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Select item 112293321.

Maf1 phosphorylation is regulated through the action of prefoldin-like Bud27 on PP4 phosphatase in Saccharomyces cerevisiae

Francisco Gutiérrez-Santiago, Verónica Martínez-Fernández, Ana Isabel Garrido-Godino, Cristina Colino-Palomino, Andrés Clemente-Blanco, Christine Conesa, Joël Acker, Francisco Navarro

Nucleic Acids Res. 2024 Jul 8; 52(12): 7081–7095. Published online 2024 May 27. doi: 10.1093/nar/gkae414

PMCID:: PMC11229332

Abstract Article PDF–1.9M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 85769175.

Tubulin isotypes optimize distinct spindle positioning mechanisms during yeast mitosis

Emmanuel T. Nsamba, Abesh Bera, Michael Costanzo, Charles Boone, Mohan L. Gupta, Jr.

J Cell Biol. 2021 Dec 6; 220(12): e202010155. Published online 2021 Nov 5. doi: 10.1083/jcb.202010155

PMCID:: PMC8576917

Abstract Article PDF–7.4M

Select item 85616356.

A regulatory phosphorylation site on Mec1 controls chromatin occupancy of RNA polymerases during replication stress

Verena Hurst, Kiran Challa, Felix Jonas, Romain Forey, Ragna Sack, Jan Seebacher, Christoph D Schmid, Naama Barkai, Kenji Shimada, Susan M Gasser, Jérôme Poli

EMBO J. 2021 Nov 2; 40(21): e108439. Published online 2021 Sep 27. doi: 10.15252/embj.2021108439

PMCID:: PMC8561635

Abstract Article PDF–6.1M

Select item 84212047.

Investigation of RNA metabolism through large-scale genetic interaction profiling in yeast

Laurence Decourty, Christophe Malabat, Emmanuel Frachon, Alain Jacquier, Cosmin Saveanu

Nucleic Acids Res. 2021 Sep 7; 49(15): 8535–8555. Published online 2021 Aug 6. doi: 10.1093/nar/gkab680

PMCID:: PMC8421204

Abstract Article PDF–2.9M

Select item 77187518.

Comprehensive Synthetic Genetic Array Analysis of Alleles That Interact with Mutation of the Saccharomyces cerevisiae RecQ Helicases Hrq1 and Sgs1

Elsbeth Sanders, Phoebe A. Nguyen, Cody M. Rogers, Matthew L. Bochman

G3 (Bethesda) 2020 Dec; 10(12): 4359–4368. Published online 2020 Oct 28. doi: 10.1534/g3.120.401709

PMCID:: PMC7718751

Abstract Article PDF–1.2M

Select item 71043769.

Structural basis for RNA polymerase III transcription repression by Maf1

Matthias K. Vorländer, Florence Baudin, Robyn D. Moir, René Wetzel, Wim J. H. Hagen, Ian M. Willis, Christoph W. Müller

Nat Struct Mol Biol. Author manuscript; available in PMC 2020 Aug 17.

Published in final edited form as: Nat Struct Mol Biol. 2020 Mar; 27(3): 229–232. Published online 2020 Feb 17. doi: 10.1038/s41594-020-0383-y

PMCID:: PMC7104376

Abstract Article PDF–3.4M

Select item 690825910.

Inhibition of tRNA Gene Transcription by the Immunosuppressant Mycophenolic Acid

Aneta Jurkiewicz, Ewa Leśniewska, Małgorzata Cieśla, Neuton Gorjão, Theodoros Kantidakis, Robert J. White, Magdalena Boguta, Damian Graczyk

Mol Cell Biol. 2020 Jan; 40(1): e00294-19. Prepublished online 2019 Oct 28. Published online 2019 Dec 11. doi: 10.1128/MCB.00294-19

PMCID:: PMC6908259

Abstract Article PDF–2.7M

Select item 654913611.

Robust repression of tRNA gene transcription during stress requires protein arginine methylation

Richoo B Davis, Neah Likhite, Christopher A Jackson, Tao Liu, Michael C Yu

Life Sci Alliance. 2019 Jun; 2(3): e201800261. Published online 2019 Jun 3. doi: 10.26508/lsa.201800261

PMCID:: PMC6549136

Abstract Article PDF–2.0M

Select item 644813712.

Glycolytic flux in Saccharomyces cerevisiae is dependent on RNA polymerase III and its negative regulator Maf1

Roza Szatkowska, Manuel Garcia-Albornoz, Katarzyna Roszkowska, Stephen W. Holman, Emil Furmanek, Simon J. Hubbard, Robert J. Beynon, Malgorzata Adamczyk

Biochem J. 2019 Apr 15; 476(7): 1053–1082. Prepublished online 2019 Mar 18. Published online 2019 Apr 4. doi: 10.1042/BCJ20180701

PMCID:: PMC6448137

Abstract Article PDF–4.7M

Select item 642247313.

Coupling of RNA polymerase III assembly to cell cycle progression in Saccharomyces cerevisiae

Marta Płonka, Donata Wawrzycka, Robert Wysocki, Magdalena Boguta, Małgorzata Cieśla

Cell Cycle. 2019; 18(4): 500–510. Published online 2019 Feb 13. doi: 10.1080/15384101.2019.1578134

PMCID:: PMC6422473

Abstract Article PDF–1.3M

Select item 621571314.

Systematic Analysis of Complex Genetic Interactions

Elena Kuzmin, Benjamin VanderSluis, Wen Wang, Guihong Tan, Raamesh Deshpande, Yiqun Chen, Matej Usaj, Attila Balint, Mojca Mattiazzi Usaj, Jolanda van Leeuwen, Elizabeth N. Koch, Carles Pons, Andrius J. Dagilis, Michael Pryszlak, Jason Zi Yang Wang, Julia Hanchard, Margot Riggi, Kaicong Xu, Hamed Heydari, Bryan-Joseph San Luis, Ermira Shuteriqi, Hongwei Zhu, Nydia Van Dyk, Sara Sharifpoor, Michael Costanzo, Robbie Loewith, Amy Caudy, Daniel Bolnick, Grant W. Brown, Brenda J. Andrews, Charles Boone, Chad L. Myers

Science. Author manuscript; available in PMC 2018 Nov 4.

Published in final edited form as: Science. 2018 Apr 20; 360(6386): eaao1729. doi: 10.1126/science.aao1729

PMCID:: PMC6215713

Abstract Article PDF–1.9M

Select item 618215115.

Function of TFIIIC, RNA polymerase III initiation factor, in activation and repression of tRNA gene transcription

Małgorzata Cieśla, Ewa Skowronek, Magdalena Boguta

Nucleic Acids Res. 2018 Oct 12; 46(18): 9444–9455. Published online 2018 Jul 25. doi: 10.1093/nar/gky656

PMCID:: PMC6182151

Abstract Article PDF–1.5M

Select item 612869216.

Defective RNA polymerase III is negatively regulated by the SUMO-Ubiquitin-Cdc48 pathway

Zheng Wang, Catherine Wu, Aaron Aslanian, John R Yates, III, Tony Hunter

eLife. 2018; 7: e35447. Published online 2018 Sep 7. doi: 10.7554/eLife.35447

PMCID:: PMC6128692

Abstract Article PDF–6.9M

Select item 611694917.

A Genome-Wide Screen Reveals a Role for the HIR Histone Chaperone Complex in Preventing Mislocalization of Budding Yeast CENP-A

Sultan Ciftci-Yilmaz, Wei-Chun Au, Prashant K. Mishra, Jessica R. Eisenstatt, Joy Chang, Anthony R. Dawson, Iris Zhu, Mahfuzur Rahman, Sven Bilke, Michael Costanzo, Anastasia Baryshnikova, Chad L. Myers, Paul S. Meltzer, David Landsman, Richard E. Baker, Charles Boone, Munira A. Basrai

Genetics. 2018 Sep; 210(1): 203–218. Published online 2018 Jul 16. doi: 10.1534/genetics.118.301305

PMCID:: PMC6116949

Abstract Article PDF–2.1M

Select item 600332318.

Distributed and dynamic intracellular organization of extracellular information

Alejandro A. Granados, Julian M. J. Pietsch, Sarah A. Cepeda-Humerez, Iseabail L. Farquhar, Gašper Tkačik, Peter S. Swain

Proc Natl Acad Sci U S A. 2018 Jun 5; 115(23): 6088–6093. Published online 2018 May 21. doi: 10.1073/pnas.1716659115

PMCID:: PMC6003323

Abstract Article PDF–1.3M

Select item 589294319.

Lack of 2'-O-methylation in the tRNA anticodon loop of two phylogenetically distant yeast species activates the general amino acid control pathway

Lu Han, Michael P. Guy, Yoshiko Kon, Eric M. Phizicky

PLoS Genet. 2018 Mar; 14(3): e1007288. Published online 2018 Mar 29. doi: 10.1371/journal.pgen.1007288

PMCID:: PMC5892943

Abstract Article PDF–6.6M

Select item 576535920.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

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