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Items: 1 to 20 of 32

1.
Regulation of morphogen pathways by a Drosophila chondroitin sulfate proteoglycan Windpipe
Woo Seuk Koh, Collin Knudsen, Tomomi Izumikawa, Eriko Nakato, Kristin Grandt, Akiko Kinoshita-Toyoda, Hidenao Toyoda, Hiroshi Nakato
J Cell Sci. 2023 Apr 1; 136(7): jcs260525. Published online 2023 Apr 11. doi: 10.1242/jcs.260525
PMCID:
PMC10113886
AbstractArticle
2.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
3.
Neural Tissue Homeostasis and Repair Is Regulated via CS and DS Proteoglycan Motifs
Anthony J. Hayes, James Melrose
Front Cell Dev Biol. 2021; 9: 696640. Published online 2021 Aug 2. doi: 10.3389/fcell.2021.696640
PMCID:
PMC8365427
AbstractArticlePDF–2.5M
4.
The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis
Nigel S. Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y. Shen, Logan A. Walker, Wenjia Cao, Cheng-Yu Lee, Dawen Cai
Cell Rep. Author manuscript; available in PMC 2021 May 21.
Published in final edited form as: Cell Rep. 2021 Apr 27; 35(4): 109039. doi: 10.1016/j.celrep.2021.109039
PMCID:
PMC8139287
AbstractArticlePDF–1.6M
5.
Chondroitin sulfate proteoglycan Windpipe modulates Hedgehog signaling in Drosophila
Masahiko Takemura, Fredrik Noborn, Jonas Nilsson, Nanako Bowden, Eriko Nakato, Sarah Baker, Tsu-Yi Su, Göran Larson, Hiroshi Nakato
Mol Biol Cell. 2020 Apr 1; 31(8): 813–824. doi: 10.1091/mbc.E19-06-0327
PMCID:
PMC7185963
AbstractArticlePDF–2.8M
6.
Multiple genetic loci affect place learning and memory performance in Drosophila melanogaster
P.A. Williams-Simon, C. Posey, S. Mitchell, E. Ng’oma, J.A. Mrkvicka, T. Zars, E.G. King
Genes Brain Behav. Author manuscript; available in PMC 2020 Sep 1.
Published in final edited form as: Genes Brain Behav. 2019 Sep; 18(7): e12581. Published online 2019 May 31. doi: 10.1111/gbb.12581
PMCID:
PMC6718298
AbstractArticlePDF–1.8M
7.
JAK/STAT signaling in stem cells and regeneration: from Drosophila to vertebrates
Salvador C. Herrera, Erika A. Bach
Development. 2019 Jan 15; 146(2): dev167643. Published online 2019 Jan 29. doi: 10.1242/dev.167643
PMCID:
PMC6361132
AbstractArticle
8.
Refining a steroidogenic model: an analysis of RNA-seq datasets from insect prothoracic glands
Panagiotis Moulos, Alexandros Alexandratos, Ioannis Nellas, Skarlatos G. Dedos
BMC Genomics. 2018; 19: 537. Published online 2018 Jul 13. doi: 10.1186/s12864-018-4896-2
PMCID:
PMC6045881
AbstractArticlePDF–5.0M
9.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
10.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
11.
Phenotypes Associated with Second Chromosome P Element Insertions in Drosophila melanogaster
Lily Kahsai, Gillian H. Millburn, Kevin R. Cook
G3 (Bethesda) 2016 Aug; 6(8): 2665–2670. Published online 2016 Jun 10. doi: 10.1534/g3.116.030940
PMCID:
PMC4978919
AbstractArticlePDF–613K
12.
Proteomic Analysis of the Ubiquitin Landscape in the Drosophila Embryonic Nervous System and the Adult Photoreceptor Cells
Juanma Ramirez, Aitor Martinez, Benoit Lectez, So Young Lee, Maribel Franco, Rosa Barrio, Gunnar Dittmar, Ugo Mayor
PLoS One. 2015; 10(10): e0139083. Published online 2015 Oct 13. doi: 10.1371/journal.pone.0139083
PMCID:
PMC4604154
AbstractArticlePDF–3.1M
13.
The effect of neurospecific knockdown of candidate genes for locomotor behavior and sound production in Drosophila melanogaster
Sergey A Fedotov, Julia V Bragina, Natalia G Besedina, Larisa V Danilenkova, Elena A Kamysheva, Anna A Panova, Nikolai G Kamyshev
Fly (Austin) 2014 Jul; 8(3): 176–187. Published online 2014 Dec 13. doi: 10.4161/19336934.2014.983389
PMCID:
PMC4594543
AbstractArticlePDF–1.1M
14.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
15.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
16.
Plasma membrane overgrowth causes fibrotic collagen accumulation and immune activation in Drosophila adipocytes
Yiran Zang, Ming Wan, Min Liu, Hongmei Ke, Shuangchun Ma, Lu-Ping Liu, Jian-Quan Ni, José Carlos Pastor-Pareja
eLife. 2015; 4: e07187. Published online 2015 Jun 19. doi: 10.7554/eLife.07187
PMCID:
PMC4490375
AbstractArticlePDF–6.6M
17.
Windpipe Controls Drosophila Intestinal Homeostasis by Regulating JAK/STAT Pathway via Promoting Receptor Endocytosis and Lysosomal Degradation
Wenyan Ren, Yan Zhang, Min Li, Longfei Wu, Guolun Wang, Gyeong-Hun Baeg, Jia You, Zhouhua Li, Xinhua Lin
PLoS Genet. 2015 Apr; 11(4): e1005180. Published online 2015 Apr 29. doi: 10.1371/journal.pgen.1005180
PMCID:
PMC4414558
AbstractArticlePDF–2.8M
18.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
19.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
20.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M

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