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Items: 1 to 20 of 46

1.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
2.
A genetic toolkit for studying transposon control in the Drosophila melanogaster ovary
Mostafa F ElMaghraby, Laszlo Tirian, Kirsten-André Senti, Katharina Meixner, Julius Brennecke
Genetics. 2022 Jan; 220(1): iyab179. Published online 2021 Oct 30. doi: 10.1093/genetics/iyab179
PMCID:
PMC8733420
AbstractArticlePDF–3.3M
3.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
4.
piRNA-independent transposon silencing by the Drosophila THO complex
Gen Zhang, Tianxiong Yu, Swapnil S. Parhad, Samantha Ho, Zhiping Weng, William E. Theurkauf
Dev Cell. Author manuscript; available in PMC 2022 Sep 27.
Published in final edited form as: Dev Cell. 2021 Sep 27; 56(18): 2623–2635.e5. Published online 2021 Sep 20. doi: 10.1016/j.devcel.2021.08.021
PMCID:
PMC8567991
AbstractArticlePDF–2.0M
5.
Roles for RNA export factor, Nxt1, in ensuring muscle integrity and normal RNA expression in Drosophila
Kevin van der Graaf, Katia Jindrich, Robert Mitchell, Helen White-Cooper
G3 (Bethesda) 2021 Jan; 11(1): jkaa046. Published online 2020 Dec 24. doi: 10.1093/g3journal/jkaa046
PMCID:
PMC8022728
AbstractArticlePDF–3.3M
6.
Diverse Defenses: A Perspective Comparing Dipteran Piwi-piRNA Pathways
Stephanie Gamez, Satyam Srivastav, Omar S. Akbari, Nelson C. Lau
Cells. 2020 Oct; 9(10): 2180. Published online 2020 Sep 27. doi: 10.3390/cells9102180
PMCID:
PMC7601171
AbstractArticlePDF–2.4M
7.
Nuclear Ccr4-Not mediates the degradation of telomeric and transposon transcripts at chromatin in the Drosophila germline
Maria Kordyukova, Olesya Sokolova, Valeriya Morgunova, Sergei Ryazansky, Natalia Akulenko, Sergey Glukhov, Alla Kalmykova
Nucleic Acids Res. 2020 Jan 10; 48(1): 141–156. Published online 2019 Nov 14. doi: 10.1093/nar/gkz1072
PMCID:
PMC7145718
AbstractArticlePDF–3.8M
8.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
9.
Satellite DNA-containing gigantic introns in a unique gene expression program during Drosophila spermatogenesis
Jaclyn M. Fingerhut, Jessica V. Moran, Yukiko M. Yamashita
PLoS Genet. 2019 May; 15(5): e1008028. Published online 2019 May 9. doi: 10.1371/journal.pgen.1008028
PMCID:
PMC6508621
AbstractArticlePDF–5.0M
10.
Zinc Finger Protein CG9890 - New Component of ENY2-Containing Complexes of Drosophila
N. A. Fursova, J. V. Nikolenko, N. V. Soshnikova, M. Y. Mazina, N. E. Vorobyova, A. N. Krasnov
Acta Naturae. 2018 Oct-Dec; 10(4): 110–114.
PMCID:
PMC6351030
AbstractArticlePDF–1.2M
11.
Co-dependent Assembly of Drosophila piRNA Precursor Complexes and piRNA Cluster Heterochromatin
Gen Zhang, Shikui Tu, Tianxiong Yu, Xiao-Ou Zhang, Swapnil S. Parhad, Zhiping Weng, William E. Theurkauf
Cell Rep. Author manuscript; available in PMC 2018 Nov 14.
Published in final edited form as: Cell Rep. 2018 Sep 25; 24(13): 3413–3422.e4. doi: 10.1016/j.celrep.2018.08.081
PMCID:
PMC6235161
AbstractArticlePDF–1.5M
12.
A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs
Chuan Huang, Dongming Liang, Deirdre C. Tatomer, Jeremy E. Wilusz
Genes Dev. 2018 May 1; 32(9-10): 639–644. doi: 10.1101/gad.314856.118
PMCID:
PMC6004072
AbstractArticlePDF–678K
13.
piRNA Biogenesis in Drosophila Melanogaster
Xiawei Huang, Katalin Fejes Tóth, Alexei A. Aravin
Trends Genet. Author manuscript; available in PMC 2018 Nov 1.
Published in final edited form as: Trends Genet. 2017 Nov; 33(11): 882–894. Published online 2017 Sep 27. doi: 10.1016/j.tig.2017.09.002
PMCID:
PMC5773129
AbstractArticlePDF–1.1M
14.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
15.
Zucchini-dependent piRNA processing is triggered by recruitment to the cytoplasmic processing machinery
Alicia K. Rogers, Kathy Situ, Edward M. Perkins, Katalin Fejes Toth
Genes Dev. 2017 Sep 15; 31(18): 1858–1869. doi: 10.1101/gad.303214.117
PMCID:
PMC5695087
AbstractArticlePDF–5.1M
16.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
17.
Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells
Artem A. Ilyin, Sergei S. Ryazansky, Semen A. Doronin, Oxana M. Olenkina, Elena A. Mikhaleva, Evgeny Y. Yakushev, Yuri A. Abramov, Stepan N. Belyakin, Anton V. Ivankin, Alexey V. Pindyurin, Vladimir A. Gvozdev, Mikhail S. Klenov, Yuri Y. Shevelyov
Nucleic Acids Res. 2017 Jul 27; 45(13): 7666–7680. Published online 2017 May 2. doi: 10.1093/nar/gkx355
PMCID:
PMC5570135
AbstractArticlePDF–2.5M
18.
ORC interacts with THSC/TREX-2 and its subunits promote Nxf1 association with mRNP and mRNA export in Drosophila
Daria Kopytova, Varvara Popova, Maria Kurshakova, Yulii Shidlovskii, Elena Nabirochkina, Alexander Brechalov, Georgii Georgiev, Sofia Georgieva
Nucleic Acids Res. 2016 Jun 2; 44(10): 4920–4933. Published online 2016 Mar 25. doi: 10.1093/nar/gkw192
PMCID:
PMC4889942
AbstractArticlePDF–6.1M
19.
mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster
Gildas Lepennetier, Francesco Catania
G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231
PMCID:
PMC4889658
AbstractArticlePDF–1.5M
20.
Splicing-independent loading of TREX on nascent RNA is required for efficient expression of dual-strand piRNA clusters in Drosophila
Junho K. Hur, Yicheng Luo, Sungjin Moon, Maria Ninova, Georgi K. Marinov, Yun D. Chung, Alexei A. Aravin
Genes Dev. 2016 Apr 1; 30(7): 840–855. doi: 10.1101/gad.276030.115
PMCID:
PMC4826399
AbstractArticlePDF–1.6M

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