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Items: 1 to 20 of 23

1.
Analysis of the natively unstructured RNA/protein-recognition core in the Escherichia coli RNA degradosome and its interactions with regulatory RNA/Hfq complexes
Heather A Bruce, Dijun Du, Dijana Matak-Vinkovic, Katarzyna J Bandyra, R William Broadhurst, Esther Martin, Frank Sobott, Alexander V Shkumatov, Ben F Luisi
Nucleic Acids Res. 2018 Jan 9; 46(1): 387–402. Published online 2017 Nov 9. doi: 10.1093/nar/gkx1083
PMCID:
PMC5758883
AbstractArticlePDF–5.8M
2.
Characterization of the RNA Degradosome of Pseudoalteromonas haloplanktis: Conservation of the RNase E-RhlB Interaction in the Gammaproteobacteria
Soraya Aït-Bara, Agamemnon J. Carpousis
J Bacteriol. 2010 Oct; 192(20): 5413–5423. Published online 2010 Aug 20. doi: 10.1128/JB.00592-10
PMCID:
PMC2950506
AbstractArticlePDF–2.0M
3.
Molecular recognition between Escherichia coli enolase and ribonuclease E
Salima Nurmohamed, Adam R. McKay, Carol V. Robinson, Ben F. Luisi
Acta Crystallogr D Biol Crystallogr. 2010 Sep 1; 66(Pt 9): 1036–1040. Published online 2010 Aug 13. doi: 10.1107/S0907444910030015
PMCID:
PMC2935283
AbstractArticlePDF–764K
4.
Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins
Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J. Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili
PLoS Biol. 2009 Apr; 7(4): e1000096. Published online 2009 Apr 28. doi: 10.1371/journal.pbio.1000096
PMCID:
PMC2672614
AbstractArticle
5.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
6.
Time-dependent Translational Response of E. coli to Excess Zn(II)
J. Allen Easton, Peter Thompson, Michael W. Crowder
J Biomol Tech. 2006 Dec; 17(5): 303–307.
PMCID:
PMC2291802
AbstractArticlePDF–238K
7.
RNaseE and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton
Aziz Taghbalout, Lawrence Rothfield
Proc Natl Acad Sci U S A. 2007 Jan 30; 104(5): 1667–1672. Published online 2007 Jan 22. doi: 10.1073/pnas.0610491104
PMCID:
PMC1785250
AbstractArticlePDF–387K
8.
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori
Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050
PMCID:
PMC1681482
AbstractArticlePDF–400K
9.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
10.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
11.
RhlB helicase rather than enolase is the β-subunit of the Escherichia coli polynucleotide phosphorylase (PNPase)–exoribonucleolytic complex
Pei-Hsun Lin, Sue Lin-Chao
Proc Natl Acad Sci U S A. 2005 Nov 15; 102(46): 16590–16595. Published online 2005 Nov 7. doi: 10.1073/pnas.0500994102
PMCID:
PMC1277965
AbstractArticlePDF–474K
12.
Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli
Jaya K. Kumar, Stanley Tabor, Charles C. Richardson
Proc Natl Acad Sci U S A. 2004 Mar 16; 101(11): 3759–3764. Published online 2004 Mar 2. doi: 10.1073/pnas.0308701101
PMCID:
PMC374317
AbstractArticlePDF–397K
13.
Global analysis of Escherichia coli RNA degradosome function using DNA microarrays
Jonathan A. Bernstein, Pei-Hsun Lin, Stanley N. Cohen, Sue Lin-Chao
Proc Natl Acad Sci U S A. 2004 Mar 2; 101(9): 2758–2763. Published online 2004 Feb 23. doi: 10.1073/pnas.0308747101
PMCID:
PMC365694
AbstractArticlePDF–416K
14.
Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome
Nathalie F. Vanzo, Yeun Shan Li, Béatrice Py, Erwin Blum, Christopher F. Higgins, Lelia C. Raynal, Henry M. Krisch, Agamemnon J. Carpousis
Genes Dev. 1998 Sep 1; 12(17): 2770–2781. doi: 10.1101/gad.12.17.2770
PMCID:
PMC317140
AbstractArticlePDF–565K
15.
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase
Glen A. Coburn, Xin Miao, Douglas J. Briant, George A. Mackie
Genes Dev. 1999 Oct 1; 13(19): 2594–2603. doi: 10.1101/gad.13.19.2594
PMCID:
PMC317069
AbstractArticlePDF–600K
16.
RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli.
M Kido, K Yamanaka, T Mitani, H Niki, T Ogura, S Hiraga
J Bacteriol. 1996 Jul; 178(13): 3917–3925. doi: 10.1128/jb.178.13.3917-3925.1996
PMCID:
PMC232654
SummaryPDF–537K
17.
Properties of Escherichia coli Mutants Deficient in Enzymes of Glycolysis
Meher H. Irani, P. K. Maitra
J Bacteriol. 1977 Nov; 132(2): 398–410. doi: 10.1128/jb.132.2.398-410.1977
PMCID:
PMC221878
SummaryPage BrowsePDF–1.8M
18.
ColE1 hybrid plasmids for Escherichia coli genes of glycolysis and the hexose monophosphate shunt.
J Thomson, P D Gerstenberger, D E Goldberg, E Gociar, A Orozco de Silva, D G Fraenkel
J Bacteriol. 1979 Jan; 137(1): 502–506. doi: 10.1128/jb.137.1.502-506.1979
PMCID:
PMC218476
SummaryPage BrowsePDF–837K
19.
Escherichia coli mutant containing a large deletion from relA to argA.
A G Atherly
J Bacteriol. 1979 May; 138(2): 530–534. doi: 10.1128/jb.138.2.530-534.1979
PMCID:
PMC218209
SummaryPage BrowsePDF–826K
20.
Proteins associated with RNase E in a multicomponent ribonucleolytic complex.
A Miczak, V R Kaberdin, C L Wei, S Lin-Chao
Proc Natl Acad Sci U S A. 1996 Apr 30; 93(9): 3865–3869. doi: 10.1073/pnas.93.9.3865
PMCID:
PMC39450
SummaryPage BrowsePDF–1.0M

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