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Items: 15

1.
Pyrimidine homeostasis is accomplished by directed overflow metabolism
Marshall Louis Reaves, Brian D. Young, Aaron M. Hosios, Yi-Fan Xu, Joshua D. Rabinowitz
Nature. Author manuscript; available in PMC 2015 Jun 17.
Published in final edited form as: Nature. 2013 Aug 8; 500(7461): 237–241. Published online 2013 Jul 31. doi: 10.1038/nature12445
PMCID:
PMC4470420
AbstractArticlePDF–430K
2.
Simplified proteomics approach to discover protein–ligand interactions
Youngil Chang, Jonathan P Schlebach, Ross A VerHeul, Chiwook Park
Protein Sci. 2012 Sep; 21(9): 1280–1287. Published online 2012 Jun 25. doi: 10.1002/pro.2112
PMCID:
PMC3631357
AbstractArticlePDF–290K
3.
Energetics-Based Protein Profiling on a Proteomic Scale: Identification of Proteins Resistant to Proteolysis
Chiwook Park, Sharleen Zhou, Jacqueline Gilmore, Susan Marqusee
J Mol Biol. Author manuscript; available in PMC 2010 Apr 21.
Published in final edited form as: J Mol Biol. 2007 May 18; 368(5): 1426–1437. Published online 2007 Mar 7. doi: 10.1016/j.jmb.2007.02.091
PMCID:
PMC2857998
AbstractArticlePDF–2.6M
4.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
5.
Proteome-Level Responses of Escherichia coli to Long-Chain Fatty Acids and Use of Fatty Acid Inducible Promoter in Protein Production
Mee-Jung Han, Jeong Wook Lee, Sang Yup Lee, Jong Shin Yoo
J Biomed Biotechnol. 2008; 2008: 735101. Published online 2007 Nov 21. doi: 10.1155/2008/735101
PMCID:
PMC2218904
AbstractArticlePDF–1.5M
6.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
7.
Large-scale identification of protein–protein interaction of Escherichia coli K-12
Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori
Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806
PMCID:
PMC1457052
AbstractArticlePDF–536K
8.
Escherichia coli K-12: a cooperatively developed annotation snapshot—2005
Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner
Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405
PMCID:
PMC1325200
AbstractArticlePDF–204K
9.
Proteomic analysis of thioredoxin-targeted proteins in Escherichia coli
Jaya K. Kumar, Stanley Tabor, Charles C. Richardson
Proc Natl Acad Sci U S A. 2004 Mar 16; 101(11): 3759–3764. Published online 2004 Mar 2. doi: 10.1073/pnas.0308701101
PMCID:
PMC374317
AbstractArticlePDF–397K
10.
Nucleotide sequence of the Escherichia coli uridine phosphorylase (udp) gene.
L Walton, C A Richards, L P Elwell
Nucleic Acids Res. 1989 Aug 25; 17(16): 6741. doi: 10.1093/nar/17.16.6741
PMCID:
PMC318381
SummaryPage BrowsePDF–111K
11.
Repression of Escherichia coli carbamoylphosphate synthase: relationships with enzyme synthesis in the arginine and pyrimidine pathways.
A Piérard, N Glansdorff, D Gigot, M Crabeel, P Halleux, L Thiry
J Bacteriol. 1976 Jul; 127(1): 291–301. doi: 10.1128/jb.127.1.291-301.1976
PMCID:
PMC233061
SummaryPage BrowsePDF–1.7M
12.
Tn10-mediated inversions fuse uridine phosphorylase (udp) and rRNA genes of Escherichia coli.
M Fonstein, T Nikolskaya, D Zaporojets, Y Nikolsky, S Kulakauskas, A Mironov
J Bacteriol. 1994 Apr; 176(8): 2265–2271. doi: 10.1128/jb.176.8.2265-2271.1994
PMCID:
PMC205348
SummaryPage BrowsePDF–1.6M
13.
Factors Influencing the Identification of Transcription Factor Binding Sites by Cross-Species Comparison
Lee Ann McCue, William Thompson, C. Steven Carmack, Charles E. Lawrence
Genome Res. 2002 Oct; 12(10): 1523–1532. doi: 10.1101/gr.323602
PMCID:
PMC187528
AbstractArticlePDF–192K
14.
Analysis of CRP-CytR interactions at the Escherichia coli udp promoter.
I Brikun, K Suziedelis, O Stemmann, R Zhong, L Alikhanian, E Linkova, A Mironov, D E Berg
J Bacteriol. 1996 Mar; 178(6): 1614–1622. doi: 10.1128/jb.178.6.1614-1622.1996
PMCID:
PMC177846
SummaryPDF–450K
15.
Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases.
W J Henzel, T M Billeci, J T Stults, S C Wong, C Grimley, C Watanabe
Proc Natl Acad Sci U S A. 1993 Jun 1; 90(11): 5011–5015. doi: 10.1073/pnas.90.11.5011
PMCID:
PMC46643
SummaryPage BrowsePDF–1.0M

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