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Items: 1 to 20 of 35

1.
Posttranscriptional Regulation of tnaA by Protein-RNA Interaction Mediated by Ribosomal Protein L4 in Escherichia coli
Dharam Singh, Oleg N. Murashko, Sue Lin-Chao
J Bacteriol. 2020 May; 202(10): e00799-19. Prepublished online 2020 Mar 2. Published online 2020 Apr 27. doi: 10.1128/JB.00799-19
PMCID:
PMC7186457
AbstractArticlePDF–3.9M
2.
Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification
Fan Liu, Philip Lössl, Richard Scheltema, Rosa Viner, Albert J. R. Heck
Nat Commun. 2017; 8: 15473. Published online 2017 May 19. doi: 10.1038/ncomms15473
PMCID:
PMC5454533
AbstractArticlePDF–1.5M
3.
The extended loops of ribosomal proteins uL4 and uL22 of Escherichia coli contribute to ribosome assembly and protein translation
Marlon G. Lawrence, Md Shamsuzzaman, Maithri Kondopaka, Clarence Pascual, Janice M. Zengel, Lasse Lindahl
Nucleic Acids Res. 2016 Jul 8; 44(12): 5798–5810. Published online 2016 Jun 1. doi: 10.1093/nar/gkw493
PMCID:
PMC4937340
AbstractArticlePDF–4.5M
4.
RNA-structural Mimicry in Escherichia coli Ribosomal Protein L4-dependent Regulation of the S10 Operon
Ulrich Stelzl, Janice M. Zengel, Marina Tovbina, Marquis Walker, Knud H. Nierhaus, Lasse Lindahl, Dinshaw J. Patel
J Biol Chem. Author manuscript; available in PMC 2015 Dec 28.
Published in final edited form as: J Biol Chem. 2003 Jul 25; 278(30): 28237–28245. Published online 2003 May 8. doi: 10.1074/jbc.M302651200
PMCID:
PMC4692380
AbstractArticlePDF–1.0M
5.
Structures of the ribosome in intermediate states of ratcheting
Wen Zhang, Jack Dunkle, Jamie H. D. Cate
Science. Author manuscript; available in PMC 2010 Aug 10.
Published in final edited form as: Science. 2009 Aug 21; 325(5943): 1014–1017. doi: 10.1126/science.1175275
PMCID:
PMC2919209
AbstractArticlePDF–2.2M
6.
Regulation of the protein-conducting channel by a bound ribosome
James Gumbart, Leonardo G. Trabuco, Eduard Schreiner, Elizabeth Villa, Klaus Schulten
Structure. Author manuscript; available in PMC 2010 Nov 11.
Published in final edited form as: Structure. 2009 Nov 11; 17(11): 1453–1464. doi: 10.1016/j.str.2009.09.010
PMCID:
PMC2778611
AbstractArticlePDF–3.1M
7.
The Role of Disordered Ribosomal Protein Extensions in the Early Steps of Eubacterial 50 S Ribosomal Subunit Assembly
Youri Timsit, Zahir Acosta, Frédéric Allemand, Claude Chiaruttini, Mathias Springer
Int J Mol Sci. 2009 Mar; 10(3): 817–834. Published online 2009 Mar 2. doi: 10.3390/ijms10030817
PMCID:
PMC2672003
AbstractArticlePDF–6.1M
8.
Erythromycin resistance by L4/L22 mutations and resistance masking by drug efflux pump deficiency
Martin Lovmar, Karin Nilsson, Eliisa Lukk, Vladimir Vimberg, Tanel Tenson, Måns Ehrenberg
EMBO J. 2009 Mar 18; 28(6): 736–744. Published online 2009 Feb 5. doi: 10.1038/emboj.2009.17
PMCID:
PMC2666033
AbstractArticlePDF–395K
9.
Recombineering reveals a diverse collection of ribosomal proteins L4 and L22 that confer resistance to macrolide antibiotics
Elie J. Diner, Christopher S. Hayes
J Mol Biol. Author manuscript; available in PMC 2010 Feb 20.
Published in final edited form as: J Mol Biol. 2009 Feb 20; 386(2): 300–315. Published online 2009 Jan 3. doi: 10.1016/j.jmb.2008.12.064
PMCID:
PMC2644216
AbstractArticlePDF–1.5M
10.
Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli
Dharam Singh, Ssu-Jean Chang, Pei-Hsun Lin, Olga V. Averina, Vladimir R. Kaberdin, Sue Lin-Chao
Proc Natl Acad Sci U S A. 2009 Jan 20; 106(3): 864–869. Published online 2009 Jan 14. doi: 10.1073/pnas.0810205106
PMCID:
PMC2626609
AbstractArticlePDF–1014K
11.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
12.
Novel mutations in ribosomal proteins L4 and L22 that confer erythromycin resistance in Escherichia coli
Sephorah Zaman, Megan Fitzpatrick, Lasse Lindahl, Janice Zengel
Mol Microbiol. 2007 Nov; 66(4): 1039–1050. Published online 2007 Oct 23. doi: 10.1111/j.1365-2958.2007.05975.x
PMCID:
PMC2229831
AbstractArticlePDF–1.4M
13.
Early encounters of a nascent membrane protein: specificity and timing of contacts inside and outside the ribosome
Edith N.G. Houben, Raz Zarivach, Bauke Oudega, Joen Luirink
J Cell Biol. 2005 Jul 4; 170(1): 27–35. doi: 10.1083/jcb.200503035
PMCID:
PMC2171371
AbstractArticlePDF–3.2M
14.
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori
Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050
PMCID:
PMC1681482
AbstractArticlePDF–400K
15.
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi
Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049
PMCID:
PMC1681481
AbstractArticlePDF–141K
16.
RNA chaperone activity of large ribosomal subunit proteins from Escherichia coli
KATHARINA SEMRAD, RACHEL GREEN, RENÉE SCHROEDER
RNA. 2004 Dec; 10(12): 1855–1860. doi: 10.1261/rna.7121704
PMCID:
PMC1370674
AbstractArticlePDF–211K
17.
The extended loops of ribosomal proteins L4 and L22 are not required for ribosome assembly or L4-mediated autogenous control
JANICE M. ZENGEL, ADAM JERAULD, ANDRE WALKER, MARKUS C. WAHL, LASSE LINDAHL
RNA. 2003 Oct; 9(10): 1188–1197. doi: 10.1261/rna.5400703
PMCID:
PMC1370483
AbstractArticlePDF–445K
18.
Surprising flexibility of leader RNA determinants for r-protein L4-mediated transcription termination in the Escherichia coil S10 operon.
Janice M Zengel, Yizhong Sha, Lasse Lindahl
RNA. 2002 May; 8(5): 572–578. doi: 10.1017/s1355838202026237
PMCID:
PMC1370278
SummaryPDF–2.6M
19.
A short fragment of 23S rRNA containing the binding sites for two ribosomal proteins, L24 and L4, is a key element for rRNA folding during early assembly.
U Stelzl, K H Nierhaus
RNA. 2001 Apr; 7(4): 598–609. doi: 10.1017/s1355838201002059
PMCID:
PMC1370113
SummaryPDF–3.0M
20.
Ribosomal protein L4 from Escherichia coli utilizes nonidentical determinants for its structural and regulatory functions.
X Li, L Lindahl, J M Zengel
RNA. 1996 Jan; 2(1): 24–37.
PMCID:
PMC1369348
SummaryPDF–16M

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