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Select item 108162821.

The Lifespan of D. melanogaster Depends on the Function of the Gagr Gene, a Domesticated gag Gene of Drosophila LTR Retrotransposons

Yevgenia Balakireva, Maria Nikitina, Pavel Makhnovskii, Inna Kukushkina, Ilya Kuzmin, Alexander Kim, Lidia Nefedova

Insects. 2024 Jan; 15(1): 68. Published online 2024 Jan 17. doi: 10.3390/insects15010068

PMCID:: PMC10816282

Abstract Article PDF–4.1M

Select item 107044872.

Single-cell transcriptomics illuminates regulatory steps driving anterior-posterior patterning of Drosophila embryonic mesoderm

Jingjing Sun, Chen Zhang, Fan Gao, Angelike Stathopoulos

Cell Rep. Author manuscript; available in PMC 2023 Dec 8.

Published in final edited form as: Cell Rep. 2023 Oct 31; 42(10): 113289. Published online 2023 Oct 19. doi: 10.1016/j.celrep.2023.113289

PMCID:: PMC10704487

Abstract Article PDF–2.8M

Select item 100720673.

Phenotypic and transcriptomic impact of expressing mammalian TET2 in the Drosophila melanogaster model

Joy N. Ismail, Sarah Mantash, Mohammad Hallal, Nada Jabado, Pierre Khoueiry, Margret Shirinian

Epigenetics. 2023; 18(1): 2192375. Published online 2023 Mar 29. doi: 10.1080/15592294.2023.2192375

PMCID:: PMC10072067

Abstract Article PDF–8.4M

Select item 80456984.

Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection

Rosa M Guzman, Zachary P Howard, Ziying Liu, Ryan D Oliveira, Alisha T Massa, Anders Omsland, Stephen N White, Alan G Goodman

Genetics. 2021 Mar; 217(3): iyab005. Published online 2021 Jan 23. doi: 10.1093/genetics/iyab005

PMCID:: PMC8045698

Abstract Article PDF–695K

Select item 78860705.

Form and function of the apical extracellular matrix: new insights from Caenorhabditis elegans, Drosophila melanogaster, and the vertebrate inner ear

Sherry Li Zheng, Jennifer Gotenstein Adams, Andrew D Chisholm

Fac Rev. 2020; 9: 27. Published online 2020 Dec 22. doi: 10.12703/r/9-27

PMCID:: PMC7886070

Abstract Article PDF–2.8M

Select item 64859566.

A Comprehensive Drosophila melanogaster Transcription Factor Interactome

Leila Shokri, Sachi Inukai, Antonina Hafner, Kathryn Weinand, Korneel Hens, Anastasia Vedenko, Stephen S. Gisselbrecht, Riccardo Dainese, Johannes Bischof, Edy Furger, Jean-Daniel Feuz, Konrad Basler, Bart Deplancke, Martha L. Bulyk

Cell Rep. Author manuscript; available in PMC 2019 Apr 26.

Published in final edited form as: Cell Rep. 2019 Apr 16; 27(3): 955–970.e7. doi: 10.1016/j.celrep.2019.03.071

PMCID:: PMC6485956

Abstract Article PDF–1.6M

Select item 61772577.

Generation of a versatile BiFC ORFeome library for analyzing protein–protein interactions in live Drosophila

Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, Solene Vanderperre, Rachel Paul, Mikael Björklund, Damien Ahr, Alexis W Ahmed, Lionel Spinelli, Christine Brun, Konrad Basler, Samir Merabet

eLife. 2018; 7: e38853. Published online 2018 Sep 24. doi: 10.7554/eLife.38853

PMCID:: PMC6177257

Abstract Article PDF–4.9M

Select item 57748278.

An Ichor-dependent apical extracellular matrix regulates seamless tube shape and integrity

Jeffrey B. Rosa, Mark M. Metzstein, Amin S. Ghabrial

PLoS Genet. 2018 Jan; 14(1): e1007146. Published online 2018 Jan 8. doi: 10.1371/journal.pgen.1007146

PMCID:: PMC5774827

Abstract Article PDF–37M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 506885010.

Mitochondrial-Nuclear Interactions Mediate Sex-Specific Transcriptional Profiles in Drosophila

Jim A. Mossman, Jennifer G. Tross, Nan Li, Zhijin Wu, David M. Rand

Genetics. 2016 Oct; 204(2): 613–630. Published online 2016 Aug 24. doi: 10.1534/genetics.116.192328

PMCID:: PMC5068850

Abstract Article PDF–12M

Select item 452833011.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832912.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288713.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152714.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 366772715.

Normal dynactin complex function during synapse growth in Drosophila requires membrane binding by Arfaptin

Leo Chang, Tabita Kreko, Holly Davison, Tim Cusmano, Yimin Wu, Adrian Rothenfluh, Benjamin A. Eaton

Mol Biol Cell. 2013 Jun 1; 24(11): 1749–1764. doi: 10.1091/mbc.E12-09-0697

PMCID:: PMC3667727

Abstract Article PDF–5.9M

Select item 353067716.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 346946717.

The Many Landscapes of Recombination in Drosophila melanogaster

Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin

PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905

PMCID:: PMC3469467

Abstract Article PDF–1.6M

Select item 313128418.

A Systematic Screen for Tube Morphogenesis and Branching Genes in the Drosophila Tracheal System

Amin S. Ghabrial, Boaz P. Levi, Mark A. Krasnow

PLoS Genet. 2011 Jul; 7(7): e1002087. Published online 2011 Jul 7. doi: 10.1371/journal.pgen.1002087

PMCID:: PMC3131284

Abstract Article PDF–4.2M

Select item 304044119.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 284143520.

BREs mediate both repression and activation of oskar mRNA translation and act in trans

Brad Reveal, Nan Yan, Mark J. Snee, Chin-I Pai, Youme Gim, Paul M. Macdonald

Dev Cell. Author manuscript; available in PMC 2011 Mar 16.

Published in final edited form as: Dev Cell. 2010 Mar 16; 18(3): 496–502. doi: 10.1016/j.devcel.2009.12.021

PMCID:: PMC2841435

Abstract Article PDF–720K

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