PMC Links for GEO Profiles (Select 45740422) - PMC

Select item 109176601.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 106912322.

Gasdermin D is the only Gasdermin that provides protection against acute Salmonella gut infection in mice

Stefan A. Fattinger, Luca Maurer, Petra Geiser, Elliott M. Bernard, Ursina Enz, Suwannee Ganguillet, Ersin Gül, Sanne Kroon, Benjamin Demarco, Vanessa Mack, Markus Furter, Manja Barthel, Pawel Pelczar, Feng Shao, Petr Broz, Mikael E. Sellin, Wolf-Dietrich Hardt

Proc Natl Acad Sci U S A. 2023 Nov 28; 120(48): e2315503120. Published online 2023 Nov 21. doi: 10.1073/pnas.2315503120

PMCID:: PMC10691232

Abstract Article PDF–7.1M

Select item 93989643.

N⁶-Adenomethylation of GsdmC is essential for Lgr5⁺ stem cell survival to maintain normal colonic epithelial morphogenesis

Jie Du, Rajesh Sarkar, Yan Li, Lei He, Wenjun Kang, Wang Liao, Weicheng Liu, Tivoli Nguyen, Linda Zhang, Zifeng Deng, Urszula Dougherty, Sonia S. Kupfer, Mengjie Chen, Joel Pekow, Marc Bissonnette, Chuan He, Yan Chun Li

Dev Cell. Author manuscript; available in PMC 2023 Aug 22.

Published in final edited form as: Dev Cell. 2022 Aug 22; 57(16): 1976–1994.e8. Published online 2022 Aug 1. doi: 10.1016/j.devcel.2022.07.006

PMCID:: PMC9398964

Abstract Article PDF–2.0M

Select item 91094994.

Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C

Ming Zhao, Kaiqun Ren, Xiwen Xiong, Yue Xin, Yujie Zou, Jason C. Maynard, Angela Kim, Alexander P. Battist, Navya Koneripalli, Yusu Wang, Qianyue Chen, Ruyue Xin, Chenyan Yang, Rong Huang, Jiahui Yu, Zan Huang, Zengdi Zhang, Haiguang Wang, Daoyuan Wang, Yihui Xiao, Oscar C. Salgado, Nicholas N. Jarjour, Kristin A Hogquist, Xavier S. Revelo, Alma L. Burlingame, Xiang Gao, Jakob von Moltke, Zhaoyu Lin, Hai-Bin Ruan

Immunity. Author manuscript; available in PMC 2023 Apr 12.

Published in final edited form as: Immunity. 2022 Apr 12; 55(4): 623–638.e5. Published online 2022 Apr 5. doi: 10.1016/j.immuni.2022.03.009

Correction in:: Immunity. 2022 Jul 12; 55(7): 1327.

PMCID:: PMC9109499

Abstract Article PDF–3.3M

Select item 84107895.

The metabolite α-KG induces GSDMC-dependent pyroptosis through death receptor 6-activated caspase-8

Jia-yuan Zhang, Bo Zhou, Ru-yue Sun, Yuan-li Ai, Kang Cheng, Fu-nan Li, Bao-rui Wang, Fan-jian Liu, Zhi-hong Jiang, Wei-jia Wang, Dawang Zhou, Hang-zi Chen, Qiao Wu

Cell Res. 2021 Sep; 31(9): 980–997. Published online 2021 May 19. doi: 10.1038/s41422-021-00506-9

PMCID:: PMC8410789

Abstract Article PDF–6.3M

Select item 83894206.

A unique death pathway keeps RIPK1 D325A mutant mice in check at embryonic day 10.5

Yingying Zhang, Kai Huang, Yuxia Zhang, Tao Han, Lang Li, Chenchen Ruan, Ye-hsuan Sun, Wenke Shi, Wei Han, Su-qin Wu, Jing Song, Jun Liu, Jiahuai Han

PLoS Biol. 2021 Aug; 19(8): e3001304. Published online 2021 Aug 26. doi: 10.1371/journal.pbio.3001304

PMCID:: PMC8389420

Abstract Article PDF–3.7M

Select item 83252467.

Up-regulation of gasdermin C in mouse small intestine is associated with lytic cell death in enterocytes in worm-induced type 2 immunity

Ranhui Xi, Julia Montague, Xiaoli Lin, Chanyi Lu, Weiwei Lei, Keisuke Tanaka, Yali V. Zhang, Xin Xu, Xin Zheng, Xuedong Zhou, Joseph F. Urban, Jr, Ken Iwatsuki, Robert F. Margolskee, Ichiro Matsumoto, Marco Tizzano, Jiyao Li, Peihua Jiang

Proc Natl Acad Sci U S A. 2021 Jul 27; 118(30): e2026307118. Published online 2021 Jul 21. doi: 10.1073/pnas.2026307118

PMCID:: PMC8325246

Abstract Article PDF–1.9M

Select item 59266998.

Structure, Expression and Chromosome Mapping of MLZE, a Novel Gene Which Is Preferentially Expressed in Metastatic Melanoma Cells

Kenji Watabe, Akihiko Ito, Hideo Asada, Yuichi Endo, Toshiko Kobayashi, Ken'i Nakamoto, Satoshi Itami, Sonshin Takao, Yasuhisa Shinomura, Takashi Aikou, Kunihiko Yoshikawa, Yuji Matsuzawa, Yukihiko Kitamura, Hiroshi Nojima

Jpn J Cancer Res. 2001 Feb; 92(2): 140–151. doi: 10.1111/j.1349-7006.2001.tb01076.x

PMCID:: PMC5926699

Summary PDF–4.6M

Select item 51059469.

Gasdermin C Is Upregulated by Inactivation of Transforming Growth Factor β Receptor Type II in the Presence of Mutated Apc, Promoting Colorectal Cancer Proliferation

Masashi Miguchi, Takao Hinoi, Manabu Shimomura, Tomohiro Adachi, Yasufumi Saito, Hiroaki Niitsu, Masatoshi Kochi, Haruki Sada, Yusuke Sotomaru, Tsuneo Ikenoue, Kunitoshi Shigeyasu, Kohji Tanakaya, Yasuhiko Kitadai, Kazuhiro Sentani, Naohide Oue, Wataru Yasui, Hideki Ohdan

PLoS One. 2016; 11(11): e0166422. Published online 2016 Nov 11. doi: 10.1371/journal.pone.0166422

PMCID:: PMC5105946

Abstract Article PDF–2.8M

Select item 357241010.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 332818211.

Identification of molecular compartments and genetic circuitry in the developing mammalian kidney

Jing Yu, M. Todd Valerius, Mary Duah, Karl Staser, Jennifer K. Hansard, Jin-jin Guo, Jill McMahon, Joe Vaughan, Diane Faria, Kylie Georgas, Bree Rumballe, Qun Ren, A. Michaela Krautzberger, Jan P. Junker, Rathi D. Thiagarajan, Philip Machanick, Paul A. Gray, Alexander van Oudenaarden, David H. Rowitch, Charles D. Stiles, Qiufu Ma, Sean M. Grimmond, Timothy L. Bailey, Melissa H. Little, Andrew P. McMahon

Development. 2012 May 15; 139(10): 1863–1873. doi: 10.1242/dev.074005

PMCID:: PMC3328182

Abstract Article

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 265306113.

Atlas of Gene Expression in the Developing Kidney at Microanatomic Resolution

Eric W. Brunskill, Bruce J. Aronow, Kylie Georgas, Bree Rumballe, M. Todd Valerius, Jeremy Aronow, Vivek Kaimal, Anil G. Jegga, Sean Grimmond, Andrew P. McMahon, Larry T. Patterson, Melissa H. Little, S. Steven Potter

Dev Cell. Author manuscript; available in PMC 2009 Nov 1.

Published in final edited form as: Dev Cell. 2008 Nov; 15(5): 781–791. doi: 10.1016/j.devcel.2008.09.007

Correction in:: volume 16 on page 482

PMCID:: PMC2653061

Abstract Article PDF–4.9M

Select item 31099214.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098015.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924116.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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