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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105166423.

ISW1a modulates cohesin distribution in centromeric and pericentromeric regions

Ireneusz Litwin, Małgorzata Nowicka, Katarzyna Markowska, Ewa Maciaszczyk-Dziubińska, Paulina Tomaszewska, Robert Wysocki, Karol Kramarz

Nucleic Acids Res. 2023 Sep 22; 51(17): 9101–9121. Published online 2023 Jul 24. doi: 10.1093/nar/gkad612

PMCID:: PMC10516642

Abstract Article PDF–2.8M

Select item 102977004.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 98363485.

A synthetic genetic array screen for interactions with the RNA helicase DED1 during cell stress in budding yeast

Sara B Carey, Hannah M List, Ashwin Siby, Paolo Guerra, Timothy A Bolger

G3 (Bethesda) 2023 Jan; 13(1): jkac296. Published online 2022 Nov 21. doi: 10.1093/g3journal/jkac296

PMCID:: PMC9836348

Abstract Article PDF–857K

Select item 92098116.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 89180427.

Stress response factors drive regrowth of quiescent cells

Zheng Kuang, Hongkai Ji, Jef D. Boeke

Curr Genet. Author manuscript; available in PMC 2022 Mar 13.

Published in final edited form as: Curr Genet. 2018 Aug; 64(4): 807–810. Published online 2018 Feb 17. doi: 10.1007/s00294-018-0813-0

PMCID:: PMC8918042

Abstract Article PDF–143K

Select item 85995478.

A quantitative yeast aging proteomics analysis reveals novel aging regulators

Yu Sun, Ruofan Yu, Hao-Bo Guo, Hong Qin, Weiwei Dang

GeroScience. 2021 Oct; 43(5): 2573–2593. Published online 2021 Jul 9. doi: 10.1007/s11357-021-00412-3

PMCID:: PMC8599547

Abstract Article PDF–1.1M

Select item 85942049.

HSF1 induces RNA polymerase II synthesis of ribosomal RNA in S. cerevisiae during nitrogen deprivation

Arjuna Rao Vallabhaneni, Merita Kabashi, Matt Haymowicz, Kushal Bhatt, Violet Wayman, Shazia Ahmed, Heather Conrad-Webb

Curr Genet. 2021; 67(6): 937–951. Published online 2021 Aug 6. doi: 10.1007/s00294-021-01197-w

PMCID:: PMC8594204

Abstract Article PDF–1.3M

Select item 848195010.

A Bacterial Quorum Sensing Molecule Elicits a General Stress Response in Saccharomyces cerevisiae

Antonia Delago, Rachel Gregor, Luba Dubinsky, Rambabu Dandela, Adi Hendler, Pnina Krief, Josep Rayo, Amir Aharoni, Michael M. Meijler

Front Microbiol. 2021; 12: 632658. Published online 2021 Sep 16. doi: 10.3389/fmicb.2021.632658

PMCID:: PMC8481950

Abstract Article PDF–756K

Select item 821475911.

Genome-wide imaging screen uncovers molecular determinants of arsenite-induced protein aggregation and toxicity

Stefanie Andersson, Antonia Romero, Joana Isabel Rodrigues, Sansan Hua, Xinxin Hao, Therese Jacobson, Vivien Karl, Nathalie Becker, Arghavan Ashouri, Sebastien Rauch, Thomas Nyström, Beidong Liu, Markus J. Tamás

J Cell Sci. 2021 Jun 1; 134(11): jcs258338. Published online 2021 Jun 4. doi: 10.1242/jcs.258338

PMCID:: PMC8214759

Abstract Article

Select item 818493712.

Msn2/4 transcription factors positively regulate expression of Atg39 ER-phagy receptor

Tomoaki Mizuno, Kenji Irie

Sci Rep. 2021; 11: 11919. Published online 2021 Jun 7. doi: 10.1038/s41598-021-91480-0

PMCID:: PMC8184937

Abstract Article PDF–2.5M

Select item 814983313.

Yeast cell fate control by temporal redundancy modulation of transcription factor paralogs

Yan Wu, Jiaqi Wu, Minghua Deng, Yihan Lin

Nat Commun. 2021; 12: 3145. Published online 2021 May 25. doi: 10.1038/s41467-021-23425-0

PMCID:: PMC8149833

Abstract Article PDF–1.7M

Select item 809411714.

SUMOylation stabilizes sister kinetochore biorientation to allow timely anaphase

Xue Bessie Su, Menglu Wang, Claudia Schaffner, Olga O. Nerusheva, Dean Clift, Christos Spanos, David A. Kelly, Michael Tatham, Andreas Wallek, Yehui Wu, Juri Rappsilber, A. Arockia Jeyaprakash, Zuzana Storchova, Ronald T. Hay, Adèle L. Marston

J Cell Biol. 2021 Jul 5; 220(7): e202005130. Published online 2021 Apr 30. doi: 10.1083/jcb.202005130

PMCID:: PMC8094117

Abstract Article PDF–8.1M

Select item 803524415.

The activity of yeast Apn2 AP endonuclease at uracil-derived AP sites is dependent on the major carbon source

Kasey Stokdyk, Alexandra Berroyer, Zacharia A. Grami, Nayun Kim

Curr Genet. Author manuscript; available in PMC 2021 Apr 10.

Published in final edited form as: Curr Genet. 2021 Apr; 67(2): 283–294. Published online 2021 Jan 1. doi: 10.1007/s00294-020-01141-4

PMCID:: PMC8035244

Abstract Article PDF–1.0M

Select item 791196616.

The Identification of Genetic Determinants of Methanol Tolerance in Yeast Suggests Differences in Methanol and Ethanol Toxicity Mechanisms and Candidates for Improved Methanol Tolerance Engineering

Marta N. Mota, Luís C. Martins, Isabel Sá-Correia

J Fungi (Basel) 2021 Feb; 7(2): 90. Published online 2021 Jan 27. doi: 10.3390/jof7020090

PMCID:: PMC7911966

Abstract Article PDF–5.7M

Select item 772838717.

Phenomic screen identifies a role for the yeast lysine acetyltransferase NuA4 in the control of Bcy1 subcellular localization, glycogen biosynthesis, and mitochondrial morphology

Elizabeth A. Walden, Roger Y. Fong, Trang T. Pham, Hana Knill, Sarah Jane Laframboise, Sylvain Huard, Mary-Ellen Harper, Kristin Baetz

PLoS Genet. 2020 Nov; 16(11): e1009220. Published online 2020 Nov 30. doi: 10.1371/journal.pgen.1009220

PMCID:: PMC7728387

Abstract Article PDF–4.0M

Select item 771875118.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 766773819.

Protein kinase A controls yeast growth in visible light

Mikael Molin, Katarina Logg, Kristofer Bodvard, Ken Peeters, Annabelle Forsmark, Friederike Roger, Anna Jörhov, Neha Mishra, Jean-Marc Billod, Sabiha Amir, Mikael Andersson, Leif A. Eriksson, Jonas Warringer, Mikael Käll, Anders Blomberg

BMC Biol. 2020; 18: 168. Published online 2020 Nov 16. doi: 10.1186/s12915-020-00867-4