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Select item 101589991.

Intron dynamics reveal principles of gene regulation during the maternal-to-zygotic transition

Kent Riemondy, Jesslyn C. Henriksen, Olivia S. Rissland

RNA. 2023 May; 29(5): 596–608. doi: 10.1261/rna.079168.122

PMCID:: PMC10158999

Abstract Article PDF–2.1M

Select item 101057362.

Next-generation large-scale binary protein interaction network for Drosophila melanogaster

Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr

Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0

PMCID:: PMC10105736

Abstract Article PDF–3.2M

Select item 100818473.

The histone demethylase Kdm3 prevents auto-immune piRNAs production in Drosophila

Karine Casier, Julie Autaa, Nathalie Gueguen, Valérie Delmarre, Pauline P. Marie, Stéphane Ronsseray, Clément Carré, Emilie Brasset, Laure Teysset, Antoine Boivin

Sci Adv. 2023 Apr; 9(14): eade3872. Published online 2023 Apr 7. doi: 10.1126/sciadv.ade3872

PMCID:: PMC10081847

Abstract Article PDF–1.7M

Select item 86644864.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 83190525.

RNA degradation is required for the germ-cell to maternal transition in Drosophila

Patrick Blatt, Siu Wah Wong-Deyrup, Alicia McCarthy, Shane Breznak, Matthew D. Hurton, Maitreyi Upadhyay, Benjamin Bennink, Justin Camacho, Miler T. Lee, Prashanth Rangan

Curr Biol. Author manuscript; available in PMC 2021 Jul 29.

Published in final edited form as: Curr Biol. 2021 Jul 26; 31(14): 2984–2994.e7. Published online 2021 May 13. doi: 10.1016/j.cub.2021.04.052

PMCID:: PMC8319052

Abstract Article PDF–2.2M

Select item 81436446.

An Interaction Network of RNA-Binding Proteins Involved in Drosophila Oogenesis

Prashali Bansal, Johannes Madlung, Kristina Schaaf, Boris Macek, Fulvia Bono

Mol Cell Proteomics. 2020 Sep; 19(9): 1485–1502. Published online 2020 Nov 25. doi: 10.1074/mcp.RA119.001912

PMCID:: PMC8143644

Abstract Article PDF–4.1M

Select item 80456897.

Proper CycE–Cdk2 activity in endocycling tissues requires regulation of the cyclin-dependent kinase inhibitor Dacapo by dE2F1b in Drosophila

Minhee Kim, Keemo Delos Santos, Nam-Sung Moon

Genetics. 2021 Jan; 217(1): 1–15. Published online 2020 Dec 22. doi: 10.1093/genetics/iyaa029

PMCID:: PMC8045689

Abstract Article PDF–1.7M

Select item 77206778.

Defective Hfp-dependent transcriptional repression of dMYC is fundamental to tissue overgrowth in Drosophila XPB models

Jue Er Amanda Lee, Naomi C. Mitchell, Olga Zaytseva, Arjun Chahal, Peter Mendis, Amandine Cartier-Michaud, Linda M. Parsons, Gretchen Poortinga, David L. Levens, Ross D. Hannan, Leonie M. Quinn

Nat Commun. Author manuscript; available in PMC 2020 Dec 7.

Published in final edited form as: Nat Commun. 2015 Jun 15; 6: 7404. Published online 2015 Jun 15. doi: 10.1038/ncomms8404

PMCID:: PMC7720677

Abstract Article PDF–2.9M

Select item 73061799.

Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons

Anne L. Sapiro, Emily C. Freund, Lucas Restrepo, Huan-Huan Qiao, Amruta Bhate, Qin Li, Jian-Quan Ni, Timothy J. Mosca, Jin Billy Li

Cell Rep. Author manuscript; available in PMC 2020 Jun 21.

Published in final edited form as: Cell Rep. 2020 May 19; 31(7): 107654. doi: 10.1016/j.celrep.2020.107654

PMCID:: PMC7306179

Abstract Article PDF–2.1M

Select item 696157810.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 650862111.

Satellite DNA-containing gigantic introns in a unique gene expression program during Drosophila spermatogenesis

Jaclyn M. Fingerhut, Jessica V. Moran, Yukiko M. Yamashita

PLoS Genet. 2019 May; 15(5): e1008028. Published online 2019 May 9. doi: 10.1371/journal.pgen.1008028

PMCID:: PMC6508621

Abstract Article PDF–5.0M

Select item 619650512.

Modulation of the Hippo pathway and organ growth by RNA processing proteins

Jana Mach, Mardelle Atkins, Kathleen M. Gajewski, Violaine Mottier-Pavie, Leticia Sansores-Garcia, Jun Xie, Robert Andrew Mills, Weronika Kowalczyk, Leen Van Huffel, Gordon B. Mills, Georg Halder

Proc Natl Acad Sci U S A. 2018 Oct 16; 115(42): 10684–10689. Published online 2018 Sep 26. doi: 10.1073/pnas.1807325115

PMCID:: PMC6196505

Abstract Article PDF–2.5M

Select item 570780513.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900214.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 550138615.

FUBP/KH domain proteins in transcription: Back to the future

Leonie M. Quinn

Transcription. 2017; 8(3): 185–192. Published online 2017 Feb 16. doi: 10.1080/21541264.2017.1293595

PMCID:: PMC5501386

Abstract Article PDF–492K

Select item 540686516.

Controlling the Master: Chromatin Dynamics at the MYC Promoter Integrate Developmental Signaling

Olga Zaytseva, Leonie M. Quinn

Genes (Basel) 2017 Apr; 8(4): 118. Published online 2017 Apr 11. doi: 10.3390/genes8040118

PMCID:: PMC5406865

Abstract Article PDF–1.8M

Select item 539272317.

The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-binding Modes to Diversify Target Recognition

Joel V. Tamayo, Takamasa Teramoto, Seema Chatterjee, Traci M. Tanaka Hall, Elizabeth R. Gavis

Cell Rep. Author manuscript; available in PMC 2017 Apr 17.

Published in final edited form as: Cell Rep. 2017 Apr 4; 19(1): 150–161. doi: 10.1016/j.celrep.2017.03.022

PMCID:: PMC5392723

Abstract Article PDF–914K

Select item 511784118.

Genetic dissection of intraspecific variation in a male-specific sexual trait in Drosophila melanogaster

K M Cloud-Richardson, B R Smith, S J Macdonald

Heredity (Edinb) 2016 Dec; 117(6): 417–426. Published online 2016 Aug 17. doi: 10.1038/hdy.2016.63

PMCID:: PMC5117841

Abstract Article PDF–472K

Select item 503306119.

An integrative analysis of the InR/PI3K/Akt network identifies the dynamic response to Insulin signaling

Arunachalam Vinayagam, Meghana M. Kulkarni, Richelle Sopko, Xiaoyun Sun, Yanhui Hu, Ankita Nand, Christians Villalta, Ahmadali Moghimi, Xuemei Yang, Stephanie E. Mohr, Pengyu Hong, John Asara, Norbert Perrimon

Cell Rep. Author manuscript; available in PMC 2016 Sep 22.

Published in final edited form as: Cell Rep. 2016 Sep 13; 16(11): 3062–3074. doi: 10.1016/j.celrep.2016.08.029

PMCID:: PMC5033061

Abstract Article PDF–3.3M

Select item 502578220.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

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