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Select item 99679061.

Noncoding RNA Regulation of Hormonal and Metabolic Systems in the Fruit Fly Drosophila

Ki-Kei Chan, Ting-Fung Chan, William Bendena, Jerome H. L. Hui

Metabolites. 2023 Feb; 13(2): 152. Published online 2023 Jan 19. doi: 10.3390/metabo13020152

PMCID:: PMC9967906

Abstract Article PDF–784K

Select item 91140552.

Genomic and functional conservation of lncRNAs: lessons from flies

Carlos Camilleri-Robles, Raziel Amador, Cecilia C. Klein, Roderic Guigó, Montserrat Corominas, Marina Ruiz-Romero

Mamm Genome. 2022; 33(2): 328–342. Published online 2022 Jan 31. doi: 10.1007/s00335-021-09939-4

PMCID:: PMC9114055

Abstract Article PDF–1.1M

Select item 86293913.

Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference

Javier J. Castro Alvarez, Maxime Revel, Judit Carrasco, Fabienne Cléard, Daniel Pauli, Valérie Hilgers, François Karch, Robert K. Maeda

PLoS Genet. 2021 Nov; 17(11): e1009843. Published online 2021 Nov 15. doi: 10.1371/journal.pgen.1009843

PMCID:: PMC8629391

Abstract Article PDF–2.2M

Select item 80539864.

Identification of a micropeptide and multiple secondary cell genes that modulate Drosophila male reproductive success

Clément Immarigeon, Yohan Frei, Sofie Y. N. Delbare, Dragan Gligorov, Pedro Machado Almeida, Jasmine Grey, Léa Fabbro, Emi Nagoshi, Jean-Christophe Billeter, Mariana F. Wolfner, François Karch, Robert K. Maeda

Proc Natl Acad Sci U S A. 2021 Apr 13; 118(15): e2001897118. Published online 2021 Apr 5. doi: 10.1073/pnas.2001897118

PMCID:: PMC8053986

Abstract Article PDF–1.9M

Select item 80422705.

Comprehensive Identification and Alternative Splicing of Microexons in Drosophila

Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu

Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602

PMCID:: PMC8042270

Abstract Article PDF–3.6M

Select item 73246446.

Integrating GWAS and Transcriptomics to Identify the Molecular Underpinnings of Thermal Stress Responses in Drosophila melanogaster

Melise C. Lecheta, David N. Awde, Thomas S. O’Leary, Laura N. Unfried, Nicholas A. Jacobs, Miles H. Whitlock, Eleanor McCabe, Beck Powers, Katie Bora, James S. Waters, Heather J. Axen, Seth Frietze, Brent L. Lockwood, Nicholas M. Teets, Sara H. Cahan

Front Genet. 2020; 11: 658. Published online 2020 Jun 23. doi: 10.3389/fgene.2020.00658

PMCID:: PMC7324644

Abstract Article PDF–1.8M

Select item 67700797.

Insights into the Functions of LncRNAs in Drosophila

Keqin Li, Yuanliangzi Tian, Ya Yuan, Xiaolan Fan, Mingyao Yang, Zhi He, Deying Yang

Int J Mol Sci. 2019 Sep; 20(18): 4646. Published online 2019 Sep 19. doi: 10.3390/ijms20184646

PMCID:: PMC6770079

Abstract Article PDF–1.7M

Select item 63388278.

Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy

Hamutal Arbel, Sumanta Basu, William W. Fisher, Ann S. Hammonds, Kenneth H. Wan, Soo Park, Richard Weiszmann, Benjamin W. Booth, Soile V. Keranen, Clara Henriquez, Omid Shams Solari, Peter J. Bickel, Mark D. Biggin, Susan E. Celniker, James B. Brown

Proc Natl Acad Sci U S A. 2019 Jan 15; 116(3): 900–908. Published online 2018 Dec 31. doi: 10.1073/pnas.1808833115

PMCID:: PMC6338827

Abstract Article PDF–1.5M

Select item 60677649.

The lncRNA male-specific abdominal plays a critical role in Drosophila accessory gland development and male fertility

Robert K. Maeda, Jessica L. Sitnik, Yohan Frei, Elodie Prince, Dragan Gligorov, Mariana F. Wolfner, François Karch

PLoS Genet. 2018 Jul; 14(7): e1007519. Published online 2018 Jul 16. doi: 10.1371/journal.pgen.1007519

PMCID:: PMC6067764

Abstract Article PDF–25M

Select item 590644910.

The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster

Lisa Jehrke, Fiona A. Stewart, Andrea Droste, Mathias Beller

Sci Rep. 2018; 8: 6215. Published online 2018 Apr 18. doi: 10.1038/s41598-018-24542-5

PMCID:: PMC5906449

Abstract Article PDF–4.5M

Select item 568900211.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 539305412.

Dual functionality of cis-regulatory elements as developmental enhancers and Polycomb response elements

Jelena Erceg, Tibor Pakozdi, Raquel Marco-Ferreres, Yad Ghavi-Helm, Charles Girardot, Adrian P. Bracken, Eileen E.M. Furlong

Genes Dev. 2017 Mar 15; 31(6): 590–602. doi: 10.1101/gad.292870.116

PMCID:: PMC5393054

Abstract Article PDF–1.6M

Select item 532507713.

Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster

Peter A. Combs, Michael B. Eisen

Version 1. F1000Res. 2017; 6: 41. Published online 2017 Jan 12. doi: 10.12688/f1000research.9720.1

PMCID:: PMC5325077

Abstract Article PDF–10M

Select item 505203814.

Critical roles of long noncoding RNAs in Drosophila spermatogenesis

Kejia Wen, Lijuan Yang, Tuanlin Xiong, Chao Di, Danhui Ma, Menghua Wu, Zhaoyu Xue, Xuedi Zhang, Li Long, Weimin Zhang, Jiaying Zhang, Xiaolin Bi, Junbiao Dai, Qiangfeng Zhang, Zhi John Lu, Guanjun Gao

Genome Res. 2016 Sep; 26(9): 1233–1244. doi: 10.1101/gr.199547.115

PMCID:: PMC5052038

Abstract Article PDF–1.7M

Select item 493787315.

The Genetic Basis for Variation in Sensitivity to Lead Toxicity in Drosophila melanogaster

Shanshan Zhou, Tatiana V. Morozova, Yasmeen N. Hussain, Sarah E. Luoma, Lenovia McCoy, Akihiko Yamamoto, Trudy F.C. Mackay, Robert R.H. Anholt

Environ Health Perspect. 2016 Jul; 124(7): 1062–1070. Published online 2016 Feb 9. doi: 10.1289/ehp.1510513

PMCID:: PMC4937873

Abstract Article PDF–1.3M

Select item 492804716.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 490212717.

microRNA-encoded behaviour in Drosophila

Joao Picao-Osorio, Jamie Johnston, Matthias Landgraf, Jimena Berni, Claudio R. Alonso

Science. Author manuscript; available in PMC 2016 Jun 10.

Published in final edited form as: Science. 2015 Nov 13; 350(6262): 815–820. Published online 2015 Oct 22. doi: 10.1126/science.aad0217

PMCID:: PMC4902127

Abstract Article PDF–1.7M

Select item 478205218.

Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs

Ronit Wilk, Jack Hu, Dmitry Blotsky, Henry M. Krause

Genes Dev. 2016 Mar 1; 30(5): 594–609. doi: 10.1101/gad.276931.115

PMCID:: PMC4782052

Abstract Article PDF–883K

Select item 467302719.

Hox miRNA regulation within the Drosophila Bithorax Complex: patterning behavior

Daniel L. Garaulet, Eric C. Lai

Mech Dev. Author manuscript; available in PMC 2016 Nov 1.

Published in final edited form as: Mech Dev. 2015 Nov; 138(0 2): 151–159. Published online 2015 Aug 23. doi: 10.1016/j.mod.2015.08.006

PMCID:: PMC4673027

Abstract Article PDF–528K

Select item 452832920.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929