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Select item 108724771.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001382.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 106812593.

eIF2A represses cell wall biogenesis gene expression in Saccharomyces cerevisiae

Laura Meyer, Baptiste Courtin, Maïté Gomard, Abdelkader Namane, Emmanuelle Permal, Gwenael Badis, Alain Jacquier, Micheline Fromont-Racine

PLoS One. 2023; 18(11): e0293228. Published online 2023 Nov 27. doi: 10.1371/journal.pone.0293228

PMCID:: PMC10681259

Abstract Article PDF–2.5M

Select item 99305284.

SWR1 chromatin remodeling complex prevents mitotic slippage during spindle position checkpoint arrest

Ayse Koca Caydasi, Anton Khmelinskii, Zoulfia Darieva, Bahtiyar Kurtulmus, Michael Knop, Gislene Pereira

Mol Biol Cell. 2023 Feb 1; 34(2): ar11. Published online 2023 Jan 13. doi: 10.1091/mbc.E20-03-0179

PMCID:: PMC9930528

Abstract Article PDF–8.4M

Select item 96380285.

Yeast Smy2 and its human homologs GIGYF1 and -2 regulate Cdc48/VCP function during transcription stress

Michelle Harreman Lehner, Jane Walker, Kotryna Temcinaite, Anna Herlihy, Michael Taschner, Adam C. Berger, Anita H. Corbett, A. Barbara Dirac Svejstrup, Jesper Q. Svejstrup

Cell Rep. 2022 Oct 25; 41(4): 111536. Published online 2022 Oct 25. doi: 10.1016/j.celrep.2022.111536

PMCID:: PMC9638028

Abstract Article

Select item 92098116.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 72898487.

Cell size sets the diameter of the budding yeast contractile ring

I. V. Kukhtevich, N. Lohrberg, F. Padovani, R. Schneider, K. M. Schmoller

Nat Commun. 2020; 11: 2952. Published online 2020 Jun 11. doi: 10.1038/s41467-020-16764-x

PMCID:: PMC7289848

Abstract Article PDF–5.6M

Select item 72597928.

Humanization of yeast genes with multiple human orthologs reveals functional divergence between paralogs

Jon M. Laurent, Riddhiman K. Garge, Ashley I. Teufel, Claus O. Wilke, Aashiq H. Kachroo, Edward M. Marcotte

PLoS Biol. 2020 May; 18(5): e3000627. Published online 2020 May 18. doi: 10.1371/journal.pbio.3000627

PMCID:: PMC7259792

Abstract Article PDF–2.8M

Select item 66488959.

Tsr4 and Nap1, two novel members of the ribosomal protein chaperOME

Ingrid Rössler, Julia Embacher, Benjamin Pillet, Guillaume Murat, Laura Liesinger, Jutta Hafner, Julia Judith Unterluggauer, Ruth Birner-Gruenberger, Dieter Kressler, Brigitte Pertschy

Nucleic Acids Res. 2019 Jul 26; 47(13): 6984–7002. Published online 2019 May 7. doi: 10.1093/nar/gkz317

PMCID:: PMC6648895

Abstract Article PDF–14M

Select item 621627710.

A role for Mog1 in H2Bub1 and H3K4me3 regulation affecting RNAPII transcription and mRNA export

Paula Oliete‐Calvo, Joan Serrano‐Quílez, Carme Nuño‐Cabanes, María E Pérez‐Martínez, Luis M Soares, Bernhard Dichtl, Stephen Buratowski, José E Pérez‐Ortín, Susana Rodríguez‐Navarro

EMBO Rep. 2018 Nov; 19(11): e45992. Published online 2018 Sep 24. doi: 10.15252/embr.201845992

PMCID:: PMC6216277

Abstract Article PDF–1.7M

Select item 619304711.

Recruitment of the mitotic exit network to yeast centrosomes couples septin displacement to actomyosin constriction

Davide Tamborrini, Maria Angeles Juanes, Sandy Ibanes, Giulia Rancati, Simonetta Piatti

Nat Commun. 2018; 9: 4308. Published online 2018 Oct 17. doi: 10.1038/s41467-018-06767-0

PMCID:: PMC6193047

Abstract Article PDF–4.0M

Select item 618217612.

Mud2 functions in transcription by recruiting the Prp19 and TREX complexes to transcribed genes

Rashmi Minocha, Varvara Popova, Daria Kopytova, Danny Misiak, Stefan Hüttelmaier, Sofia Georgieva, Katja Sträßer

Nucleic Acids Res. 2018 Oct 12; 46(18): 9749–9763. Published online 2018 Jul 24. doi: 10.1093/nar/gky640

Correction in:: Nucleic Acids Res. 2018 Oct 12; 46(18): 9890.

PMCID:: PMC6182176

Abstract Article PDF–1.0M

Select item 606711513.

Influence of the bud neck on nuclear envelope fission in Saccharomyces cerevisiae

Patricia G. Melloy, Mark D. Rose

Exp Cell Res. Author manuscript; available in PMC 2018 Sep 15.

Published in final edited form as: Exp Cell Res. 2017 Sep 15; 358(2): 390–396. Published online 2017 Jul 13. doi: 10.1016/j.yexcr.2017.07.013

PMCID:: PMC6067115

Abstract Article PDF–724K

Select item 600457914.

Role of the Hof1–Cyk3 interaction in cleavage-furrow ingression and primary-septum formation during yeast cytokinesis

Meng Wang, Ryuichi Nishihama, Masayuki Onishi, John R. Pringle

Mol Biol Cell. 2018 Mar 1; 29(5): 597–609. doi: 10.1091/mbc.E17-04-0227

PMCID:: PMC6004579

Abstract Article PDF–2.3M

Select item 589507315.

Cell polarity protein Spa2 coordinates Chs2 incorporation at the division site in budding yeast

Magdalena Foltman, Yasmina Filali-Mouncef, Damaso Crespo, Alberto Sanchez-Diaz

PLoS Genet. 2018 Mar; 14(3): e1007299. Published online 2018 Mar 30. doi: 10.1371/journal.pgen.1007299

PMCID:: PMC5895073

Abstract Article PDF–8.8M

Select item 576535916.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 538928817.

Comprehensive and quantitative mapping of RNA–protein interactions across a transcribed eukaryotic genome

Richard She, Anupam K. Chakravarty, Curtis J. Layton, Lauren M. Chircus, Johan O. L. Andreasson, Nandita Damaraju, Peter L. McMahon, Jason D. Buenrostro, Daniel F. Jarosz, William J. Greenleaf

Proc Natl Acad Sci U S A. 2017 Apr 4; 114(14): 3619–3624. Published online 2017 Mar 21. doi: 10.1073/pnas.1618370114

PMCID:: PMC5389288

Abstract Article PDF–1.3M

Select item 520434818.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116