PMC Links for GEO Profiles (Select 4717324) - PMC

Robert Wilson, Stefan H. Geyer, Lukas Reissig, Julia Rose, Dorota Szumska, Emily Hardman, Fabrice Prin, Christina McGuire, Ramiro Ramirez-Solis, Jacqui White, Antonella Galli, Catherine Tudor, Elizabeth Tuck, Cecilia Icoresi Mazzeo, James C. Smith, Elizabeth Robertson, David J. Adams, Timothy Mohun, Wolfgang J. Weninger

Version 2. Wellcome Open Res. 2016; 1: 1. Published online 2017 Feb 27. doi: 10.12688/wellcomeopenres.9899.2

PMCID:: PMC5159622

Abstract Article PDF–7.4M

Select item 42459514.

Opposing roles of mitochondrial and nuclear PARP1 in the regulation of mitochondrial and nuclear DNA integrity: implications for the regulation of mitochondrial function

Bartosz Szczesny, Attila Brunyanszki, Gabor Olah, Sankar Mitra, Csaba Szabo

Nucleic Acids Res. 2014 Dec 1; 42(21): 13161–13173. Published online 2014 Nov 5. doi: 10.1093/nar/gku1089

PMCID:: PMC4245951

Abstract Article PDF–624K

Select item 39169675.

Mutation of POL B Causes Lupus in Mice

Alireza G. Senejani, Yanfeng Liu, Dawit Kidane, Stephen E. Maher, Caroline J Zeiss, Hong-Jae Park, Michael Kashgarian, Jennifer M. McNiff, Daniel Zelterman, Alfred L. M. Bothwell, Joann B. Sweasy

Cell Rep. Author manuscript; available in PMC 2015 Jan 16.

Published in final edited form as: Cell Rep. 2014 Jan 16; 6(1): 1–8. Published online 2014 Jan 2. doi: 10.1016/j.celrep.2013.12.017

PMCID:: PMC3916967

Abstract Article PDF–4.3M

Select item 37331176.

Structural Changes in the Hydrophobic Hinge Region Adversely Affect the Activity and Fidelity of the I260Q Mutator DNA Polymerase β

Chelsea L. Gridley, Sneha Rangarajan, Susan Firbank, Shibani Dalal, Joann B. Sweasy, Joachim Jaeger

Biochemistry. Author manuscript; available in PMC 2013 Dec 25.

Published in final edited form as: Biochemistry. 2013 Jun 25; 52(25): 4422–4432. Published online 2013 Jun 12. doi: 10.1021/bi301368f

PMCID:: PMC3733117

Abstract Article PDF–1.4M

Select item 33837787.

Unfavorable electrostatic and steric interactions in DNA polymerase β E295K mutant interfere with the enzyme’s pathway

Yunlang Li, Chelsea L. Gridley, Joachim Jaeger, Joann B. Sweasy, Tamar Schlick

J Am Chem Soc. Author manuscript; available in PMC 2013 Jun 20.

Published in final edited form as: J Am Chem Soc. 2012 Jun 20; 134(24): 9999–10010. Published online 2012 Jun 11. doi: 10.1021/ja300361r

PMCID:: PMC3383778

Abstract Article PDF–3.8M

Select item 31780598.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 28724049.

Oxidation state of the XRCC1 N-terminal domain regulates DNA polymerase β binding affinity

Matthew J. Cuneo, Robert E. London

Proc Natl Acad Sci U S A. 2010 Apr 13; 107(15): 6805–6810. Published online 2010 Mar 29. doi: 10.1073/pnas.0914077107

PMCID:: PMC2872404

Abstract Article PDF–487K

Select item 284020710.

Hinge Residue I174 is Critical for Proper dNTP Selection by DNA Polymerase β

Jen Yamtich, Daniela Starcevic, Julia Lauper, Elenoe Smith, Idina Shi, Sneha Rangarajan, Joachim Jaeger, Joann B. Sweasy

Biochemistry. Author manuscript; available in PMC 2010 Sep 23.

Published in final edited form as: Biochemistry. 2010 Mar 23; 49(11): 2326–2334. doi: 10.1021/bi901735a

PMCID:: PMC2840207

Abstract Article PDF–1.6M

Select item 277108111.

Ubiquitin ligase ARF-BP1/Mule modulates base excision repair

Jason L Parsons, Phillip S Tait, David Finch, Irina I Dianova, Mariola J Edelmann, Svetlana V Khoronenkova, Benedikt M Kessler, Ricky A Sharma, W Gillies McKenna, Grigory L Dianov

EMBO J. 2009 Oct 21; 28(20): 3207–3215. Published online 2009 Aug 27. doi: 10.1038/emboj.2009.243

PMCID:: PMC2771081

Abstract Article PDF–1.0M

Select item 267671712.

NMR Assignment of Polymerase ß labeled with ²H, ¹³C, and ¹⁵N in complex with substrate DNA

Geoffrey A. Mueller, Eugene F. DeRose, Thomas W. Kirby, Robert E. London

Biomol NMR Assign. Author manuscript; available in PMC 2009 May 4.

Published in final edited form as: Biomol NMR Assign. 2007; 1(1): 33–35. doi: 10.1007/s12104-007-9007-2

PMCID:: PMC2676717

Abstract Article PDF–191K

Select item 265371113.

Loop II of DNA Polymerase Beta is Important for Discrimination During Substrate Binding

George C. Lin, Joachim Jaeger, Kristin A. Eckert, Joann B Sweasy

DNA Repair (Amst) Author manuscript; available in PMC 2010 Feb 1.

Published in final edited form as: DNA Repair (Amst). 2009 Feb 1; 8(2): 182–189. Published online 2008 Dec 5. doi: 10.1016/j.dnarep.2008.10.006

PMCID:: PMC2653711

Abstract Article PDF–1.1M

Select item 189218314.

Effects of base excision repair gene polymorphisms on pancreatic cancer survival

Donghui Li, Yanan Li, Li Jiao, David Z. Chang, Garth Beinart, Robert A. Wolff, Douglas B. Evans, Manal M. Hassan, James L. Abbruzzese

Int J Cancer. Author manuscript; available in PMC 2007 Jun 15.

Published in final edited form as: Int J Cancer. 2007 Apr 15; 120(8): 1748–1754. doi: 10.1002/ijc.22301

PMCID:: PMC1892183

Abstract Article PDF–300K

Select item 52222215.

p53 Deficiency Rescues Neuronal Apoptosis but Not Differentiation in DNA Polymerase β-Deficient Mice

Noriyuki Sugo, Naoko Niimi, Yasuaki Aratani, Keiko Takiguchi-Hayashi, Hideki Koyama

Mol Cell Biol. 2004 Nov; 24(21): 9470–9477. doi: 10.1128/MCB.24.21.9470-9477.2004

PMCID:: PMC522222

Abstract Article PDF–686K

Select item 36531216.

Murine DNA polymerase beta gene: mapping of transcription initiation sites and the nucleotide sequence of the putative promoter region.

M Yamaguchi, F Hirose, Y Hayashi, Y Nishimoto, A Matsukage

Mol Cell Biol. 1987 May; 7(5): 2012–2018. doi: 10.1128/mcb.7.5.2012

PMCID:: PMC365312

Summary Page Browse PDF–2.0M

Select item 34304317.

Regenerating rat liver DNA polymerases: disimilitude or relationship between nuclear and cytoplasmic enzymes?

A M de Recondo, J Abadiedebat

Nucleic Acids Res. 1976 Aug; 3(8): 1823–1837. doi: 10.1093/nar/3.8.1823

PMCID:: PMC343043

Summary Page Browse PDF–1.0M

Select item 33424318.

Two regions in human DNA polymerase beta mRNA suppress translation in Escherichia coli.

T Date, K Tanihara, S Yamamoto, N Nomura, A Matsukage

Nucleic Acids Res. 1992 Sep 25; 20(18): 4859–4864. doi: 10.1093/nar/20.18.4859

PMCID:: PMC334243

Summary Page Browse PDF–1.4M

Select item 32389919.

Structure of rat DNA polymerase beta revealed by partial amino acid sequencing and cDNA cloning.

B Z Zmudzka, D SenGupta, A Matsukage, F Cobianchi, P Kumar, S H Wilson

Proc Natl Acad Sci U S A. 1986 Jul; 83(14): 5106–5110. doi: 10.1073/pnas.83.14.5106

PMCID:: PMC323899

Summary Page Browse PDF–1.0M

Select item 13924120.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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