PMC Links for GEO Profiles (Select 39789547) - PMC

Select item 101231041.

YbiB: a novel interactor of the GTPase ObgE

Babette Deckers, Silke Vercauteren, Veerke De Kock, Charlotte Martin, Tamas Lazar, Pauline Herpels, Liselot Dewachter, Natalie Verstraeten, Eveline Peeters, Steven Ballet, Jan Michiels, Christian Galicia, Wim Versées

Nucleic Acids Res. 2023 Apr 24; 51(7): 3420–3435. Published online 2023 Mar 2. doi: 10.1093/nar/gkad127

PMCID:: PMC10123104

Abstract Article PDF–2.9M

Select item 63668612.

Affinity-based capture and identification of protein effectors of the growth regulator ppGpp

Boyuan Wang, Peng Dai, David Ding, Amanda Del Rosario, Robert A. Grant, Bradley L. Pentelute, Michael T. Laub

Nat Chem Biol. Author manuscript; available in PMC 2019 Jun 17.

Published in final edited form as: Nat Chem Biol. 2019 Feb; 15(2): 141–150. Published online 2018 Dec 17. doi: 10.1038/s41589-018-0183-4

Correction in:: Nat Chem Biol. 2019 May 10

PMCID:: PMC6366861

Abstract Article PDF–2.2M

Select item 53925793.

Structural and biochemical analysis of Escherichia coli ObgE, a central regulator of bacterial persistence

Sotirios Gkekas, Ranjan Kumar Singh, Alexander V. Shkumatov, Joris Messens, Maarten Fauvart, Natalie Verstraeten, Jan Michiels, Wim Versées

J Biol Chem. 2017 Apr 7; 292(14): 5871–5883. Published online 2017 Feb 21. doi: 10.1074/jbc.M116.761809

PMCID:: PMC5392579

Abstract Article PDF–2.3M

Select item 49071114.

Coexpression of Escherichia coli obgE, Encoding the Evolutionarily Conserved Obg GTPase, with Ribosomal Proteins L21 and L27

Rim Maouche, Hector L. Burgos, Laetitia My, Julie P. Viala, Richard L. Gourse, Emmanuelle Bouveret

J Bacteriol. 2016 Jul 1; 198(13): 1857–1867. Prepublished online 2016 May 2. Published online 2016 Jun 13. doi: 10.1128/JB.00159-16

PMCID:: PMC4907111

Abstract Article PDF–1.8M

Select item 47018335.

A Single-Amino-Acid Substitution in Obg Activates a New Programmed Cell Death Pathway in Escherichia coli

Liselot Dewachter, Natalie Verstraeten, Daniel Monteyne, Cyrielle Ines Kint, Wim Versées, David Pérez-Morga, Jan Michiels, Maarten Fauvart

mBio. 2015 Nov-Dec; 6(6): e01935-15. Published online 2015 Dec 22. doi: 10.1128/mBio.01935-15

PMCID:: PMC4701833

Abstract Article PDF–865K

Select item 41238556.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 40281867.

Structural and Functional Insights into the Mode of Action of a Universally Conserved Obg GTPase

Boya Feng, Chandra Sekhar Mandava, Qiang Guo, Jie Wang, Wei Cao, Ningning Li, Yixiao Zhang, Yanqing Zhang, Zhixin Wang, Jiawei Wu, Suparna Sanyal, Jianlin Lei, Ning Gao

PLoS Biol. 2014 May; 12(5): e1001866. Published online 2014 May 20. doi: 10.1371/journal.pbio.1001866

PMCID:: PMC4028186

Abstract Article PDF–1.7M

Select item 27713468.

The ObgE/CgtA GTPase influences the stringent response to amino acid starvation in Escherichia coli

Nicole S. Persky, Daniel J. Ferullo, Deani L. Cooper, Hayley R. Moore, Susan T. Lovett

Mol Microbiol. Author manuscript; available in PMC 2010 Jul 1.

Published in final edited form as: Mol Microbiol. 2009 Jul; 73(2): 253–266. Published online 2009 Jun 23. doi: 10.1111/j.1365-2958.2009.06767.x

PMCID:: PMC2771346

Abstract Article PDF–1.0M

Select item 27461629.

A Role for Nonessential Domain II of Initiator Protein, DnaA, in Replication Control

Kathryn L. Molt, Vincent A. Sutera, Jr., Kathryn K. Moore, Susan T. Lovett

Genetics. 2009 Sep; 183(1): 39–49. doi: 10.1534/genetics.109.104760

PMCID:: PMC2746162

Abstract Article PDF–1.1M

Select item 267261410.

Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins

Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J. Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili

PLoS Biol. 2009 Apr; 7(4): e1000096. Published online 2009 Apr 28. doi: 10.1371/journal.pbio.1000096

PMCID:: PMC2672614

Abstract Article

Select item 229217711.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 221170612.

Functional analysis of the GTPases EngA and YhbZ encoded by Salmonella typhimurium

Heather K. Lamb, Paul Thompson, Catherine Elliott, Ian G. Charles, Jamie Richards, Michael Lockyer, Nicholas Watkins, Charles Nichols, David K. Stammers, Clive R. Bagshaw, Alan Cooper, Alastair R. Hawkins

Protein Sci. 2007 Nov; 16(11): 2391–2402. doi: 10.1110/ps.072900907

PMCID:: PMC2211706

Abstract Article PDF–457K

Select item 195194213.

G-Protein Control of the Ribosome-Associated Stress Response Protein SpoT

Mengxi Jiang, Susan M. Sullivan, Patrice K. Wout, Janine R. Maddock

J Bacteriol. 2007 Sep; 189(17): 6140–6147. Published online 2007 Jul 6. doi: 10.1128/JB.00315-07

PMCID:: PMC1951942

Abstract Article PDF–243K

Select item 168148214.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 168148115.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 159551316.

The Escherichia coli GTPase CgtA_E Is Involved in Late Steps of Large Ribosome Assembly

Mengxi Jiang, Kaustuv Datta, Angela Walker, John Strahler, Pia Bagamasbad, Philip C. Andrews, Janine R. Maddock

J Bacteriol. 2006 Oct; 188(19): 6757–6770. doi: 10.1128/JB.00444-06

PMCID:: PMC1595513

Abstract Article PDF–369K

Select item 132520017.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 49089218.

The Escherichia coli GTPase CgtA_E Cofractionates with the 50S Ribosomal Subunit and Interacts with SpoT, a ppGpp Synthetase/Hydrolase

P. Wout, K. Pu, S. M. Sullivan, V. Reese, S. Zhou, B. Lin, J. R. Maddock

J Bacteriol. 2004 Aug; 186(16): 5249–5257. doi: 10.1128/JB.186.16.5249-5257.2004

PMCID:: PMC490892

Abstract Article PDF–726K

Select item 37431719.

Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli

Jaya K. Kumar, Stanley Tabor, Charles C. Richardson

Proc Natl Acad Sci U S A. 2004 Mar 16; 101(11): 3759–3764. Published online 2004 Mar 2. doi: 10.1073/pnas.0308701101

PMCID:: PMC374317

Abstract Article PDF–397K

Select item 13501120.

Overexpression of Two Different GTPases Rescues a Null Mutation in a Heat-Induced rRNA Methyltransferase

Jacqueline Tan, Ursula Jakob, James C. A. Bardwell

J Bacteriol. 2002 May; 184(10): 2692–2698. doi: 10.1128/JB.184.10.2692-2698.2002

PMCID:: PMC135011

Abstract Article PDF–216K

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