sci Rep. 2018; 8: 6820. Published online 2018 May 1. doi: 10.1038/s41598-018-25031-5

PMCID:: PMC5931559

Abstract Article PDF–3.4M

Select item 56427274.

RIPK1 mediates a disease-associated microglial response in Alzheimer’s disease

Dimitry Ofengeim, Sonia Mazzitelli, Yasushi Ito, Judy Park DeWitt, Lauren Mifflin, Chengyu Zou, Sudeshna Das, Xian Adiconis, Hongbo Chen, Hong Zhu, Michelle A. Kelliher, Joshua Z. Levin, Junying Yuan

Proc Natl Acad Sci U S A. 2017 Oct 10; 114(41): E8788–E8797. Published online 2017 Sep 13. doi: 10.1073/pnas.1714175114

PMCID:: PMC5642727

Abstract Article PDF–1.4M

Select item 52982865.

Cystatin F is a biomarker of prion pathogenesis in mice

Mario Nuvolone, Nicolas Schmid, Gino Miele, Silvia Sorce, Rita Moos, Christian Schori, Roger R. Beerli, Monika Bauer, Philippe Saudan, Klaus Dietmeier, Ingolf Lachmann, Michael Linnebank, Roland Martin, Ulf Kallweit, Veronika Kana, Elisabeth J. Rushing, Herbert Budka, Adriano Aguzzi

PLoS One. 2017; 12(2): e0171923. Published online 2017 Feb 8. doi: 10.1371/journal.pone.0171923

PMCID:: PMC5298286

Abstract Article PDF–3.4M

Select item 51753976.

Disinhibition of Cathepsin C Caused by Cystatin F Deficiency Aggravates the Demyelination in a Cuprizone Model

Junjie Liang, Ning Li, Yanli Zhang, Changyi Hou, Xiaohan Yang, Takahiro Shimizu, Xiaoyu Wang, Kazuhiro Ikenaka, Kai Fan, Jianmei Ma

Front Mol Neurosci. 2016; 9: 152. Published online 2016 Dec 21. doi: 10.3389/fnmol.2016.00152

Correction in:: Front Mol Neurosci. 2018; 11: 115.

PMCID:: PMC5175397

Abstract Article PDF–4.2M

Select item 35724107.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 35275708.

Adenosine A2A Receptor Deficiency Up-Regulates Cystatin F Expression in White Matter Lesions Induced by Chronic Cerebral Hypoperfusion

Wei Duan, Hong Ran, Zhujuan Zhou, Qifen He, Jian Zheng

PLoS One. 2012; 7(12): e52566. Published online 2012 Dec 20. doi: 10.1371/journal.pone.0052566

PMCID:: PMC3527570

Abstract Article PDF–631K

Select item 32349469.

Internalization of Exogenous Cystatin F Supresses Cysteine Proteases and Induces the Accumulation of Single-chain Cathepsin L by Multiple Mechanisms

Jeff D. Colbert, Stephen P. Matthews, Janko Kos, Colin Watts

J Biol Chem. 2011 Dec 9; 286(49): 42082–42090. Published online 2011 Sep 28. doi: 10.1074/jbc.M111.253914

PMCID:: PMC3234946

Abstract Article PDF–2.0M

Select item 317805910.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253411.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 224165112.

Cystatin F is a cathepsin C-directed protease inhibitor regulated by proteolysis

Garth Hamilton, Jeff D Colbert, Alexander W Schuettelkopf, Colin Watts

EMBO J. 2008 Feb 6; 27(3): 499–508. doi: 10.1038/sj.emboj.7601979

PMCID:: PMC2241651

Abstract Article PDF–1.8M

Select item 31099213.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098014.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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