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Select item 109177971.

A single-cell atlas of Drosophila trachea reveals glycosylation-mediated Notch signaling in cell fate specification

Yue Li, Tianfeng Lu, Pengzhen Dong, Jian Chen, Qiang Zhao, Yuying Wang, Tianheng Xiao, Honggang Wu, Quanyi Zhao, Hai Huang

Nat Commun. 2024; 15: 2019. Published online 2024 Mar 6. doi: 10.1038/s41467-024-46455-w

PMCID:: PMC10917797

Abstract Article PDF–5.3M

Select item 106634702.

A distinct Acyl-CoA binding protein (ACBP6) shapes tissue plasticity during nutrient adaptation in Drosophila

Xiaotong Li, Jason Karpac

Nat Commun. 2023; 14: 7599. Published online 2023 Nov 21. doi: 10.1038/s41467-023-43362-4

PMCID:: PMC10663470

Abstract Article PDF–6.8M

Select item 83842023.

Metabolomics provide new insights into mechanisms of Wolbachia-induced paternal defects in Drosophila melanogaster

Hua-Bao Zhang, Zheng Cao, Jun-Xue Qiao, Zi-Qian Zhong, Chen-Chen Pan, Chen Liu, Li-Min Zhang, Yu-Feng Wang

PLoS Pathog. 2021 Aug; 17(8): e1009859. Published online 2021 Aug 12. doi: 10.1371/journal.ppat.1009859

PMCID:: PMC8384202

Abstract Article PDF–3.8M

Select item 83190524.

RNA degradation is required for the germ-cell to maternal transition in Drosophila

Patrick Blatt, Siu Wah Wong-Deyrup, Alicia McCarthy, Shane Breznak, Matthew D. Hurton, Maitreyi Upadhyay, Benjamin Bennink, Justin Camacho, Miler T. Lee, Prashanth Rangan

Curr Biol. Author manuscript; available in PMC 2021 Jul 29.

Published in final edited form as: Curr Biol. 2021 Jul 26; 31(14): 2984–2994.e7. Published online 2021 May 13. doi: 10.1016/j.cub.2021.04.052

PMCID:: PMC8319052

Abstract Article PDF–2.2M

Select item 80422705.

Comprehensive Identification and Alternative Splicing of Microexons in Drosophila

Ting-Lin Pang, Zhan Ding, Shao-Bo Liang, Liang Li, Bei Zhang, Yu Zhang, Yu-Jie Fan, Yong-Zhen Xu

Front Genet. 2021; 12: 642602. Published online 2021 Mar 30. doi: 10.3389/fgene.2021.642602

PMCID:: PMC8042270

Abstract Article PDF–3.6M

Select item 74796206.

Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila

Bumsik Cho, Sang-Ho Yoon, Daewon Lee, Ferdinand Koranteng, Sudhir Gopal Tattikota, Nuri Cha, Mingyu Shin, Hobin Do, Yanhui Hu, Sue Young Oh, Daehan Lee, A. Vipin Menon, Seok Jun Moon, Norbert Perrimon, Jin-Wu Nam, Jiwon Shim

Nat Commun. 2020; 11: 4483. Published online 2020 Sep 8. doi: 10.1038/s41467-020-18135-y

PMCID:: PMC7479620

Abstract Article PDF–11M

Select item 69615787.

CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans

Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang

Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119

PMCID:: PMC6961578

Abstract Article PDF–3.6M

Select item 67580548.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 60858769.

The splicing factor RNA-binding Fox protein 1 mediates the cellular immune response in Drosophila melanogaster

Ashley E. Nazario-Toole, Javier Robalino, Kwame Okrah, Hector Corrada-Bravo, Stephen M. Mount, Louisa P. Wu

J Immunol. Author manuscript; available in PMC 2019 Aug 15.

Published in final edited form as: J Immunol. 2018 Aug 15; 201(4): 1154–1164. Published online 2018 Jul 11. doi: 10.4049/jimmunol.1800496

PMCID:: PMC6085876

Abstract Article PDF–866K

Select item 607860410.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 570780511.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900212.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 514468013.

Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs

Hongmei Li, Chuansheng Hu, Ling Bai, Hua Li, Mingfa Li, Xiaodong Zhao, Daniel M. Czajkowsky, Zhifeng Shao

DNA Res. 2016 Dec; 23(6): 571–580. Published online 2016 Aug 24. doi: 10.1093/dnares/dsw040

PMCID:: PMC5144680

Abstract Article PDF–688K

Select item 492804714.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 452833015.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832916.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 437305817.

Natural variation of gene models in Drosophila melanogaster

Yerbol Z Kurmangaliyev, Alexander V Favorov, Noha M Osman, Kjong-Van Lehmann, Daniel Campo, Matthew P Salomon, John Tower, Mikhail S Gelfand, Sergey V Nuzhdin

BMC Genomics. 2015; 16(1): 198. Published online 2015 Mar 17. doi: 10.1186/s12864-015-1415-6

PMCID:: PMC4373058

Abstract Article PDF–1.5M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152719.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 386112820.

Alcohol-Induced Histone Acetylation Reveals a Gene Network Involved in Alcohol Tolerance

Alfredo Ghezzi, Harish R. Krishnan, Linda Lew, Francisco J. Prado, III, Darryl S. Ong, Nigel S. Atkinson

PLoS Genet. 2013 Dec; 9(12): e1003986. Published online 2013 Dec 12. doi: 10.1371/journal.pgen.1003986

PMCID:: PMC3861128

Abstract Article PDF–972K

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