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Items: 1 to 20 of 22

1.
Dimerization of a 5-kDa domain defines the architecture of the 5-MDa gammaproteobacterial pyruvate dehydrogenase complex
Sarah Meinhold, Rafal Zdanowicz, Christoph Giese, Rudi Glockshuber
Sci Adv. 2024 Feb 9; 10(6): eadj6358. Published online 2024 Feb 7. doi: 10.1126/sciadv.adj6358
PMCID:
PMC10849603
AbstractArticlePDF–6.6M
2.
Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification
Fan Liu, Philip Lössl, Richard Scheltema, Rosa Viner, Albert J. R. Heck
Nat Commun. 2017; 8: 15473. Published online 2017 May 19. doi: 10.1038/ncomms15473
PMCID:
PMC5454533
AbstractArticlePDF–1.5M
3.
Structure and Function of the Catalytic Domain of the Dihydrolipoyl Acetyltransferase Component in Escherichia coli Pyruvate Dehydrogenase Complex
Junjie Wang, Natalia S. Nemeria, Krishnamoorthy Chandrasekhar, Sowmini Kumaran, Palaniappa Arjunan, Shelley Reynolds, Guillermo Calero, Roman Brukh, Lazaros Kakalis, William Furey, Frank Jordan
J Biol Chem. 2014 May 30; 289(22): 15215–15230. Published online 2014 Apr 17. doi: 10.1074/jbc.M113.544080
PMCID:
PMC4140881
AbstractArticlePDF–2.2M
4.
YajL, Prokaryotic Homolog of Parkinsonism-associated Protein DJ-1, Functions as a Covalent Chaperone for Thiol Proteome
Hai-Tuong Le, Valérie Gautier, Fatoum Kthiri, Abderrahim Malki, Nadia Messaoudi, Mouadh Mihoub, Ahmed Landoulsi, Young Jun An, Sun-Shin Cha, Gilbert Richarme
J Biol Chem. 2012 Feb 17; 287(8): 5861–5870. Published online 2011 Dec 7. doi: 10.1074/jbc.M111.299198
PMCID:
PMC3285355
AbstractArticlePDF–1.2M
5.
Communication between Thiamin Cofactors in the Escherichia coli Pyruvate Dehydrogenase Complex E1 Component Active Centers: EVIDENCE FOR A “DIRECT PATHWAY” BETWEEN THE 4′-AMINOPYRIMIDINE N1′ ATOMS
Natalia S. Nemeria, Palaniappa Arjunan, Krishnamoorthy Chandrasekhar, Madouna Mossad, Kai Tittmann, William Furey, Frank Jordan
J Biol Chem. 2010 Apr 9; 285(15): 11197–11209. Published online 2010 Jan 27. doi: 10.1074/jbc.M109.069179
PMCID:
PMC2856997
AbstractArticlePDF–5.7M
6.
Conformational Ensemble Modulates Cooperativity in the Rate-determining Catalytic Step in the E1 Component of the Escherichia coli Pyruvate Dehydrogenase Multienzyme Complex
Sachin Kale, Frank Jordan
J Biol Chem. 2009 Nov 27; 284(48): 33122–33129. Published online 2009 Sep 29. doi: 10.1074/jbc.M109.065508
PMCID:
PMC2785154
AbstractArticlePDF–2.8M
7.
Efficient coupling of catalysis and dynamics in the E1 component of Escherichia coli pyruvate dehydrogenase multienzyme complex
Sachin Kale, Gözde Ulas, Jaeyoung Song, Gary W. Brudvig, William Furey, Frank Jordan
Proc Natl Acad Sci U S A. 2008 Jan 29; 105(4): 1158–1163. Published online 2008 Jan 23. doi: 10.1073/pnas.0709328105
PMCID:
PMC2234108
AbstractArticlePDF–1.4M
8.
Acetylphosphinate is the most potent mechanism-based substrate-like inhibitor of both the human and E. coli pyruvate dehydrogenase components of the pyruvate dehydrogenase complex
Natalia S. Nemeria, Lioubov G. Korotchkina, Sumit Chakraborty, Mulchand S. Patel, Frank Jordan
Bioorg Chem. Author manuscript; available in PMC 2007 Jan 29.
Published in final edited form as: Bioorg Chem. 2006 Dec; 34(6): 362–379. Published online 2006 Oct 27. doi: 10.1016/j.bioorg.2006.09.001
PMCID:
PMC1783836
AbstractArticlePDF–2.2M
9.
The 1′,4′-iminopyrimidine tautomer of thiamin diphosphate is poised for catalysis in asymmetric active centers on enzymes
Natalia Nemeria, Sumit Chakraborty, Ahmet Baykal, Lioubov G. Korotchkina, Mulchand S. Patel, Frank Jordan
Proc Natl Acad Sci U S A. 2007 Jan 2; 104(1): 78–82. Published online 2006 Dec 20. doi: 10.1073/pnas.0609973104
PMCID:
PMC1765481
AbstractArticlePDF–2.0M
10.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
11.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
12.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
13.
Intramolecular coupling of active sites in the pyruvate dehydrogenase multienzyme complex of Escherichia coli.
M J Danson, E A Hooper, R N Perham
Biochem J. 1978 Oct 1; 175(1): 193–198. doi: 10.1042/bj1750193
PMCID:
PMC1186054
SummaryPage BrowsePDF–988K
14.
Intramolecular coupling of active sites in the pyruvate dehydrogenase multienzyme complexes from bacterial and mammalian sources.
C J Stanley, L C Packman, M J Danson, C E Henderson, R N Perham
Biochem J. 1981 Jun 1; 195(3): 715–721. doi: 10.1042/bj1950715
PMCID:
PMC1162944
SummaryPage BrowsePDF–1.0M
15.
Subgenes expressing single lipoyl domains of the pyruvate dehydrogenase complex of Escherichia coli.
J S Miles, J R Guest
Biochem J. 1987 Aug 1; 245(3): 869–874. doi: 10.1042/bj2450869
PMCID:
PMC1148209
SummaryPage BrowsePDF–1.3M
16.
Overproduction of the pyruvate dehydrogenase multienzyme complex of Escherichia coli and site-directed substitutions in the E1p and E2p subunits.
G C Russell, R S Machado, J R Guest
Biochem J. 1992 Oct 15; 287(Pt 2): 611–619. doi: 10.1042/bj2870611
PMCID:
PMC1133209
SummaryPage BrowsePDF–2.0M
17.
Inhibition of pyruvate:ferredoxin oxidoreductase from Trichomonas vaginalis by pyruvate and its analogues. Comparison with the pyruvate decarboxylase component of the pyruvate dehydrogenase complex.
K P Williams, P F Leadlay, P N Lowe
Biochem J. 1990 May 15; 268(1): 69–75. doi: 10.1042/bj2680069
PMCID:
PMC1131392
SummaryPage BrowsePDF–1.3M
18.
Diversion of the Metabolic Flux from Pyruvate Dehydrogenase to Pyruvate Oxidase Decreases Oxidative Stress during Glucose Metabolism in Nongrowing Escherichia coli Cells Incubated under Aerobic, Phosphate Starvation Conditions
Patrice L. Moreau
J Bacteriol. 2004 Nov; 186(21): 7364–7368. doi: 10.1128/JB.186.21.7364-7368.2004
PMCID:
PMC523199
AbstractArticlePDF–100K
19.
Reconstitution of the Escherichia coli pyruvate dehydrogenase complex.
L J Reed, F H Pettit, M H Eley, L Hamilton, J H Collins, R M Oliver
Proc Natl Acad Sci U S A. 1975 Aug; 72(8): 3068–3072. doi: 10.1073/pnas.72.8.3068
PMCID:
PMC432921
SummaryPage BrowsePDF–1.2M
20.
Subunit stoichiometry and molecular weight of the pyruvate dehydrogenase multienzyme complex from Escherichia coli.
K J Angelides, S K Akiyama, G G Hammes
Proc Natl Acad Sci U S A. 1979 Jul; 76(7): 3279–3283. doi: 10.1073/pnas.76.7.3279
PMCID:
PMC383808
SummaryPage BrowsePDF–1.1M

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