PMC Links for GEO Profiles (Select 45411052) - PMC

Select item 112174001.

Base preference for inosine 3′-riboendonuclease activity of human endonuclease V: implications for cleavage of poly-A tails containing inosine

Kazuma Mitsuoka, Jung In Kim, Aya Yoshida, Akane Matsumoto, Narumi Aoki-Shioi, Shigenori Iwai, Isao Kuraoka

Sci Rep. 2024; 14: 14973. Published online 2024 Jun 28. doi: 10.1038/s41598-024-65814-7

PMCID:: PMC11217400

Abstract Article PDF–2.8M

Select item 81650302.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 68398373.

Complex alternative splicing of human Endonuclease V mRNA, but evidence for only a single protein isoform

Natalia Berges, Meh Sameen Nawaz, Tuva Børresdatter Dahl, Lars Hagen, Magnar Bjørås, Jon K. Laerdahl, Ingrun Alseth

PLoS One. 2019; 14(11): e0225081. Published online 2019 Nov 8. doi: 10.1371/journal.pone.0225081

PMCID:: PMC6839837

Abstract Article PDF–2.4M

Select item 56306004.

Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism

Giulia Antoniali, Fabrizio Serra, Lisa Lirussi, Mikiei Tanaka, Chiara D’Ambrosio, Shiheng Zhang, Slobodanka Radovic, Emiliano Dalla, Yari Ciani, Andrea Scaloni, Mengxia Li, Silvano Piazza, Gianluca Tell

Nat Commun. 2017; 8: 797. Published online 2017 Oct 6. doi: 10.1038/s41467-017-00842-8

PMCID:: PMC5630600

Abstract Article PDF–2.3M

Select item 55316115.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 50768466.

Regulation of Human Endonuclease V Activity and Relocalization to Cytoplasmic Stress Granules

Meh Sameen Nawaz, Erik Sebastian Vik, Natalia Berges, Cathrine Fladeby, Magnar Bjørås, Bjørn Dalhus, Ingrun Alseth

J Biol Chem. 2016 Oct 7; 291(41): 21786–21801. Published online 2016 Aug 29. doi: 10.1074/jbc.M116.730911

PMCID:: PMC5076846

Abstract Article PDF–2.9M

Select item 46479417.

hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes

Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal

Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012

PMCID:: PMC4647941

Abstract Article

Select item 46172118.

The BioPlex Network: A Systematic Exploration of the Human Interactome

Edward L. Huttlin, Lily Ting, Raphael J. Bruckner, Fana Gebreab, Melanie P. Gygi, John Szpyt, Stanley Tam, Gabriela Zarraga, Greg Colby, Kurt Baltier, Rui Dong, Virginia Guarani, Laura Pontano Vaites, Alban Ordureau, Ramin Rad, Brian K. Erickson, Martin Wühr, Joel Chick, Bo Zhai, Deepak Kolippakkam, Julian Mintseris, Robert A. Obar, Tim Harris, Spyros Artavanis-Tsakonas, Mathew E. Sowa, Pietro DeCamilli, Joao A. Paulo, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2016 Jul 16.

Published in final edited form as: Cell. 2015 Jul 16; 162(2): 425–440. doi: 10.1016/j.cell.2015.06.043

PMCID:: PMC4617211

Abstract Article PDF–2.2M

Select item 37416429.

Human endonuclease V is a ribonuclease specific for inosine-containing RNA

Yoko Morita, Toshihiro Shibutani, Nozomi Nakanishi, Kazuko Nishikura, Shigenori Iwai, Isao Kuraoka

Nat Commun. 2013 Aug 5; 4: 2273. Published online 2013 Aug 5. doi: 10.1038/ncomms3273

PMCID:: PMC3741642

Abstract Article PDF–2.0M

Select item 374163510.

Endonuclease V cleaves at inosines in RNA

Erik Sebastian Vik, Meh Sameen Nawaz, Pernille Strøm Andersen, Cathrine Fladeby, Magnar Bjørås, Bjørn Dalhus, Ingrun Alseth

Nat Commun. 2013 Aug 5; 4: 2271. Published online 2013 Aug 5. doi: 10.1038/ncomms3271

PMCID:: PMC3741635

Abstract Article PDF–1011K

Select item 348990711.

The Human Homolog of Escherichia coli Endonuclease V Is a Nucleolar Protein with Affinity for Branched DNA Structures

Cathrine Fladeby, Erik Sebastian Vik, Jon K. Laerdahl, Christine Gran Neurauter, Julie E. Heggelund, Eirik Thorgaard, Pernille Strøm-Andersen, Magnar Bjørås, Bjørn Dalhus, Ingrun Alseth

PLoS One. 2012; 7(11): e47466. Published online 2012 Nov 5. doi: 10.1371/journal.pone.0047466

PMCID:: PMC3489907

Abstract Article PDF–650K

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 310558713.

Xiaofan Zhang, Hushan Yang, J.Jack Lee, Edward Kim, Scott M. Lippman, Fadlo R. Khuri, Margaret R. Spitz, Reuben Lotan, Waun K. Hong, Xifeng Wu

Carcinogenesis. 2010 Dec; 31(12): 2118–2123. Published online 2010 Sep 5. doi: 10.1093/carcin/bgq177

PMCID:: PMC3105587

Abstract Article PDF–236K

Select item 16763314.

Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V

Ane Moe, Jeanette Ringvoll, Line M. Nordstrand, Lars Eide, Magnar Bjørås, Erling Seeberg, Torbjørn Rognes, Arne Klungland

Nucleic Acids Res. 2003 Jul 15; 31(14): 3893–3900. doi: 10.1093/nar/gkg472

PMCID:: PMC167633

Abstract Article PDF–284K

Select item 13924115.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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