PMC Links for GEO Profiles (Select 43123542) - PMC

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Items: 20

Select item 42507771.

Solubility of disulfide-bonded proteins in the cytoplasm of Escherichia coli and its “oxidizing” mutant

Sheng Xiong, Yi-Fei Wang, Xiang-Rong Ren, Bing Li, Mei-Ying Zhang, Yong Luo, Ling Zhang, Qiu-Ling Xie, Kuan-Yuan Su

World J Gastroenterol. 2005 Feb 21; 11(7): 1077–1082. Published online 2005 Feb 21. doi: 10.3748/wjg.v11.i7.1077

PMCID:: PMC4250777

Abstract Article PDF–438K

Select item 41238552.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 23742293.

Exploring the conformational equilibrium of E. coli thioredoxin reductase: Characterization of two catalytically important states by ultrafast flavin fluorescence spectroscopy

Petra A.W. Van Den Berg, Scott B. Mulrooney, Bas Gobets, Ivo H.M. Van Stokkum, Arie Van Hoek, Charles H. Williams, JR., Antonie J.W.G. Visser

Protein Sci. 2001 Oct; 10(10): 2037–2049. doi: 10.1110/ps.06701

PMCID:: PMC2374229

Abstract Article PDF–219K

Select item 23733324.

Functional plasticity of a peroxidase allows evolution of diverse disulfide-reducing pathways

Melinda J. Faulkner, Karthik Veeravalli, Stéphanie Gon, George Georgiou, Jon Beckwith

Proc Natl Acad Sci U S A. 2008 May 6; 105(18): 6735–6740. Published online 2008 May 2. doi: 10.1073/pnas.0801986105

PMCID:: PMC2373332

Abstract Article PDF–507K

Select item 22921775.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 22423826.

The origami of thioredoxin-like folds

Jonathan L. Pan, James C.A. Bardwell

Protein Sci. 2006 Oct; 15(10): 2217–2227. doi: 10.1110/ps.062268106

PMCID:: PMC2242382

Abstract Article PDF–517K

Select item 21442137.

Crystal structure of reduced thioredoxin reductase from Escherichia coli: structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor.

B. W. Lennon, C. H. Williams, Jr, M. L. Ludwig

Protein Sci. 1999 Nov; 8(11): 2366–2379. doi: 10.1110/ps.8.11.2366

PMCID:: PMC2144213

Summary PDF–4.9M

Select item 21440408.

Formation and properties of mixed disulfides between thioredoxin reductase from Escherichia coli and thioredoxin: evidence that cysteine-138 functions to initiate dithiol-disulfide interchange and to accept the reducing equivalent from reduced flavin.

D. M. Veine, S. B. Mulrooney, P. F. Wang, C. H. Williams, Jr

Protein Sci. 1998 Jun; 7(6): 1441–1450. doi: 10.1002/pro.5560070621

PMCID:: PMC2144040

Summary PDF–1.8M

Select item 17973099.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 168148110.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705211.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520012.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405