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Items: 1 to 20 of 64

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
2.
Tau-induced deficits in nonsense-mediated mRNA decay contribute to neurodegeneration
Gabrielle Zuniga, Simon Levy, Paulino Ramirez, Jasmine De Mange, Elias Gonzalez, Maria Gamez, Bess Frost
Alzheimers Dement. Author manuscript; available in PMC 2023 Feb 16.
Published in final edited form as: Alzheimers Dement. 2023 Feb; 19(2): 405–420. Published online 2022 Apr 13. doi: 10.1002/alz.12653
PMCID:
PMC9673995
AbstractArticlePDF–1.9M
3.
Regulation of Archease by the mTOR-vATPase axis
Deanne Francis, Alondra S. Burguete, Amin S. Ghabrial
Development. 2022 Oct 1; 149(19): dev200908. Published online 2022 Oct 7. doi: 10.1242/dev.200908
PMCID:
PMC9641670
AbstractArticle
4.
The RNA-binding protein Swm is critical for Drosophila melanogaster intestinal progenitor cell maintenance
Ishara S Ariyapala, Kasun Buddika, Heather A Hundley, Brian R Calvi, Nicholas S Sokol
Genetics. 2022 Oct; 222(2): iyac099. Published online 2022 Jun 28. doi: 10.1093/genetics/iyac099
PMCID:
PMC9526066
AbstractArticlePDF–1.4M
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
Nuclear transport genes recurrently duplicate by means of RNA intermediates in Drosophila but not in other insects
Ayda Mirsalehi, Dragomira N. Markova, Mohammadmehdi Eslamieh, Esther Betrán
BMC Genomics. 2021; 22: 876. Published online 2021 Dec 5. doi: 10.1186/s12864-021-08170-4
PMCID:
PMC8645118
AbstractArticlePDF–2.4M
7.
piRNA‐ and siRNA‐mediated transcriptional repression in Drosophila, mice, and yeast: new insights and biodiversity
Ryo Onishi, Soichiro Yamanaka, Mikiko C Siomi
EMBO Rep. 2021 Oct 5; 22(10): e53062. Published online 2021 Aug 4. doi: 10.15252/embr.202153062
PMCID:
PMC8490990
AbstractArticlePDF–923K
8.
Channel nuclear pore complex subunits are required for transposon silencing in Drosophila
Marzia Munafò, Victoria R Lawless, Alessandro Passera, Serena MacMillan, Susanne Bornelöv, Irmgard U Haussmann, Matthias Soller, Gregory J Hannon, Benjamin Czech
eLife. 2021; 10: e66321. Published online 2021 Apr 15. doi: 10.7554/eLife.66321
PMCID:
PMC8133776
AbstractArticlePDF–2.6M
9.
Roles for RNA export factor, Nxt1, in ensuring muscle integrity and normal RNA expression in Drosophila
Kevin van der Graaf, Katia Jindrich, Robert Mitchell, Helen White-Cooper
G3 (Bethesda) 2021 Jan; 11(1): jkaa046. Published online 2020 Dec 24. doi: 10.1093/g3journal/jkaa046
PMCID:
PMC8022728
AbstractArticlePDF–3.3M
10.
Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex
Jakob Schnabl, Juncheng Wang, Ulrich Hohmann, Maja Gehre, Julia Batki, Veselin I. Andreev, Kim Purkhauser, Nina Fasching, Peter Duchek, Maria Novatchkova, Karl Mechtler, Clemens Plaschka, Dinshaw J. Patel, Julius Brennecke
Genes Dev. 2021 Mar 1; 35(5-6): 392–409. doi: 10.1101/gad.347989.120
PMCID:
PMC7919418
AbstractArticlePDF–15M
11.
Dimerisation of the PICTS complex via LC8/Cut-up drives co-transcriptional transposon silencing in Drosophila
Evelyn L Eastwood, Kayla A Jara, Susanne Bornelöv, Marzia Munafò, Vasileios Frantzis, Emma Kneuss, Elisar J Barbar, Benjamin Czech, Gregory J Hannon
eLife. 2021; 10: e65557. Published online 2021 Feb 4. doi: 10.7554/eLife.65557
PMCID:
PMC7861614
AbstractArticlePDF–4.2M
12.
Roles of piRNAs in transposon and pseudogene regulation of germline mRNAs and lncRNAs
Chen Wang, Haifan Lin
Genome Biol. 2021; 22: 27. Published online 2021 Jan 8. doi: 10.1186/s13059-020-02221-x
PMCID:
PMC7792047
AbstractArticlePDF–1.8M
13.
Diverse Defenses: A Perspective Comparing Dipteran Piwi-piRNA Pathways
Stephanie Gamez, Satyam Srivastav, Omar S. Akbari, Nelson C. Lau
Cells. 2020 Oct; 9(10): 2180. Published online 2020 Sep 27. doi: 10.3390/cells9102180
PMCID:
PMC7601171
AbstractArticlePDF–2.4M
14.
The piRNA pathway in Drosophila ovarian germ and somatic cells
Kaoru SATO, Mikiko C. SIOMI
Proc Jpn Acad Ser B Phys Biol Sci. 2020 Jan 10; 96(1): 32–42. doi: 10.2183/pjab.96.003
PMCID:
PMC6974405
AbstractArticlePDF–2.3M
15.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
16.
Assembly and Function of Gonad-Specific Non-Membranous Organelles in Drosophila piRNA Biogenesis
Shigeki Hirakata, Mikiko C. Siomi
Noncoding RNA. 2019 Dec; 5(4): 52. Published online 2019 Nov 6. doi: 10.3390/ncrna5040052
PMCID:
PMC6958439
AbstractArticlePDF–1.6M
17.
The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation
Julia Batki, Jakob Schnabl, Juncheng Wang, Dominik Handler, Veselin I. Andreev, Christian E. Stieger, Maria Novatchkova, Lisa Lampersberger, Kotryna Kauneckaite, Wei Xie, Karl Mechtler, Dinshaw J. Patel, Julius Brennecke
Nat Struct Mol Biol. Author manuscript; available in PMC 2020 Feb 5.
Published in final edited form as: Nat Struct Mol Biol. 2019 Aug; 26(8): 720–731. Published online 2019 Aug 5. doi: 10.1038/s41594-019-0270-6
PMCID:
PMC6828549
AbstractArticlePDF–2.8M
18.
Specialization of the Drosophila nuclear export family protein Nxf3 for piRNA precursor export
Emma Kneuss, Marzia Munafò, Evelyn L. Eastwood, Undine-Sophie Deumer, Jonathan B. Preall, Gregory J. Hannon, Benjamin Czech
Genes Dev. 2019 Sep 1; 33(17-18): 1208–1220. doi: 10.1101/gad.328690.119
PMCID:
PMC6719614
AbstractArticlePDF–19M
19.
Nuclear RNA export factor variant initiates piRNA‐guided co‐transcriptional silencing
Kensaku Murano, Yuka W Iwasaki, Hirotsugu Ishizu, Akane Mashiko, Aoi Shibuya, Shu Kondo, Shungo Adachi, Saori Suzuki, Kuniaki Saito, Tohru Natsume, Mikiko C Siomi, Haruhiko Siomi
EMBO J. 2019 Sep 2; 38(17): e102870. Published online 2019 Aug 1. doi: 10.15252/embj.2019102870
PMCID:
PMC6717896
AbstractArticlePDF–2.2M
20.
piRNA-guided co-transcriptional silencing coopts nuclear export factors
Martin H Fabry, Filippo Ciabrelli, Marzia Munafò, Evelyn L Eastwood, Emma Kneuss, Ilaria Falciatori, Federica A Falconio, Gregory J Hannon, Benjamin Czech
eLife. 2019; 8: e47999. Published online 2019 Jun 20. doi: 10.7554/eLife.47999
PMCID:
PMC6677536
AbstractArticlePDF–1.8M

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