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Select item 108208371.

Organogenetic transcriptomes of the Drosophila embryo at single cell resolution

Da Peng, Dorian Jackson, Bianca Palicha, Eric Kernfeld, Nathaniel Laughner, Ashleigh Shoemaker, Susan E. Celniker, Rajprasad Loganathan, Patrick Cahan, Deborah J. Andrew

Development. 2024 Jan 15; 151(2): dev202097. Published online 2024 Jan 19. doi: 10.1242/dev.202097

PMCID:: PMC10820837

Abstract Article

Select item 106199802.

Experimentally induced active and quiet sleep engage non-overlapping transcriptional programs in Drosophila

Niki Anthoney, Lucy Tainton-Heap, Hang Luong, Eleni Notaras, Amber B Kewin, Qiongyi Zhao, Trent Perry, Philip Batterham, Paul J Shaw, Bruno van Swinderen

eLife. 2023; 12: RP88198. Published online 2023 Nov 1. doi: 10.7554/eLife.88198

PMCID:: PMC10619980

Abstract Article PDF–5.4M

Select item 105644523.

Scavenger receptor endocytosis controls apical membrane morphogenesis in the Drosophila airways

Ana Sofia Pinheiro, Vasilios Tsarouhas, Kirsten André Senti, Badrul Arefin, Christos Samakovlis

eLife. 2023; 12: e84974. Published online 2023 Sep 14. doi: 10.7554/eLife.84974

PMCID:: PMC10564452

Abstract Article PDF–12M

Select item 101674794.

Stress‐sensitive dynamics of miRNAs and Elba1 in Drosophila embryogenesis

Lovisa Örkenby, Signe Skog, Helen Ekman, Alessandro Gozzo, Unn Kugelberg, Rashmi Ramesh, Srivathsa Magadi, Gianluca Zambanini, Anna Nordin, Claudio Cantú, Daniel Nätt, Anita Öst

Mol Syst Biol. 2023 May; 19(5): e11148. Published online 2023 Mar 20. doi: 10.15252/msb.202211148

PMCID:: PMC10167479

Abstract Article PDF–3.0M

Select item 77684085.

Mud Loss Restricts Yki-Dependent Hyperplasia in Drosophila Epithelia

Amalia S. Parra, Christopher A. Johnston

J Dev Biol. 2020 Dec; 8(4): 34. Published online 2020 Dec 13. doi: 10.3390/jdb8040034

PMCID:: PMC7768408

Abstract Article PDF–2.3M

Select item 74297446.

Transcytosis via the late endocytic pathway as a cell morphogenetic mechanism

Renjith Mathew, L Daniel Rios‐Barrera, Pedro Machado, Yannick Schwab, Maria Leptin

EMBO J. 2020 Aug 17; 39(16): e105332. Published online 2020 Jul 13. doi: 10.15252/embj.2020105332

PMCID:: PMC7429744

Abstract Article PDF–10M

Select item 61769447.

rebuff regulates apical luminal matrix to control tube size in Drosophila trachea

Rachana R. Chandran, Aaron Scholl, Yuyang Yang, Lan Jiang

Biol Open. 2018 Sep 15; 7(9): bio036848. Published online 2018 Sep 15. doi: 10.1242/bio.036848

PMCID:: PMC6176944

Abstract Article PDF–2.7M

Select item 57157628.

Dual function for Tango1 in secretion of bulky cargo and in ER-Golgi morphology

L. D. Ríos-Barrera, S. Sigurbjörnsdóttir, M. Baer, M. Leptin

Proc Natl Acad Sci U S A. 2017 Nov 28; 114(48): E10389–E10398. Published online 2017 Nov 14. doi: 10.1073/pnas.1711408114

PMCID:: PMC5715762

Abstract Article PDF–2.2M

Select item 57078059.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900210.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 530735911.

A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons

Shlesha Richhariya, Siddharth Jayakumar, Katharine Abruzzi, Michael Rosbash, Gaiti Hasan

Sci Rep. 2017; 7: 42586. Published online 2017 Feb 14. doi: 10.1038/srep42586

PMCID:: PMC5307359

Abstract Article PDF–2.1M

Select item 493336912.

Regulation of the BMP Signaling-Responsive Transcriptional Network in the Drosophila Embryo

Lisa Deignan, Marco T. Pinheiro, Catherine Sutcliffe, Abbie Saunders, Scott G. Wilcockson, Leo A. H. Zeef, Ian J. Donaldson, Hilary L. Ashe

PLoS Genet. 2016 Jul; 12(7): e1006164. Published online 2016 Jul 5. doi: 10.1371/journal.pgen.1006164

PMCID:: PMC4933369

Abstract Article PDF–21M

Select item 492804713.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 483205814.

Microtubule-dependent balanced cell contraction and luminal-matrix modification accelerate epithelial tube fusion

Kagayaki Kato, Bo Dong, Housei Wada, Miho Tanaka-Matakatsu, Yoshimasa Yagi, Shigeo Hayashi

Nat Commun. 2016; 7: 11141. Published online 2016 Apr 12. doi: 10.1038/ncomms11141

PMCID:: PMC4832058

Abstract Article PDF–3.1M

Select item 478811615.

Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet

Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata

Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371

PMCID:: PMC4788116

Abstract Article PDF–4.7M

Select item 452833016.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832917.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 435288718.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 427152719.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 373717520.

Microarray Comparison of Anterior and Posterior Drosophila Wing Imaginal Disc Cells Identifies Novel Wing Genes

Daniel M. Ibrahim, Brian Biehs, Thomas B. Kornberg, Ansgar Klebes

G3 (Bethesda) 2013 Aug; 3(8): 1353–1362. Published online 2013 Aug 1. doi: 10.1534/g3.113.006569

PMCID:: PMC3737175

Abstract Article PDF–1.6M

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