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Items: 1 to 20 of 33

1.
Neuronal Wiring Receptors Dprs and DIPs Are GPI Anchored and This Modification Contributes to Their Cell Surface Organization
Meike Lobb-Rabe, Wioletta I. Nawrocka, Ruiling Zhang, James Ashley, Robert A. Carrillo, Engin Özkan
eNeuro. 2024 Feb; 11(2): ENEURO.0184-23.2023. Prepublished online 2024 Jan 17. Published online 2024 Feb 9. doi: 10.1523/ENEURO.0184-23.2023
PMCID:
PMC10863630
AbstractArticlePDF–5.0M
2.
Selection and geography shape male reproductive tract transcriptomes in Drosophila melanogaster
Julie M Cridland, Colin E Contino, David J Begun
Genetics. 2023 May; 224(1): iyad034. Published online 2023 Mar 3. doi: 10.1093/genetics/iyad034
PMCID:
PMC10474930
AbstractArticlePDF–816K
3.
Systematic expression profiling of Dpr and DIP genes reveals cell surface codes in Drosophila larval motor and sensory neurons
Yupu Wang, Meike Lobb-Rabe, James Ashley, Purujit Chatterjee, Veera Anand, Hugo J. Bellen, Oguz Kanca, Robert A. Carrillo
Development. 2022 May 15; 149(10): dev200355. Published online 2022 May 19. doi: 10.1242/dev.200355
PMCID:
PMC9188756
AbstractArticle
4.
Investigation of Drosophila fruitless neurons that express Dpr/DIP cell adhesion molecules
Savannah G Brovero, Julia C Fortier, Hongru Hu, Pamela C Lovejoy, Nicole R Newell, Colleen M Palmateer, Ruei-Ying Tzeng, Pei-Tseng Lee, Kai Zinn, Michelle N Arbeitman
eLife. 2021; 10: e63101. Published online 2021 Feb 22. doi: 10.7554/eLife.63101
PMCID:
PMC7972454
AbstractArticlePDF–17M
5.
DIP/Dpr interactions and the evolutionary design of specificity in protein families
Alina P. Sergeeva, Phinikoula S. Katsamba, Filip Cosmanescu, Joshua J. Brewer, Goran Ahlsen, Seetha Mannepalli, Lawrence Shapiro, Barry Honig
Nat Commun. 2020; 11: 2125. Published online 2020 May 1. doi: 10.1038/s41467-020-15981-8
PMCID:
PMC7195491
AbstractArticlePDF–3.6M
6.
Defective Proboscis Extension Response (DPR), a Member of the Ig Superfamily Required for the Gustatory Response to Salt
Makoto Nakamura, David Baldwin, Susannah Hannaford, John Palka, Craig Montell
J Neurosci. 2002 May 1; 22(9): 3463–3472. doi: 10.1523/JNEUROSCI.22-09-03463.2002
PMCID:
PMC6758379
AbstractArticlePDF–755K
7.
Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence
Shouqiang Cheng, Yeonwoo Park, Justyna D. Kurleto, Mili Jeon, Kai Zinn, Joseph W. Thornton, Engin Özkan
Proc Natl Acad Sci U S A. 2019 May 14; 116(20): 9837–9842. Published online 2019 May 1. doi: 10.1073/pnas.1818631116
PMCID:
PMC6525511
AbstractArticlePDF–1.3M
8.
Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila
Hagar Meltzer, Efrat Marom, Idan Alyagor, Oded Mayseless, Victoria Berkun, Netta Segal-Gilboa, Tamar Unger, David Luginbuhl, Oren Schuldiner
Nat Commun. 2019; 10: 2113. Published online 2019 May 8. doi: 10.1038/s41467-019-10140-0
PMCID:
PMC6506539
AbstractArticlePDF–6.5M
9.
Nuclear Transcriptomes of the Seven Neuronal Cell Types That Constitute the Drosophila Mushroom Bodies
Meng-Fu Maxwell Shih, Fred Pejman Davis, Gilbert Lee Henry, Josh Dubnau
G3 (Bethesda) 2019 Jan; 9(1): 81–94. Published online 2018 Nov 5. doi: 10.1534/g3.118.200726
PMCID:
PMC6325895
AbstractArticlePDF–2.0M
10.
Neuron sub-type specific expression, interaction affinities, and specificity determinants of DIP/Dpr cell recognition proteins
Filip Cosmanescu, Phinikoula S. Katsamba, Alina P. Sergeeva, Goran Ahlsen, Saurabh D. Patel, Joshua J. Brewer, Liming Tan, Shuwa Xu, Qi Xiao, Sonal Nagarkar-Jaiswal, Aljoscha Nern, Hugo Bellen, S. Lawrence Zipursky, Barry Honig, Lawrence Shapiro
Neuron. Author manuscript; available in PMC 2019 Dec 19.
Published in final edited form as: Neuron. 2018 Dec 19; 100(6): 1385–1400.e6. Published online 2018 Nov 19. doi: 10.1016/j.neuron.2018.10.046
PMCID:
PMC6309224
AbstractArticlePDF–3.3M
11.
Combinations of DIPs and Dprs control organization of olfactory receptor neuron terminals in Drosophila
Scott Barish, Sarah Nuss, Ilya Strunilin, Suyang Bao, Sayan Mukherjee, Corbin D. Jones, Pelin C. Volkan
PLoS Genet. 2018 Aug; 14(8): e1007560. Published online 2018 Aug 13. doi: 10.1371/journal.pgen.1007560
PMCID:
PMC6107282
AbstractArticlePDF–37M
12.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
13.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
14.
Neural Immunoglobulin Superfamily Interaction Networks
Kai Zinn, Engin Özkan
Curr Opin Neurobiol. Author manuscript; available in PMC 2018 Aug 1.
Published in final edited form as: Curr Opin Neurobiol. 2017 Aug; 45: 99–105. Published online 2017 May 27. doi: 10.1016/j.conb.2017.05.010
PMCID:
PMC5554755
AbstractArticlePDF–857K
15.
Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila
Liming Tan, Kelvin Xi Zhang, Matthew Y. Pecot, Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Shin-ya Takemura, Jason M. McEwen, Aljoscha Nern, Shuwa Xu, Wael Tadros, Zhenqing Chen, Kai Zinn, Hugo J. Bellen, Marta Morey, S. Lawrence Zipursky
Cell. Author manuscript; available in PMC 2016 Jun 17.
Published in final edited form as: Cell. 2015 Dec 17; 163(7): 1756–1769. doi: 10.1016/j.cell.2015.11.021
PMCID:
PMC4804707
AbstractArticlePDF–3.5M
16.
Control of synaptic connectivity by a network of Drosophila IgSF cell surface proteins
Robert A. Carrillo, Engin Özkan, Kaushiki P. Menon, Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Mili Jeon, Michael E. Birnbaum, Hugo J. Bellen, K. Christopher Garcia, Kai Zinn
Cell. Author manuscript; available in PMC 2016 Dec 17.
Published in final edited form as: Cell. 2015 Dec 17; 163(7): 1770–1782. doi: 10.1016/j.cell.2015.11.022
PMCID:
PMC4720259
AbstractArticlePDF–2.7M
17.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
18.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
19.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
20.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K

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