PMC Links for GEO Profiles (Select 39795143) - PMC

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Items: 15

Select item 100118221.

The β-latch structural element of the SufS cysteine desulfurase mediates active site accessibility and SufE transpersulfurase positioning

Rajleen K. Gogar, Franki Carroll, Juliana V. Conte, Mohamed Nasef, Jack A. Dunkle, Patrick A. Frantom

J Biol Chem. 2023 Mar; 299(3): 102966. Published online 2023 Feb 1. doi: 10.1016/j.jbc.2023.102966

PMCID:: PMC10011822

Abstract Article PDF–3.1M

Select item 66998472.

Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues

Matthew Blahut, Courtney E. Wise, Michael R. Bruno, Guangchao Dong, Thomas M. Makris, Patrick A. Frantom, Jack A. Dunkle, F. Wayne Outten

J Biol Chem. 2019 Aug 16; 294(33): 12444–12458. Published online 2019 Jun 27. doi: 10.1074/jbc.RA119.009471

PMCID:: PMC6699847

Abstract Article PDF–3.0M

Select item 66768933.

Structural evidence for dimer-interface driven regulation of the type II cysteine desulfurase, SufS.

Jack A. Dunkle, Michael Bruno, F. Wayne Outten, Patrick A. Frantom

Biochemistry. Author manuscript; available in PMC 2019 Aug 2.

Published in final edited form as: Biochemistry. 2019 Feb 12; 58(6): 687–696. Published online 2019 Jan 7. doi: 10.1021/acs.biochem.8b01122

PMCID:: PMC6676893

Abstract Article PDF–1.2M

Select item 46399304.

SufE D74R Substitution Alters Active Site Loop Dynamics To Further Enhance SufE Interaction with the SufS Cysteine Desulfurase

Yuyuan Dai, Dokyong Kim, Guangchao Dong, Laura S. Busenlehner, Patrick A. Frantom, F. Wayne Outten

Biochemistry. Author manuscript; available in PMC 2016 Aug 11.

Published in final edited form as: Biochemistry. 2015 Aug 11; 54(31): 4824–4833. Published online 2015 Jul 31. doi: 10.1021/acs.biochem.5b00663

PMCID:: PMC4639930

Abstract Article PDF–1.1M

Select item 41238555.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 35110506.

The E. coli SufS - SufE sulfur transfer system is more resistant to oxidative stress than IscS - IscU

Yuyuan Dai, F. Wayne Outten

FEBS Lett. Author manuscript; available in PMC 2013 Nov 16.

Published in final edited form as: FEBS Lett. 2012 Nov 16; 586(22): 4016–4022. Published online 2012 Oct 12. doi: 10.1016/j.febslet.2012.10.001

PMCID:: PMC3511050

Abstract Article PDF–769K

Select item 25932027.

Oxidant-Responsive Induction of the suf Operon, Encoding a Fe-S Assembly System, through Fur and IscR in Escherichia coli

Kyung-Chang Lee, Won-Sik Yeo, Jung-Hye Roe

J Bacteriol. 2008 Dec; 190(24): 8244–8247. Published online 2008 Oct 10. doi: 10.1128/JB.01161-08

PMCID:: PMC2593202

Abstract Article PDF–491K

Select item 16814818.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 13252009.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 21013110.

Suppression of a -1 frameshift mutation by a recessive tRNA suppressor which causes doublet decoding.

D J O'Mahony, D Hughes, S Thompson, J F Atkins

J Bacteriol. 1989 Jul; 171(7): 3824–3830. doi: 10.1128/jb.171.7.3824-3830.1989

PMCID:: PMC210131

Summary Page Browse PDF–1.4M

Select item 20613211.

Doublet translocation at GGA is mediated directly by mutant tRNA(2Gly).

F T Pagel, T M Tuohy, J F Atkins, E J Murgola

J Bacteriol. 1992 Jun; 174(12): 4179–4182. doi: 10.1128/jb.174.12.4179-4182.1992

PMCID:: PMC206132

Summary Page Browse PDF–718K

Select item 13546112.

Requirement for IscS in Biosynthesis of All Thionucleosides in Escherichia coli

Charles T. Lauhon

J Bacteriol. 2002 Dec; 184(24): 6820–6829. doi: 10.1128/JB.184.24.6820-6829.2002

PMCID:: PMC135461

Abstract Article PDF–385K

Select item 12446213.

The iscS gene is essential for the biosynthesis of 2-selenouridine in tRNA and the selenocysteine-containing formate dehydrogenase H

Hisaaki Mihara, Shin-ichiro Kato, Gerard M. Lacourciere, Thressa C. Stadtman, Robert A. J. D. Kennedy, Tatsuo Kurihara, Umechiyo Tokumoto, Yasuhiro Takahashi, Nobuyoshi Esaki

Proc Natl Acad Sci U S A. 2002 May 14; 99(10): 6679–6683. Published online 2002 May 7. doi: 10.1073/pnas.102176099