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Items: 1 to 20 of 56

1.
RNAseq analysis of the drug jian-yan-ling (JYL) using both in vivo and in vitro models
Xiaobo Zhang, Yunliang Zhai, Dandan Zhang, Chang Che, Yayun Zhang, Quan Li, Xue Zhang, Lingrui Zhao
Heliyon. 2023 May; 9(5): e16143. Published online 2023 May 19. doi: 10.1016/j.heliyon.2023.e16143
PMCID:
PMC10213199
AbstractArticlePDF–5.2M
2.
Systematic analysis of YFP traps reveals common mRNA/protein discordance in neural tissues
Joshua S. Titlow, Maria Kiourlappou, Ana Palanca, Jeffrey Y. Lee, Dalia S. Gala, Darragh Ennis, Joyce J.S. Yu, Florence L. Young, David Miguel Susano Pinto, Sam Garforth, Helena S. Francis, Finn Strivens, Hugh Mulvey, Alex Dallman-Porter, Staci Thornton, Diana Arman, Marissa J. Millard, Aino I. Järvelin, Mary Kay Thompson, Martin Sargent, Ilias Kounatidis, Richard M. Parton, Stephen Taylor, Ilan Davis
J Cell Biol. 2023 Jun 5; 222(6): e202205129. Published online 2023 May 5. doi: 10.1083/jcb.202205129
PMCID:
PMC10165541
AbstractArticlePDF–8.4M
3.
Proximity labeling reveals a new in vivo network of interactors for the histone demethylase KDM5
Matanel Yheskel, Simone Sidoli, Julie Secombe
Epigenetics Chromatin. 2023; 16: 8. Published online 2023 Feb 18. doi: 10.1186/s13072-023-00481-y
PMCID:
PMC9938590
AbstractArticlePDF–4.8M
4.
Lint‐O cooperates with L(3)mbt in target gene suppression to maintain homeostasis in fly ovary and brain
Hitomi Yamamoto‐Matsuda, Keita Miyoshi, Mai Moritoh, Hikari Yoshitane, Yoshitaka Fukada, Kuniaki Saito, Soichiro Yamanaka, Mikiko C Siomi
EMBO Rep. 2022 Oct; 23(10): e53813. Published online 2022 Aug 22. doi: 10.15252/embr.202153813
PMCID:
PMC9535798
AbstractArticlePDF–1.4M
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
Piwi suppresses transcription of Brahma-dependent transposons via Maelstrom in ovarian somatic cells
Ryo Onishi, Kaoru Sato, Kensaku Murano, Lumi Negishi, Haruhiko Siomi, Mikiko C. Siomi
Sci Adv. 2020 Dec; 6(50): eaaz7420. Published online 2020 Dec 11. doi: 10.1126/sciadv.aaz7420
PMCID:
PMC7732180
AbstractArticlePDF–1.1M
7.
A long lost key opens an ancient lock: Drosophila Myb causes a synthetic multivulval phenotype in nematodes
Paul J. Vorster, Paul Goetsch, Tilini U. Wijeratne, Keelan Z. Guiley, Laura Andrejka, Sarvind Tripathi, Braden J. Larson, Seth M. Rubin, Susan Strome, Joseph S. Lipsick
Biol Open. 2020 May 15; 9(5): bio051508. Published online 2020 May 4. doi: 10.1242/bio.051508
PMCID:
PMC7225089
AbstractArticlePDF–3.9M
8.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
9.
Retrograde BMP signaling activates neuronal gene expression through widespread deployment of a conserved BMP-responsive cis-regulatory activation element
Robin Vuilleumier, Tianshun Lian, Stephane Flibotte, Zaynah N Khan, Alisa Fuchs, George Pyrowolakis, Douglas W Allan
Nucleic Acids Res. 2019 Jan 25; 47(2): 679–699. Published online 2018 Nov 22. doi: 10.1093/nar/gky1135
PMCID:
PMC6344883
AbstractArticlePDF–5.2M
10.
Genome-wide analysis of gene regulation mechanisms during Drosophila spermatogenesis
Petr P. Laktionov, Daniil A. Maksimov, Stanislav E. Romanov, Polina A. Antoshina, Olga V. Posukh, Helen White-Cooper, Dmitry E. Koryakov, Stepan N. Belyakin
Epigenetics Chromatin. 2018; 11: 14. Published online 2018 Apr 2. doi: 10.1186/s13072-018-0183-3
PMCID:
PMC5879934
AbstractArticlePDF–1.3M
11.
Comparative analysis of behavioral and transcriptional variation underlying CO2 sensory neuron function and development in Drosophila
Jia Wern Pan, Joi McLaughlin, Haining Yang, Charles Leo, Paula Rambarat, Sumie Okuwa, Anaïs Monroy-Eklund, Sabrina Clark, Corbin D. Jones, Pelin Cayirlioglu Volkan
Fly (Austin) 2017; 11(4): 239–252. Published online 2017 Jun 23. doi: 10.1080/19336934.2017.1344374
PMCID:
PMC5721949
AbstractArticlePDF–1.3M
12.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
13.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
14.
The Nucleosome Remodeling and Deacetylase Complex NuRD Is Built from Preformed Catalytically Active Sub-modules
W. Zhang, A. Aubert, J.M. Gomez de Segura, M. Karuppasamy, S. Basu, A.S. Murthy, A. Diamante, T.A. Drury, J. Balmer, J. Cramard, A.A. Watson, D. Lando, S.F. Lee, M. Palayret, S.L. Kloet, A.H. Smits, M.J. Deery, M. Vermeulen, B. Hendrich, D. Klenerman, C. Schaffitzel, I. Berger, E.D. Laue
J Mol Biol. 2016 Jul 17; 428(14): 2931–2942. doi: 10.1016/j.jmb.2016.04.025
PMCID:
PMC4942838
AbstractArticlePDF–1.1M
15.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
16.
A genetic interaction map of cell cycle regulators
Maximilian Billmann, Thomas Horn, Bernd Fischer, Thomas Sandmann, Wolfgang Huber, Michael Boutros
Mol Biol Cell. 2016 Apr 15; 27(8): 1397–1407. doi: 10.1091/mbc.E15-07-0467
PMCID:
PMC4831891
AbstractArticlePDF–4.0M
17.
Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing
Alborz Mazloomian, Irmtraud M Meyer
RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703
PMCID:
PMC4829317
AbstractArticlePDF–609K
18.
The pro-apoptotic activity of Drosophila Rbf1 involves dE2F2-dependent downregulation of diap1 and buffy mRNA
A Clavier, A Baillet, A Rincheval-Arnold, A Coléno-Costes, C Lasbleiz, B Mignotte, I Guénal
Cell Death Dis. 2014 Sep; 5(9): e1405. Published online 2014 Sep 4. doi: 10.1038/cddis.2014.372
PMCID:
PMC4540203
AbstractArticlePDF–2.1M
19.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
20.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M

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