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Select item 101950241.

Enhanced stimulation of chromosomal translocations and sister chromatid exchanges by either HO-induced double-strand breaks or ionizing radiation in Saccharomyces cerevisiae yku70 mutants

Michael Fasullo, Courtney St. Amour, Li Zeng

Mutat Res. Author manuscript; available in PMC 2023 May 18.

Published in final edited form as: Mutat Res. 2005 Oct 15; 578(1-2): 158–169. Published online 2005 Jun 28. doi: 10.1016/j.mrfmmm.2005.05.003

PMCID:: PMC10195024

Abstract Article PDF–543K

Select item 92098112.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 78061313.

Ash1 and Tup1 dependent repression of the Saccharomyces cerevisiae HO promoter requires activator-dependent nucleosome eviction

Emily J. Parnell, Timothy J. Parnell, Chao Yan, Lu Bai, David J. Stillman

PLoS Genet. 2020 Dec; 16(12): e1009133. Published online 2020 Dec 31. doi: 10.1371/journal.pgen.1009133

PMCID:: PMC7806131

Abstract Article PDF–4.3M

Select item 76724224.

Efficient DNA double-strand break formation at single or multiple defined sites in the Saccharomyces cerevisiae genome

Robert Gnügge, Lorraine S Symington

Nucleic Acids Res. 2020 Nov 18; 48(20): e115. Published online 2020 Oct 14. doi: 10.1093/nar/gkaa833

PMCID:: PMC7672422

Abstract Article PDF–1.2M

Select item 76417405.

FACT and Ash1 promote long-range and bidirectional nucleosome eviction at the HO promoter

Yaxin Yu, Robert M Yarrington, David J Stillman

Nucleic Acids Res. 2020 Nov 4; 48(19): 10877–10889. Published online 2020 Oct 3. doi: 10.1093/nar/gkaa819

PMCID:: PMC7641740

Abstract Article PDF–5.6M

Select item 75344316.

Recombinational Repair of Nuclease-Generated Mitotic Double-Strand Breaks with Different End Structures in Yeast

Dionna Gamble, Samantha Shaltz, Sue Jinks-Robertson

G3 (Bethesda) 2020 Oct; 10(10): 3821–3829. Published online 2020 Aug 21. doi: 10.1534/g3.120.401603

PMCID:: PMC7534431

Abstract Article PDF–1.5M

Select item 72828137.

The yeast mating-type switching endonuclease HO is a domesticated member of an unorthodox homing genetic element family

Aisling Y Coughlan, Lisa Lombardi, Stephanie Braun-Galleani, Alexandre AR Martos, Virginie Galeote, Frédéric Bigey, Sylvie Dequin, Kevin P Byrne, Kenneth H Wolfe

eLife. 2020; 9: e55336. Published online 2020 Apr 27. doi: 10.7554/eLife.55336

PMCID:: PMC7282813

Abstract Article PDF–1.0M

Select item 72689938.

A Role for Mediator Core in Limiting Coactivator Recruitment in Saccharomyces cerevisiae

Robert M. Yarrington, Yaxin Yu, Chao Yan, Lu Bai, David J. Stillman

Genetics. 2020 Jun; 215(2): 407–420. Published online 2020 Apr 23. doi: 10.1534/genetics.120.303254

PMCID:: PMC7268993

Abstract Article PDF–1.9M

Select item 67074529.

Multiple Negative Regulators Restrict Recruitment of the SWI/SNF Chromatin Remodeler to the HO Promoter in Saccharomyces cerevisiae

Emily J. Parnell, David J. Stillman

Genetics. 2019 Aug; 212(4): 1181–1204. Published online 2019 Jun 5. doi: 10.1534/genetics.119.302359

PMCID:: PMC6707452

Abstract Article PDF–2.3M

Select item 645064310.

The mRNA export adaptor Yra1 contributes to DNA double-strand break repair through its C-box domain

Valentina Infantino, Evelina Tutucci, Noël Yeh Martin, Audrey Zihlmann, Varinia Garcia-Molinero, Géraldine Silvano, Benoit Palancade, Françoise Stutz

PLoS One. 2019; 14(4): e0206336. Published online 2019 Apr 5. doi: 10.1371/journal.pone.0206336

PMCID:: PMC6450643

Abstract Article PDF–1.9M

Select item 629136611.

The cellular economy of the Saccharomyces cerevisiae zinc proteome

Yirong Wang, Erin Weisenhorn, Colin MacDiarmid, Claudia Andreini, Michael Bucci, Janet Taggart, Lucia Banci, Jason Russell, Joshua J. Coon, David J. Eide

Metallomics. Author manuscript; available in PMC 2019 Dec 12.

Published in final edited form as: Metallomics. 2018 Dec 12; 10(12): 1755–1776. doi: 10.1039/c8mt00269j

PMCID:: PMC6291366

Abstract Article PDF–3.0M

Select item 622257812.

HO Endonuclease-Initiated Recombination in Yeast Meiosis Fails To Promote Homologous Centromere Pairing and Is Not Constrained To Utilize the Dmc1 Recombinase

Lina Yisehak, Amy J. MacQueen

G3 (Bethesda) 2018 Nov; 8(11): 3637–3659. Published online 2018 Sep 25. doi: 10.1534/g3.118.200641

PMCID:: PMC6222578

Abstract Article PDF–2.1M

Select item 576535913.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 564803214.

Architecture and dynamics of overlapped RNA regulatory networks

Christopher P. Lapointe, Melanie A. Preston, Daniel Wilinski, Harriet A.J. Saunders, Zachary T. Campbell, Marvin Wickens

RNA. 2017 Nov; 23(11): 1636–1647. doi: 10.1261/rna.062687.117

PMCID:: PMC5648032

Abstract Article PDF–6.6M

Select item 541307215.

Microhomology-mediated end joining induces hypermutagenesis at breakpoint junctions

Supriya Sinha, Fuyang Li, Diana Villarreal, Jae Hoon Shim, Suhyeon Yoon, Kyungjae Myung, Eun Yong Shim, Sang Eun Lee

PLoS Genet. 2017 Apr; 13(4): e1006714. Published online 2017 Apr 18. doi: 10.1371/journal.pgen.1006714

PMCID:: PMC5413072

Abstract Article PDF–2.0M

Select item 520434816.

A novel translational control mechanism involving RNA structures within coding sequences

Jennifer Jungfleisch, Danny D. Nedialkova, Ivan Dotu, Katherine E. Sloan, Neus Martinez-Bosch, Lukas Brüning, Emanuele Raineri, Pilar Navarro, Markus T. Bohnsack, Sebastian A. Leidel, Juana Díez

Genome Res. 2017 Jan; 27(1): 95–106. doi: 10.1101/gr.209015.116

Correction in:: Genome Res. 2017 Apr; 27(4): 663.

PMCID:: PMC5204348

Abstract Article PDF–1.3M

Select item 500323617.

Disruption of promoter memory by synthesis of a long noncoding RNA

Yaxin Yu, Robert M. Yarrington, Edward B. Chuong, Nels C. Elde, David J. Stillman

Proc Natl Acad Sci U S A. 2016 Aug 23; 113(34): 9575–9580. Published online 2016 Aug 9. doi: 10.1073/pnas.1601793113

PMCID:: PMC5003236

Abstract Article PDF–863K

Select item 461964718.

Efficient Mating-Type Switching in Candida glabrata Induces Cell Death

Stéphanie Boisnard, Youfang Zhou Li, Sylvie Arnaise, Gregory Sequeira, Xavier Raffoux, Adela Enache-Angoulvant, Monique Bolotin-Fukuhara, Cécile Fairhead

PLoS One. 2015; 10(10): e0140990. Published online 2015 Oct 22. doi: 10.1371/journal.pone.0140990

PMCID:: PMC4619647

Abstract Article PDF–2.6M

Select item 461603919.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518