PMC Links for GEO Profiles (Select 40295318) - PMC

Nannan Chen, Yunpeng Zhang, Mohamed Adel, Elena A. Kuklin, Martha L. Reed, Jacob D. Mardovin, Baskar Bakthavachalu, K. VijayRaghavan, Mani Ramaswami, Leslie C. Griffith

Curr Biol. Author manuscript; available in PMC 2023 Jun 20.

Published in final edited form as: Curr Biol. 2022 Jun 20; 32(12): 2730–2738.e5. Published online 2022 May 10. doi: 10.1016/j.cub.2022.04.047

PMCID:: PMC9233017

Abstract Article PDF–1.8M

Select item 86644864.

Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes

Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis

G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349

PMCID:: PMC8664486

Abstract Article PDF–3.1M

Select item 81049465.

Highly effective proximate labeling in Drosophila

Bo Zhang, Yuanbing Zhang, Ji-Long Liu

G3 (Bethesda) 2021 May; 11(5): jkab077. Published online 2021 Mar 16. doi: 10.1093/g3journal/jkab077

Correction in:: G3 (Bethesda). 2022 Mar; 12(3): jkac005.

PMCID:: PMC8104946

Abstract Article PDF–1.1M

Select item 73528416.

The Splicing Factor SF2 Is Critical for Hyperproliferation and Survival in a TORC1-Dependent Model of Early Tumorigenesis in Drosophila

Malgorzata Maria Parniewska, Hugo Stocker

Int J Mol Sci. 2020 Jun; 21(12): 4465. Published online 2020 Jun 24. doi: 10.3390/ijms21124465

PMCID:: PMC7352841

Abstract Article PDF–12M

Select item 73061797.

Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons

Anne L. Sapiro, Emily C. Freund, Lucas Restrepo, Huan-Huan Qiao, Amruta Bhate, Qin Li, Jian-Quan Ni, Timothy J. Mosca, Jin Billy Li

Cell Rep. Author manuscript; available in PMC 2020 Jun 21.

Published in final edited form as: Cell Rep. 2020 May 19; 31(7): 107654. doi: 10.1016/j.celrep.2020.107654

PMCID:: PMC7306179

Abstract Article PDF–2.1M

Select item 69615788.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 68004689.

Srrm234, but not canonical SR and hnRNP proteins, drive inclusion of Dscam exon 9 variable exons

Pinar Ustaoglu, Irmgard U. Haussmann, Hongzhi Liao, Antonio Torres-Mendez, Roland Arnold, Manuel Irimia, Matthias Soller

RNA. 2019 Oct; 25(10): 1353–1365. doi: 10.1261/rna.071316.119

PMCID:: PMC6800468

Abstract Article PDF–8.9M

Select item 673414510.

HITS-CLIP reveals sex-differential RNA binding and alterative splicing regulation of SRm160 in Drosophila

Chen Qiu, Yu Zhang, Yu-Jie Fan, Ting-Lin Pang, Yan Su, Shuai Zhan, Yong-Zhen Xu

J Mol Cell Biol. 2019 Feb; 11(2): 170–181. Published online 2018 May 10. doi: 10.1093/jmcb/mjy029

PMCID:: PMC6734145

Abstract Article PDF–1.4M

Select item 602596311.

Striking circadian neuron diversity and cycling of Drosophila alternative splicing

Qingqing Wang, Katharine C Abruzzi, Michael Rosbash, Donald C Rio

eLife. 2018; 7: e35618. Published online 2018 Jun 4. doi: 10.7554/eLife.35618

PMCID:: PMC6025963

Abstract Article PDF–3.0M

Select item 578989412.

The SR protein B52/SRp55 regulates splicing of the period thermosensitive intron and mid-day siesta in Drosophila

Zhichao Zhang, Weihuan Cao, Isaac Edery

Sci Rep. 2018; 8: 1872. Published online 2018 Jan 30. doi: 10.1038/s41598-017-18167-3

PMCID:: PMC5789894

Abstract Article PDF–1.6M

Select item 570780513.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900214.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 555760815.

Comprehensive analysis of nucleocytoplasmic dynamics of mRNA in Drosophila cells

Tao Chen, Bas van Steensel

PLoS Genet. 2017 Aug; 13(8): e1006929. Published online 2017 Aug 3. doi: 10.1371/journal.pgen.1006929

PMCID:: PMC5557608

Abstract Article PDF–4.7M

Select item 502578216.

Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster

Hirokazu Okada, H. Alexander Ebhardt, Sibylle Chantal Vonesch, Ruedi Aebersold, Ernst Hafen

Nat Commun. 2016; 7: 12649. Published online 2016 Sep 1. doi: 10.1038/ncomms12649

PMCID:: PMC5025782

Abstract Article PDF–2.2M

Select item 480554517.

A genome-wide resource for the analysis of protein localisation in Drosophila

Mihail Sarov, Christiane Barz, Helena Jambor, Marco Y Hein, Christopher Schmied, Dana Suchold, Bettina Stender, Stephan Janosch, Vinay Vikas KJ, RT Krishnan, Aishwarya Krishnamoorthy, Irene RS Ferreira, Radoslaw K Ejsmont, Katja Finkl, Susanne Hasse, Philipp Kämpfer, Nicole Plewka, Elisabeth Vinis, Siegfried Schloissnig, Elisabeth Knust, Volker Hartenstein, Matthias Mann, Mani Ramaswami, K VijayRaghavan, Pavel Tomancak, Frank Schnorrer

eLife. 2016; 5: e12068. Published online 2016 Feb 20. doi: 10.7554/eLife.12068

PMCID:: PMC4805545

Abstract Article PDF–9.1M

Select item 478811618.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 470597919.

The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub

Pak N. Kwong, Michael Chambers, Ajay A. Vashisht, Wiam Turki-Judeh, Tak Yu Yau, James A. Wohlschlegel, Albert J. Courey

J Biol Chem. 2015 Dec 11; 290(50): 30119–30130. Published online 2015 Oct 19. doi: 10.1074/jbc.M115.681171

Correction in:: J Biol Chem. 2016 Mar 25; 291(13): 6784.

PMCID:: PMC4705979

Abstract Article PDF–1.3M

Select item 461797220.

Regulation of alternative splicing in Drosophila by 56 RNA binding proteins

Angela N. Brooks, Michael O. Duff, Gemma May, Li Yang, Mohan Bolisetty, Jane Landolin, Ken Wan, Jeremy Sandler, Benjamin W. Booth, Susan E. Celniker, Brenton R. Graveley, Steven E. Brenner

Genome Res. 2015 Nov; 25(11): 1771–1780. doi: 10.1101/gr.192518.115

PMCID:: PMC4617972

Abstract Article PDF–1.9M

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