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Items: 1 to 20 of 22

1.
Functional genomic landscape of cancer-intrinsic evasion of killing by T cells
Keith A. Lawson, Cristovão M. Sousa, Xiaoyu Zhang, Eiru Kim, Rummy Akthar, Joseph J. Caumanns, Yuxi Yao, Nicholas Mikolajewicz, Catherine Ross, Kevin R. Brown, Abdelrahman Abou Zid, Zi Peng Fan, Shirley Hui, Jordan A. Krall, Donald M. Simons, Chloe J. Slater, Victor De Jesus, Lujia Tang, Richa Singh, Joshua E. Goldford, Sarah Martin, Qian Huang, Elizabeth A. Francis, Andrea Habsid, Ryan Climie, David Tieu, Jiarun Wei, Ren Li, Amy Hin Yan Tong, Michael Aregger, Katherine S. Chan, Hong Han, Xiaowei Wang, Patricia Mero, John H. Brumell, Antonio Finelli, Laurie Ailles, Gary Bader, Gromoslaw A. Smolen, Gillian A. Kingsbury, Traver Hart, Charles Kung, Jason Moffat
Nature. Author manuscript; available in PMC 2022 Apr 18.
Published in final edited form as: Nature. 2020 Oct; 586(7827): 120–126. Published online 2020 Sep 23. doi: 10.1038/s41586-020-2746-2
PMCID:
PMC9014559
AbstractArticlePDF–6.6M
2.
ATG5 is required for B cell polarization and presentation of particulate antigens
Florent Arbogast, Johan Arnold, Philippe Hammann, Lauriane Kuhn, Johana Chicher, Diane Murera, Justine Weishaar, Sylviane Muller, Jean-Daniel Fauny, Frédéric Gros
Autophagy. 2019; 15(2): 280–294. Published online 2018 Sep 22. doi: 10.1080/15548627.2018.1516327
PMCID:
PMC6333460
AbstractArticlePDF–2.7M
3.
Short-lived AUF1 p42-binding mRNAs of RANKL and BCL6 have two distinct instability elements each
Afzal M. Dogar, Ramona Pauchard-Batschulat, Barbara Grisoni-Neupert, Larry Richman, Alexandra Paillusson, Sylvain Pradervand, Otto Hagenbüchle, Giovanna Ambrosini, Christoph D. Schmid, Philipp Bucher, Lukas C. Kühn
PLoS One. 2018; 13(11): e0206823. Published online 2018 Nov 12. doi: 10.1371/journal.pone.0206823
PMCID:
PMC6231638
AbstractArticlePDF–3.8M
4.
Down‐regulation of cardiac lineage protein (CLP‐1) expression in CLP‐1 +/− mice affords cardioprotection against ischaemic stress
Eduardo Mascareno, Irena Manukyan, Dipak K. Das, M. A. Q. Siddiqui
J Cell Mol Med. 2009 Aug; 13(8b): 2744–2753. Published online 2008 Jul 9. doi: 10.1111/j.1582-4934.2008.00404.x
PMCID:
PMC4940775
AbstractArticlePDF–967K
5.
Hexim1, a Novel Regulator of Leptin Function, Modulates Obesity and Glucose Disposal
Manya Dhar-Mascareno, Susan N. Ramirez, Inna Rozenberg, Yves Rouille, John G. Kral, Eduardo J. Mascareno
Mol Endocrinol. 2016 Mar; 30(3): 314–324. Published online 2016 Feb 9. doi: 10.1210/me.2015-1211
PMCID:
PMC4771697
AbstractArticle
6.
SR Proteins Collaborate with 7SK and Promoter-Associated Nascent RNA to Release Paused Polymerase
Xiong Ji, Yu Zhou, Shatakshi Pandit, Jie Huang, Hairi Li, Charles Y. Lin, Rui Xiao, Christopher B. Burge, Xiang-Dong Fu
Cell. Author manuscript; available in PMC 2014 Jul 18.
Published in final edited form as: Cell. 2013 May 9; 153(4): 855–868. doi: 10.1016/j.cell.2013.04.028
PMCID:
PMC4103662
AbstractArticlePDF–1.0M
7.
Inducible re-expression of HEXIM1 causes physiological cardiac hypertrophy in the adult mouse
Monica M. Montano, Candida L. Desjardins, Yong Qui Doughman, Yee-Hsee Hsieh, Yanduan Hu, Heather M. Bensinger, Connie Wang, Julian E. Stelzer, Thomas E. Dick, Brian D. Hoit, Margaret P. Chandler, Xin Yu, Michiko Watanabe
Cardiovasc Res. 2013 Jul 1; 99(1): 74–82. Published online 2013 Apr 11. doi: 10.1093/cvr/cvt086
PMCID:
PMC3687752
AbstractArticlePDF–872K
8.
Inhibition of metastasis by HEXIM1 through effects on cell invasion and angiogenesis
Wannarasmi Ketchart, Kerri M. Smith, Tianyi Krupka, Bryan M. Wittmann, Yanduan Hu, Patricia A. Rayman, Yong Qiu Doughman, Jeffrey M. Albert, Xiadong Bai, James H. Finke, Yan Xu, Agata A. Exner, Monica M. Montano
Oncogene. Author manuscript; available in PMC 2014 Feb 15.
Published in final edited form as: Oncogene. 2013 Aug 15; 32(33): 3829–3839. Published online 2012 Sep 10. doi: 10.1038/onc.2012.405
PMCID:
PMC3525740
AbstractArticlePDF–2.6M
9.
Cell cycle gene-specific control of transcription has a critical role in proliferation of primordial germ cells
Daiji Okamura, Ikuma Maeda, Hirofumi Taniguchi, Yuko Tokitake, Makiko Ikeda, Keiko Ozato, Nathan Mise, Kuniya Abe, Toshiaki Noce, Juan Carlos Izpisua Belmonte, Yasuhisa Matsui
Genes Dev. 2012 Nov 15; 26(22): 2477–2482. doi: 10.1101/gad.202242.112
PMCID:
PMC3505818
AbstractArticlePDF–663K
10.
HEXIM1 controls satellite cell expansion after injury to regulate skeletal muscle regeneration
Peng Hong, Kang Chen, Bihui Huang, Min Liu, Miao Cui, Inna Rozenberg, Brahim Chaqour, Xiaoyue Pan, Elisabeth R. Barton, Xian-Cheng Jiang, M.A.Q. Siddiqui
J Clin Invest. 2012 Nov 1; 122(11): 3873–3887. Published online 2012 Oct 1. doi: 10.1172/JCI62818
PMCID:
PMC3484440
AbstractArticlePDF–5.2M
11.
Cardiac Lineage Protein-1 (CLP-1) Regulates Cardiac Remodeling via Transcriptional Modulation of Diverse Hypertrophic and Fibrotic Responses and Angiotensin II-transforming Growth Factor β (TGF-β1) Signaling Axis
Eduardo Mascareno, Josephine Galatioto, Inna Rozenberg, Louis Salciccioli, Haroon Kamran, Jason M. Lazar, Fang Liu, Thierry Pedrazzini, M. A. Q. Siddiqui
J Biol Chem. 2012 Apr 13; 287(16): 13084–13093. Published online 2012 Feb 3. doi: 10.1074/jbc.M111.288944
PMCID:
PMC3339995
AbstractArticlePDF–1.8M
12.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
13.
A Systems Approach Reveals that the Myogenesis Genome Network Is Regulated by the Transcriptional Repressor RP58
Shigetoshi Yokoyama, Yoshiaki Ito, Hiroe Ueno-Kudoh, Hirohito Shimizu, Kenta Uchibe, Sonia Albini, Kazuhiko Mitsuoka, Shigeru Miyaki, Minako Kiso, Akane Nagai, Tomohiro Hikata, Tadahiro Osada, Noritsugu Fukuda, Satoshi Yamashita, Daisuke Harada, Valeria Mezzano, Masataka Kasai, Pier Lorenzo Puri, Yoshihide Hayashizaki, Haruo Okado, Megumi Hashimoto, Hiroshi Asahara
Dev Cell. Author manuscript; available in PMC 2011 Jun 7.
Published in final edited form as: Dev Cell. 2009 Dec; 17(6): 836–848. doi: 10.1016/j.devcel.2009.10.011
PMCID:
PMC3110151
AbstractArticlePDF–2.0M
14.
CLP-1 associates with MyoD and HDAC to restore skeletal muscle cell regeneration
Josephine Galatioto, Eduardo Mascareno, M. A. Q. Siddiqui
J Cell Sci. 2010 Nov 1; 123(21): 3789–3795. Published online 2010 Oct 12. doi: 10.1242/jcs.073387
PMCID:
PMC2964110
AbstractArticle
15.
MUTATION OF THE HEXIM1 GENE RESULTS IN DEFECTS DURING HEART AND VASCULAR DEVELOPMENT PARTLY THROUGH DOWNREGULATION OF VEGF
Monica M. Montano, Yong Qui Doughman, Huayun Deng, Laura Chaplin, Jianqi Yang, Nancy Wang, Qiang Zhou, Nicole L. Ward, Michiko Watanabe
Circ Res. Author manuscript; available in PMC 2010 Jul 16.
Published in final edited form as: Circ Res. 2008 Feb 29; 102(4): 415–422. Published online 2007 Dec 13. doi: 10.1161/CIRCRESAHA.107.157859
PMCID:
PMC2905161
AbstractArticlePDF–3.5M
16.
HEXIM1 modulates vascular endothelial growth factor expression and function in breast epithelial cells and mammary gland
Ndiya Ogba, Yong Qiu Doughman, Laura J. Chaplin, Yanduan Hu, Madhusudhana Gargesha, Michiko Watanabe, Monica M. Montano
Oncogene. Author manuscript; available in PMC 2010 Dec 1.
Published in final edited form as: Oncogene. 2010 Jun 24; 29(25): 3639–3649. Published online 2010 May 10. doi: 10.1038/onc.2010.110
PMCID:
PMC2892028
AbstractArticlePDF–775K
17.
Pivotal role of cardiac lineage protein-1 (CLP-1) in transcriptional elongation factor P-TEFb complex formation in cardiac hypertrophy
Jorge Espinoza-Derout, Michael Wagner, Katayoun Shahmiri, Eduardo Mascareno, Brahim Chaqour, M. A. Q. Siddiqui
Cardiovasc Res. Author manuscript; available in PMC 2009 Nov 17.
Published in final edited form as: Cardiovasc Res. 2007 Jul 1; 75(1): 129–138. Published online 2007 Mar 28. doi: 10.1016/j.cardiores.2007.03.019
PMCID:
PMC2778048
AbstractArticlePDF–3.0M
18.
Positive Transcription Elongation Factor b (P-TEFb) Activity in Compensatory Myocardial Hypertrophy is Regulated by Cardiac Lineage Protein-1
Jorge Espinoza-Derout, Michael Wagner, Louis Salciccioli, Jason M. Lazar, Sikha Bhaduri, Eduardo Mascareno, Brahim Chaqour, M.A.Q. Siddiqui
Circ Res. Author manuscript; available in PMC 2010 Jun 19.
Published in final edited form as: Circ Res. 2009 Jun 19; 104(12): 1347–1354. Published online 2009 May 14. doi: 10.1161/CIRCRESAHA.108.191726
PMCID:
PMC2774227
AbstractArticlePDF–3.4M
19.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
20.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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