PMC Links for GEO Profiles (Select 40765302) - PMC

Select item 107611211.

CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing

Doreen I. Lugano, Lindsey N. Barrett, Dale Chaput, Margaret A. Park, Sandy D. Westerheide

RNA Biol. 2024; 21(1): 1–11. Published online 2023 Dec 21. doi: 10.1080/15476286.2023.2289707

PMCID:: PMC10761121

Select item 94378482.

Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans

Murat Artan, Markus Hartl, Weiqiang Chen, Mario de Bono

J Biol Chem. 2022 Sep; 298(9): 102343. Published online 2022 Aug 3. doi: 10.1016/j.jbc.2022.102343

PMCID:: PMC9437848

Abstract Article PDF–2.0M

Select item 84467933.

Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling

Murat Artan, Stephen Barratt, Sean M. Flynn, Farida Begum, Mark Skehel, Armel Nicolas, Mario de Bono

J Biol Chem. 2021 Sep; 297(3): 101094. Published online 2021 Aug 18. doi: 10.1016/j.jbc.2021.101094

Correction in:: J Biol Chem. 2022 Jun; 298(6): 102081.

PMCID:: PMC8446793

Abstract Article PDF–1.6M

Select item 83311834.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 62165906.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 49426127.

The RNA-binding protein repertoire of Arabidopsis thaliana

Claudius Marondedze, Ludivine Thomas, Natalia L. Serrano, Kathryn S. Lilley, Chris Gehring

Sci Rep. 2016; 6: 29766. Published online 2016 Jul 11. doi: 10.1038/srep29766

PMCID:: PMC4942612

Abstract Article PDF–1.2M

Select item 36554728.

The nascent polypeptide-associated complex is a key regulator of proteostasis

Janine Kirstein-Miles, Annika Scior, Elke Deuerling, Richard I Morimoto

EMBO J. 2013 May 15; 32(10): 1451–1468. Published online 2013 Apr 19. doi: 10.1038/emboj.2013.87

PMCID:: PMC3655472

Abstract Article PDF–1.7M

Select item 31020779.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 295487010.

A proteomic view of Caenorhabditis elegans caused by short-term hypoxic stress

Hualing Li, Changhong Ren, Jinping Shi, Xingyi Hang, Feilong Zhang, Yan Gao, Yonghong Wu, Langlai Xu, Changsheng Chen, Chenggang Zhang

Proteome Sci. 2010; 8: 49. Published online 2010 Sep 21. doi: 10.1186/1477-5956-8-49

PMCID:: PMC2954870

Abstract Article PDF–921K

Select item 278742811.

A Genomewide RNAi Screen for Genes That Affect the Stability, Distribution and Function of P Granules in Caenorhabditis elegans

Dustin L. Updike, Susan Strome

Genetics. 2009 Dec; 183(4): 1397–1419. doi: 10.1534/genetics.109.110171

PMCID:: PMC2787428

Abstract Article PDF–6.6M

Select item 273434012.

Nucleolar Proteins Suppress Caenorhabditis elegans Innate Immunity by Inhibiting p53/CEP-1

Laura E. Fuhrman, Ajay Kumar Goel, Jason Smith, Kevin V. Shianna, Alejandro Aballay

PLoS Genet. 2009 Sep; 5(9): e1000657. Published online 2009 Sep 18. doi: 10.1371/journal.pgen.1000657

PMCID:: PMC2734340

Abstract Article PDF–1.1M

Select item 266074913.

Multiple ERK substrates execute single biological processes in Caenorhabditis elegans germ-line development

Swathi Arur, Mitsue Ohmachi, Sudhir Nayak, Matthew Hayes, Alejandro Miranda, Amanda Hay, Andy Golden, Tim Schedl

Proc Natl Acad Sci U S A. 2009 Mar 24; 106(12): 4776–4781. Published online 2009 Mar 5. doi: 10.1073/pnas.0812285106

PMCID:: PMC2660749

Abstract Article PDF–1.1M

Select item 184769614.

Lifespan Regulation by Evolutionarily Conserved Genes Essential for Viability

Sean P Curran, Gary Ruvkun

PLoS Genet. 2007 Apr; 3(4): e56. Prepublished online 2007 Feb 27. Published online 2007 Apr 6. doi: 10.1371/journal.pgen.0030056

PMCID:: PMC1847696

Abstract Article PDF–447K

Select item 169894915.

A Map of the Interactome Network of the Metazoan C. elegans

Siming Li, Christopher M. Armstrong, Nicolas Bertin, Hui Ge, Stuart Milstein, Mike Boxem, Pierre-Olivier Vidalain, Jing-Dong J. Han, Alban Chesneau, Tong Hao, Debra S. Goldberg, Ning Li, Monica Martinez, Jean-François Rual, Philippe Lamesch, Lai Xu, Muneesh Tewari, Sharyl L. Wong, Lan V. Zhang, Gabriel F. Berriz, Laurent Jacotot, Philippe Vaglio, Jérôme Reboul, Tomoko Hirozane-Kishikawa, Qianru Li, Harrison W. Gabel, Ahmed Elewa, Bridget Baumgartner, Debra J. Rose, Haiyuan Yu, Stephanie Bosak, Reynaldo Sequerra, Andrew Fraser, Susan E. Mango, William M. Saxton, Susan Strome, Sander van den Heuvel, Fabio Piano, Jean Vandenhaute, Claude Sardet, Mark Gerstein, Lynn Doucette-Stamm, Kristin C. Gunsalus, J. Wade Harper, Michael E. Cusick, Frederick P. Roth, David E. Hill, Marc Vidal

Science. Author manuscript; available in PMC 2006 Dec 14.

Published in final edited form as: Science. 2004 Jan 23; 303(5657): 540–543. Published online 2004 Jan 2. doi: 10.1126/science.1091403

PMCID:: PMC1698949

Abstract Article PDF–1.4M

Select item 108828916.

Analysis of long-lived C. elegans daf-2 mutants using serial analysis of gene expression

Julius Halaschek-Wiener, Jaswinder S. Khattra, Sheldon McKay, Anatoli Pouzyrev, Jeff M. Stott, George S. Yang, Robert A. Holt, Steven J.M. Jones, Marco A. Marra, Angela R. Brooks-Wilson, Donald L. Riddle

Genome Res. 2005 May; 15(5): 603–615. doi: 10.1101/gr.3274805

PMCID:: PMC1088289

Abstract Article PDF–632K

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