PMC Links for GEO Profiles (Select 39752241) - PMC

Select item 105234691.

An intraflagellar transport dependent negative feedback regulates the MAPKKK DLK-1 to protect cilia from degeneration

Yue Sun, Yishi Jin

Proc Natl Acad Sci U S A. 2023 Sep 26; 120(39): e2302801120. Published online 2023 Sep 18. doi: 10.1073/pnas.2302801120

PMCID:: PMC10523469

Select item 103082442.

mScarlet and split fluorophore mScarlet resources for plasmid-based CRISPR/Cas9 knock-in in C. elegans

Gillian Witten, Ella DeMott, George Huang, Francis Zelasko, Bailey de Jesus, Chandi Mulchand, Liam Schuck, Stephen Pullman, Amelie Perez, Priya Mahableshwarkar, Zheng Wu, Eric Andrew Cardona, Jonathan T Pierce, Daniel J Dickinson, Ryan Doonan

MicroPubl Biol. 2023; 2023: 10.17912/micropub.biology.000871. Published online 2023 Jun 14. doi: 10.17912/micropub.biology.000871

PMCID:: PMC10308244

Abstract Article PDF–13M

Select item 101053283.

Yolk-deprived Caenorhabditis elegans secure brood size at the expense of competitive fitness

Ellen Geens, Pieter Van de Walle, Francesca Caroti, Rob Jelier, Christian Steuwe, Liliane Schoofs, Liesbet Temmerman

Life Sci Alliance. 2023 Jun; 6(6): e202201675. Published online 2023 Apr 14. doi: 10.26508/lsa.202201675

PMCID:: PMC10105328

Abstract Article PDF–2.0M

Select item 100858014.

Experimental considerations for study of C. elegans lysosomal proteins

John C Clancy, An A Vo, Krista M Myles, Max T Levenson, James Matthew Ragle, Jordan D Ward

G3 (Bethesda) 2023 Apr; 13(4): jkad032. Published online 2023 Feb 7. doi: 10.1093/g3journal/jkad032

PMCID:: PMC10085801

Abstract Article PDF–1.0M

Select item 100234445.

A membrane reticulum, the centriculum, affects centrosome size and function in Caenorhabditis elegans

Richa Maheshwari, Mohammad M. Rahman, Seth Drey, Megan Onyundo, Gunar Fabig, Michael A. Q. Martinez, David Q. Matus, Thomas Müller-Reichert, Orna Cohen-Fix

Curr Biol. Author manuscript; available in PMC 2024 Mar 13.

Published in final edited form as: Curr Biol. 2023 Mar 13; 33(5): 791–806.e7. Published online 2023 Jan 23. doi: 10.1016/j.cub.2022.12.059

PMCID:: PMC10023444

Abstract Article PDF–3.6M

Select item 99562696.

A Chemoptogenetic Tool for Spatiotemporal Induction of Oxidative DNA Lesions In Vivo

Suhao Han, Austin Sims, Anthony Aceto, Brigitte F. Schmidt, Marcel P. Bruchez, Aditi U. Gurkar

Genes (Basel) 2023 Feb; 14(2): 485. Published online 2023 Feb 14. doi: 10.3390/genes14020485

PMCID:: PMC9956269

Abstract Article PDF–2.7M

Select item 97984727.

Reprogramming the piRNA pathway for multiplexed and transgenerational gene silencing in C. elegans

Monika Priyadarshini, Julie Zhouli Ni, Amhed M. Vargas-Velazquez, Sam Guoping Gu, Christian Frøkjær-Jensen

Nat Methods. Author manuscript; available in PMC 2022 Dec 29.

Published in final edited form as: Nat Methods. 2022 Feb; 19(2): 187–194. Published online 2022 Feb 3. doi: 10.1038/s41592-021-01369-z

PMCID:: PMC9798472

Abstract Article PDF–4.2M

Select item 96411408.

Initial characterization of gap phase introduction in every cell cycle of C. elegans embryogenesis

Ming-Kin Wong, Vincy Wing Sze Ho, Xiaotai Huang, Lu-Yan Chan, Dongying Xie, Runsheng Li, Xiaoliang Ren, Guoye Guan, Yiming Ma, Boyi Hu, Hong Yan, Zhongying Zhao

Front Cell Dev Biol. 2022; 10: 978962. Published online 2022 Oct 25. doi: 10.3389/fcell.2022.978962

PMCID:: PMC9641140

Abstract Article PDF–3.3M

Select item 95260539.

The mIAA7 degron improves auxin-mediated degradation in Caenorhabditis elegans

Jorian J Sepers, Noud H M Verstappen, An A Vo, James Matthew Ragle, Suzan Ruijtenberg, Jordan D Ward, Mike Boxem

G3 (Bethesda) 2022 Oct; 12(10): jkac222. Published online 2022 Aug 27. doi: 10.1093/g3journal/jkac222

PMCID:: PMC9526053

Abstract Article PDF–1.0M

Select item 917078310.

SGPL1 stimulates VPS39 recruitment to the mitochondria in MICU1 deficient cells

Joshua Jackson, Lena Wischhof, Enzo Scifo, Anna Pellizzer, Yiru Wang, Antonia Piazzesi, Debora Gentile, Sana Siddig, Miriam Stork, Chris E. Hopkins, Kristian Händler, Joachim Weis, Andreas Roos, Joachim L. Schultze, Pierluigi Nicotera, Dan Ehninger, Daniele Bano

Mol Metab. 2022 Jul; 61: 101503. Published online 2022 Apr 19. doi: 10.1016/j.molmet.2022.101503

PMCID:: PMC9170783

Abstract Article PDF–3.7M

Select item 906607411.

CEST‐2.2 overexpression alters lipid metabolism and extends longevity of mitochondrial mutants

Antonia Piazzesi, Yiru Wang, Joshua Jackson, Lena Wischhof, Viktoria Zeisler‐Diehl, Enzo Scifo, Ina Oganezova, Thorben Hoffmann, Pablo Gómez Martín, Fabio Bertan, Chester J J Wrobel, Frank C Schroeder, Dan Ehninger, Kristian Händler, Joachim L Schultze, Lukas Schreiber, Gerhild van Echten‐Deckert, Pierluigi Nicotera, Daniele Bano

EMBO Rep. 2022 May; 23(5): e52606. Published online 2022 Mar 17. doi: 10.15252/embr.202152606

PMCID:: PMC9066074

Abstract Article PDF–4.8M

Select item 848203312.

Endogenous expression and localization of HIS-72::mTurquoise2 in C. elegans

Dillon E. Sloan, Joshua N. Bembenek

MicroPubl Biol. 2021; 2021: 10.17912/micropub.biology.000471. Published online 2021 Sep 29. doi: 10.17912/micropub.biology.000471

PMCID:: PMC8482033

Abstract Article PDF–8.5M

Select item 621659013.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 310207714.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 283131215.

A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans

Siew Loon Ooi, Jorja G. Henikoff, Steven Henikoff

Nucleic Acids Res. 2010 Mar; 38(4): e26. Published online 2009 Dec 4. doi: 10.1093/nar/gkp1090

PMCID:: PMC2831312

Abstract Article PDF–6.3M

Select item 266521616.

Mitochondrial DNA level, but not active replicase, is essential for Caenorhabditis elegans development

Ivana Bratic, Jürgen Hench, Johan Henriksson, Adam Antebi, Thomas R Bürglin, Aleksandra Trifunovic

Nucleic Acids Res. 2009 Apr; 37(6): 1817–1828. Published online 2009 Jan 30. doi: 10.1093/nar/gkp018

PMCID:: PMC2665216

Abstract Article PDF–2.3M

Select item 186341917.

Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity

Julian Ceron, Jean-François Rual, Abha Chandra, Denis Dupuy, Marc Vidal, Sander van den Heuvel

BMC Dev Biol. 2007; 7: 30. Published online 2007 Apr 6. doi: 10.1186/1471-213X-7-30

PMCID:: PMC1863419

Abstract Article PDF–1.4M

Select item 169894918.

A Map of the Interactome Network of the Metazoan C. elegans

Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2006 Dec 14.

Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403

PMCID:: PMC1698949

Abstract Article PDF–1.4M

Select item 148459919.

Histone H3.3 Variant Dynamics in the Germline of Caenorhabditis elegans

Siew Loon Ooi, James R Priess, Steven Henikoff

PLoS Genet. 2006 Jun; 2(6): e97. Published online 2006 Jun 30. doi: 10.1371/journal.pgen.0020097

PMCID:: PMC1484599

Abstract Article PDF–792K

Select item 108828920.

Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression

Julius Halaschek-Wiener, Jaswinder S. Khattra, Sheldon McKay, Anatoli Pouzyrev, Jeff M. Stott, George S. Yang, Robert A. Holt, Steven J.M. Jones, Marco A. Marra, Angela R. Brooks-Wilson, Donald L. Riddle

Genome Res. 2005 May; 15(5): 603–615. doi: 10.1101/gr.3274805

PMCID:: PMC1088289

Abstract Article PDF–632K

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