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Items: 1 to 20 of 26

1.
Roles for RNA export factor, Nxt1, in ensuring muscle integrity and normal RNA expression in Drosophila
Kevin van der Graaf, Katia Jindrich, Robert Mitchell, Helen White-Cooper
G3 (Bethesda) 2021 Jan; 11(1): jkaa046. Published online 2020 Dec 24. doi: 10.1093/g3journal/jkaa046
PMCID:
PMC8022728
AbstractArticlePDF–3.3M
2.
The Broad Transcription Factor Links Hormonal Signaling, Gene Expression, and Cellular Morphogenesis Events During Drosophila Imaginal Disc Development
Clinton Rice, Stuart J. Macdonald, Xiaochen Wang, Robert E. Ward
Genetics. 2020 Dec; 216(4): 1137–1152. Published online 2020 Oct 28. doi: 10.1534/genetics.120.303717
PMCID:
PMC7768262
AbstractArticlePDF–1.5M
3.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
4.
A Direct Role for Cohesin in Gene Regulation and Ecdysone Response in Drosophila Salivary Glands
Andrea Pauli, Joke G. van Bemmel, Raquel A. Oliveira, Takehiko Itoh, Katsuhiko Shirahige, Bas van Steensel, Kim Nasmyth
Curr Biol. Author manuscript; available in PMC 2016 Feb 23.
Published in final edited form as: Curr Biol. 2010 Oct 26; 20(20): 1787–1798. Published online 2010 Oct 7. doi: 10.1016/j.cub.2010.09.006
PMCID:
PMC4763543
AbstractArticlePDF–1.9M
5.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
6.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
7.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
8.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
9.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
10.
The chromatin remodeling and mRNA splicing functions of the Brahma (SWI/SNF) complex are mediated by the SNR1/SNF5 regulatory subunit
Claudia B. Zraly, Andrew K. Dingwall
Nucleic Acids Res. 2012 Jul; 40(13): 5975–5987. Published online 2012 Mar 28. doi: 10.1093/nar/gks288
PMCID:
PMC3401471
AbstractArticlePDF–4.5M
11.
A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene
G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger
Cell. Author manuscript; available in PMC 2011 Nov 12.
Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047
PMCID:
PMC3040441
AbstractArticlePDF–2.0M
12.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
13.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M
14.
The loss of histone H3 lysine 9 acetylation due to dSAGA-specific dAda2b mutation influences the expression of only a small subset of genes
Nóra Zsindely, Tibor Pankotai, Zsuzsanna Újfaludi, Dániel Lakatos, Orbán Komonyi, László Bodai, László Tora, Imre M. Boros
Nucleic Acids Res. 2009 Nov; 37(20): 6665–6680. Published online 2009 Sep 8. doi: 10.1093/nar/gkp722
PMCID:
PMC2777428
AbstractArticlePDF–6.2M
15.
Two Subunits Specific to the PBAP Chromatin Remodeling Complex Have Distinct and Redundant Functions during Drosophila Development
Inés Carrera, Jiri Zavadil, Jessica E. Treisman
Mol Cell Biol. 2008 Sep; 28(17): 5238–5250. Published online 2008 Jun 23. doi: 10.1128/MCB.00747-08
PMCID:
PMC2519717
AbstractArticlePDF–875K
16.
The genomic response to 20-hydroxyecdysone at the onset of Drosophila metamorphosis
Robert B Beckstead, Geanette Lam, Carl S Thummel
Genome Biol. 2005; 6(12): R99. Published online 2005 Nov 21. doi: 10.1186/gb-2005-6-12-r99
PMCID:
PMC1414087
AbstractArticlePDF–1.5M
17.
The Drosophila nucleosome remodeling factor NURF is required for Ecdysteroid signaling and metamorphosis
Paul Badenhorst, Hua Xiao, Lucy Cherbas, So Yeon Kwon, Matt Voas, Ilaria Rebay, Peter Cherbas, Carl Wu
Genes Dev. 2005 Nov 1; 19(21): 2540–2545. doi: 10.1101/gad.1342605
PMCID:
PMC1276728
AbstractArticlePDF–335K
18.
The Ecdysone-Inducible Broad-Complex and E74 Early Genes Interact to Regulate Target Gene Transcription and Drosophila Metamorphosis
J. C. Fletcher, C. S. Thummel
Genetics. 1995 Nov; 141(3): 1025–1035. doi: 10.1093/genetics/141.3.1025
PMCID:
PMC1206826
SummaryPDF–7.0M
19.
The Ecdysone-Induced Puffing Cascade in Drosophila Salivary Glands: A Broad-Complex Early Gene Regulates Intermolt and Late Gene Transcription
P. S. Guay, G. M. Guild
Genetics. 1991 Sep; 129(1): 169–175. doi: 10.1093/genetics/129.1.169
PMCID:
PMC1204563
SummaryPDF–3.5M
20.
Combined Evidence Annotation of Transposable Elements in Genome Sequences
Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere
PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022
PMCID:
PMC1185648
AbstractArticlePDF–273K

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