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Items: 1 to 20 of 22

1.
Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase
Kosuke Ito, Ryo Murakami, Masahiro Mochizuki, Hao Qi, Yoshihiro Shimizu, Kin-ichiro Miura, Takuya Ueda, Toshio Uchiumi
Nucleic Acids Res. 2012 Nov; 40(20): 10521–10531. Published online 2012 Aug 24. doi: 10.1093/nar/gks790
PMCID:
PMC3488237
AbstractArticlePDF–7.8M
2.
Crystallization and preliminary X-ray analysis of peptidyl-tRNA hydrolase from Escherichia coli in complex with the acceptor-TΨC domain of tRNA
Kosuke Ito, Hao Qi, Yoshihiro Shimizu, Ryo Murakami, Kin-ichiro Miura, Takuya Ueda, Toshio Uchiumi
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1; 67(Pt 12): 1566–1569. Published online 2011 Nov 26. doi: 10.1107/S1744309111038383
PMCID:
PMC3232141
AbstractArticlePDF–412K
3.
Transient Erythromycin Resistance Phenotype Associated with Peptidyl-tRNA Drop-Off on Early UGG and GGG Codons
Mirjana Mačvanin, Ernesto I. Gonzalez de Valdivia, David H. Ardell, Leif A. Isaksson
J Bacteriol. 2007 Dec; 189(24): 8993–9000. Published online 2007 Oct 19. doi: 10.1128/JB.01004-07
PMCID:
PMC2168611
AbstractArticlePDF–192K
4.
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori
Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050
PMCID:
PMC1681482
AbstractArticlePDF–400K
5.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
6.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
7.
Excess of charged tRNALys maintains low levels of peptidyl-tRNA hydrolase in pth(Ts) mutants at a non-permissive temperature
Serafin Vivanco-Domínguez, Luis Rogelio Cruz-Vera, Gabriel Guarneros
Nucleic Acids Res. 2006; 34(5): 1564–1570. Published online 2006 Mar 15. doi: 10.1093/nar/gkl046
PMCID:
PMC1408313
AbstractArticlePDF–444K
8.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
9.
Ribosome release factor RF4 and termination factor RF3 are involved in dissociation of peptidyl-tRNA from the ribosome.
V Heurgué-Hamard, R Karimi, L Mora, J MacDougall, C Leboeuf, G Grentzmann, M Ehrenberg, R H Buckingham
EMBO J. 1998 Feb 2; 17(3): 808–816. doi: 10.1093/emboj/17.3.808
PMCID:
PMC1170429
SummaryPDF–327K
10.
Crystal structure at 1.2 A resolution and active site mapping of Escherichia coli peptidyl-tRNA hydrolase.
E Schmitt, Y Mechulam, M Fromant, P Plateau, S Blanquet
EMBO J. 1997 Aug 1; 16(15): 4760–4769. doi: 10.1093/emboj/16.15.4760
PMCID:
PMC1170102
SummaryPDF–714K
11.
A physiological connection between tmRNA and peptidyl-tRNA hydrolase functions in Escherichia coli
Nongmaithem Sadananda Singh, Umesh Varshney
Nucleic Acids Res. 2004; 32(20): 6028–6037. Published online 2004 Nov 16. doi: 10.1093/nar/gkh924
PMCID:
PMC534616
AbstractArticlePDF–345K
12.
Evidence of bar Minigene Expression and equation M1Sequestration as equation M2during Lambda Bacteriophage Development
Norma Angélica Oviedo de Anda, Luis Kameyama, José Manuel Galindo, Gabriel Guarneros, Javier Hernandez-Sanchez
J Bacteriol. 2004 Aug; 186(16): 5533–5537. doi: 10.1128/JB.186.16.5533-5537.2004
PMCID:
PMC490872
AbstractArticlePDF–226K
13.
Peptidyl-tRNA hydrolase is involved in lambda inhibition of host protein synthesis.
M R García-Villegas, F M De La Vega, J M Galindo, M Segura, R H Buckingham, G Guarneros
EMBO J. 1991 Nov; 10(11): 3549–3555. doi: 10.1002/j.1460-2075.1991.tb04919.x
PMCID:
PMC453084
SummaryPage BrowsePDF–1.4M
14.
The growth defect in Escherichia coli deficient in peptidyl-tRNA hydrolase is due to starvation for Lys-tRNA(Lys).
V Heurgué-Hamard, L Mora, G Guarneros, R H Buckingham
EMBO J. 1996 Jun 3; 15(11): 2826–2833.
PMCID:
PMC450220
SummaryPage BrowsePDF–1.7M
15.
The influence of the peptide chain length on the activity of peptidyl-tRNA hydrolase from E. coli.
J Shiloach, S Bauer, N de Groot, Y Lapidot
Nucleic Acids Res. 1975 Oct; 2(10): 1941–1950. doi: 10.1093/nar/2.10.1941
PMCID:
PMC343558
SummaryPage BrowsePDF–685K
16.
Role of the 1-72 base pair in tRNAs for the activity of Escherichia coli peptidyl-tRNA hydrolase.
S Dutka, T Meinnel, C Lazennec, Y Mechulam, S Blanquet
Nucleic Acids Res. 1993 Aug 25; 21(17): 4025–4030. doi: 10.1093/nar/21.17.4025
PMCID:
PMC309993
SummaryPage BrowsePDF–1.0M
17.
Accumulation of peptidyl tRNA is lethal to Escherichia coli.
J R Menninger
J Bacteriol. 1979 Jan; 137(1): 694–696. doi: 10.1128/jb.137.1.694-696.1979
PMCID:
PMC218507
SummaryPage BrowsePDF–374K
18.
Genetic and physical location of the Escherichia coli rap locus, which is essential for growth of bacteriophage lambda.
G Guarneros, G Machado, P Guzmán, E Garay
J Bacteriol. 1987 Nov; 169(11): 5188–5192. doi: 10.1128/jb.169.11.5188-5192.1987
PMCID:
PMC213925
SummaryPage BrowsePDF–882K
19.
Origins of minigene-dependent growth inhibition in bacterial cells
Valérie Heurgué-Hamard, Vildan Dinçbas, Richard H. Buckingham, Måns Ehrenberg
EMBO J. 2000 Jun 1; 19(11): 2701–2709. doi: 10.1093/emboj/19.11.2701
PMCID:
PMC212743
AbstractArticlePDF–145K
20.
Sequestration of specific tRNA species cognate to the last sense codon of an overproduced gratuitous protein
Jeanne Menez, Valérie Heurgué-Hamard, Richard H. Buckingham
Nucleic Acids Res. 2000 Dec 1; 28(23): 4725–4732. doi: 10.1093/nar/28.23.4725
PMCID:
PMC115180
AbstractArticlePDF–354K

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