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Select item 115737891.

Accurate and sensitive interactome profiling using a quantitative protein-fragment complementation assay

Natalia Lazarewicz, Gaëlle Le Dez, Romina Cerjani, Lunelys Runeshaw, Matthias Meurer, Michael Knop, Robert Wysocki, Gwenaël Rabut

Cell Rep Methods. 2024 Oct 21; 4(10): 100880. Published online 2024 Oct 21. doi: 10.1016/j.crmeth.2024.100880

PMCID:: PMC11573789

Abstract Article PDF–4.0M

Select item 114236782.

An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae

Yasmina Filali-Mouncef, Alexandre Leytens, Prado Vargas Duarte, Mattia Zampieri, Jörn Dengjel, Fulvio Reggiori

Autophagy. 2024; 20(10): 2323–2337. Published online 2024 Jul 3. doi: 10.1080/15548627.2024.2366749

PMCID:: PMC11423678

Abstract Article PDF–1.7M

Select item 107988583.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107001384.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106812595.

eIF2A represses cell wall biogenesis gene expression in Saccharomyces cerevisiae

Laura Meyer, Baptiste Courtin, Maïté Gomard, Abdelkader Namane, Emmanuelle Permal, Gwenael Badis, Alain Jacquier, Micheline Fromont-Racine

PLoS One. 2023; 18(11): e0293228. Published online 2023 Nov 27. doi: 10.1371/journal.pone.0293228

PMCID:: PMC10681259

Abstract Article PDF–2.5M

Select item 102977006.

The Hsp90 molecular chaperone governs client proteins by targeting intrinsically disordered regions

Janhavi A. Kolhe, Neethu L. Babu, Brian C. Freeman

Mol Cell. Author manuscript; available in PMC 2024 Jun 15.

Published in final edited form as: Mol Cell. 2023 Jun 15; 83(12): 2035–2044.e7. Published online 2023 Jun 8. doi: 10.1016/j.molcel.2023.05.021

PMCID:: PMC10297700

Abstract Article PDF–2.0M

Select item 92860237.

Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

Mark Mattingly, Chris Seidel, Sofía Muñoz, Yan Hao, Ying Zhang, Zhihui Wen, Laurence Florens, Frank Uhlmann, Jennifer L. Gerton

Curr Biol. 2022 Jul 11; 32(13): 2884–2896.e6. doi: 10.1016/j.cub.2022.05.019

PMCID:: PMC9286023

Abstract Article

Select item 92400208.

Lsm7 phase-separated condensates trigger stress granule formation

Michelle Lindström, Lihua Chen, Shan Jiang, Dan Zhang, Yuan Gao, Ju Zheng, Xinxin Hao, Xiaoxue Yang, Arpitha Kabbinale, Johannes Thoma, Lisa C. Metzger, Deyuan Y. Zhang, Xuefeng Zhu, Huisheng Liu, Claes M. Gustafsson, Björn M. Burmann, Joris Winderickx, Per Sunnerhagen, Beidong Liu

Nat Commun. 2022; 13: 3701. Published online 2022 Jun 28. doi: 10.1038/s41467-022-31282-8

PMCID:: PMC9240020

Abstract Article PDF–8.1M

Select item 92098119.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 917028910.

Dcp2 C-terminal cis-binding elements control selective targeting of the decapping enzyme by forming distinct decapping complexes

Feng He, Chan Wu, Allan Jacobson

eLife. 2022; 11: e74410. Published online 2022 May 23. doi: 10.7554/eLife.74410

PMCID:: PMC9170289

Abstract Article PDF–4.7M

Select item 855165411.

Replication stress inhibits synthesis of histone mRNAs in yeast by removing Spt10p and Spt21p from the histone promoters

Madhura Bhagwat, Shreya Nagar, Pritpal Kaur, Riddhi Mehta, Ivana Vancurova, Ales Vancura

J Biol Chem. 2021 Nov; 297(5): 101246. Published online 2021 Sep 25. doi: 10.1016/j.jbc.2021.101246

PMCID:: PMC8551654

Abstract Article PDF–3.5M

Select item 848994612.

Nuclear SR-protein mediated mRNA quality control is continued in cytoplasmic nonsense-mediated decay

Sebastian Grosse, Yen-Yun Lu, Ivo Coban, Bettina Neumann, Heike Krebber

RNA Biol. 2021; 18(10): 1390–1407. Published online 2021 Jan 7. doi: 10.1080/15476286.2020.1851506

PMCID:: PMC8489946

Abstract Article PDF–11M

Select item 811832013.

Pbp1, the yeast ortholog of human Ataxin-2, functions in the cell growth on non-fermentable carbon sources

Dang Thi Tuong Vi, Shiori Fujii, Arvin Lapiz Valderrama, Ayaka Ito, Eri Matsuura, Ayaka Nishihata, Kaoru Irie, Yasuyuki Suda, Tomoaki Mizuno, Kenji Irie

PLoS One. 2021; 16(5): e0251456. Published online 2021 May 13. doi: 10.1371/journal.pone.0251456

PMCID:: PMC8118320

Abstract Article PDF–3.0M

Select item 787948214.

Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes

Yeonji Chang, Gyubum Lim, Won-Ki Huh

J Cell Biol. 2021 Apr 5; 220(4): e201912060. Published online 2021 Feb 10. doi: 10.1083/jcb.201912060

PMCID:: PMC7879482

Abstract Article PDF–5.9M

Select item 776825015.

Suppressors of mRNA Decapping Defects Restore Growth Without Major Effects on mRNA Decay Rates or Abundance

Minseon Kim, Ambro van Hoof

Genetics. 2020 Dec; 216(4): 1051–1069. Published online 2020 Sep 30. doi: 10.1534/genetics.120.303641

PMCID:: PMC7768250

Abstract Article PDF–2.2M

Select item 750740216.

Systematic analysis of bypass suppression of essential genes

Jolanda van Leeuwen, Carles Pons, Guihong Tan, Zi Yang Wang, Jing Hou, Jochen Weile, Marinella Gebbia, Wendy Liang, Ermira Shuteriqi, Zhijian Li, Maykel Lopes, Matej Ušaj, Andreia Dos Santos Lopes, Natascha van Lieshout, Chad L Myers, Frederick P Roth, Patrick Aloy, Brenda J Andrews, Charles Boone

Mol Syst Biol. 2020 Sep; 16(9): e9828. Published online 2020 Sep 17. doi: 10.15252/msb.20209828

PMCID:: PMC7507402

Abstract Article PDF–1.9M

Select item 737343017.

A quantitative inventory of yeast P body proteins reveals principles of composition and specificity

Wenmin Xing, Denise Muhlrad, Roy Parker, Michael K Rosen

eLife. 2020; 9: e56525. Published online 2020 Jun 19. doi: 10.7554/eLife.56525

PMCID:: PMC7373430

Abstract Article PDF–3.4M

Select item 729302618.

Pby1 is a direct partner of the Dcp2 decapping enzyme

Clément Charenton, Claudine Gaudon-Plesse, Régis Back, Nathalie Ulryck, Loreline Cosson, Bertrand Séraphin, Marc Graille

Nucleic Acids Res. 2020 Jun 19; 48(11): 6353–6366. Published online 2020 May 12. doi: 10.1093/nar/gkaa337

PMCID:: PMC7293026

Abstract Article PDF–4.4M

Select item 691638619.

Arginine methylation augments Sbp1 function in translation repression and decapping

Nupur Bhatter, Raju Roy, Shanaya Shah, Sneha P. Sastry, Sabnam Parbin, Rajan Iyappan, Siddharth Kankaria, Purusharth I. Rajyaguru

FEBS J. 2019 Dec; 286(23): 4693–4708. Published online 2019 Sep 23. doi: 10.1111/febs.15057

PMCID:: PMC6916386

Abstract Article PDF–2.7M

Select item 664889520.

Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME

Ingrid Rössler, Julia Embacher, Benjamin Pillet, Guillaume Murat, Laura Liesinger, Jutta Hafner, Julia Judith Unterluggauer, Ruth Birner-Gruenberger, Dieter Kressler, Brigitte Pertschy

Nucleic Acids Res. 2019 Jul 26; 47(13): 6984–7002. Published online 2019 May 7. doi: 10.1093/nar/gkz317