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Select item 111168121.

Mitochondria–ER–PM contacts regulate mitochondrial division and PI(4)P distribution

Jason C. Casler, Clare S. Harper, Antoineen J. White, Heidi L. Anderson, Laura L. Lackner

J Cell Biol. 2024 Sep 2; 223(9): e202308144. Published online 2024 May 23. doi: 10.1083/jcb.202308144

PMCID:: PMC11116812

Abstract Article PDF–9.2M

Select item 108724772.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107001383.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 92098114.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 76724335.

Altered rRNA processing disrupts nuclear RNA homeostasis via competition for the poly(A)-binding protein Nab2

Lisbeth-Carolina Aguilar, Biplab Paul, Taylor Reiter, Louis Gendron, Arvind Arul Nambi Rajan, Rachel Montpetit, Christian Trahan, Sebastian Pechmann, Marlene Oeffinger, Ben Montpetit

Nucleic Acids Res. 2020 Nov 18; 48(20): 11675–11694. Published online 2020 Nov 2. doi: 10.1093/nar/gkaa964

PMCID:: PMC7672433

Abstract Article PDF–6.0M

Select item 76508136.

Two- and Three-Dimensional Tracking of MFA2 mRNA Molecules in Mating Yeast

Polina Geva, Konstantin Komoshvili, Stella Liberman-Aronov

Cells. 2020 Oct; 9(10): 2151. Published online 2020 Sep 23. doi: 10.3390/cells9102151

PMCID:: PMC7650813

Abstract Article PDF–3.5M

Select item 76417407.

FACT and Ash1 promote long-range and bidirectional nucleosome eviction at the HO promoter

Yaxin Yu, Robert M Yarrington, David J Stillman

Nucleic Acids Res. 2020 Nov 4; 48(19): 10877–10889. Published online 2020 Oct 3. doi: 10.1093/nar/gkaa819

PMCID:: PMC7641740

Abstract Article PDF–5.6M

Select item 59225288.

Global analysis of genetic circuitry and adaptive mechanisms enabling resistance to the azole antifungal drugs

Harley O’Connor Mount, Nicole M. Revie, Robert T. Todd, Kaitlin Anstett, Cathy Collins, Michael Costanzo, Charles Boone, Nicole Robbins, Anna Selmecki, Leah E. Cowen

PLoS Genet. 2018 Apr; 14(4): e1007319. Published online 2018 Apr 27. doi: 10.1371/journal.pgen.1007319

PMCID:: PMC5922528

Abstract Article PDF–7.1M

Select item 57653599.

Genome-Wide Mapping of Decay Factor–mRNA Interactions in Yeast Identifies Nutrient-Responsive Transcripts as Targets of the Deadenylase Ccr4

Jason E. Miller, Liye Zhang, Haoyang Jiang, Yunfei Li, B. Franklin Pugh, Joseph C. Reese

G3 (Bethesda) 2018 Jan; 8(1): 315–330. Published online 2017 Nov 20. doi: 10.1534/g3.117.300415

PMCID:: PMC5765359

Abstract Article PDF–2.2M

Select item 573230210.

She1 affects dynein through direct interactions with the microtubule and the dynein microtubule-binding domain

Kari H. Ecklund, Tatsuya Morisaki, Lindsay G. Lammers, Matthew G. Marzo, Timothy J. Stasevich, Steven M. Markus

Nat Commun. 2017; 8: 2151. Published online 2017 Dec 15. doi: 10.1038/s41467-017-02004-2

PMCID:: PMC5732302

Abstract Article PDF–3.6M

Select item 566188511.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 514238012.

Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae

Dimitris Kyriakou, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, Vasilis J. Promponas, Antonis Kirmizis

BMC Biol. 2016; 14: 106. Published online 2016 Dec 7. doi: 10.1186/s12915-016-0325-7

PMCID:: PMC5142380

Abstract Article PDF–1.2M

Select item 506299413.

Tma108, a putative M1 aminopeptidase, is a specific nascent chain-associated protein in Saccharomyces cerevisiae

Thierry Delaveau, Dimitri Davoine, Ariane Jolly, Antoine Vallot, Jérôme O. Rouvière, Athenaïs Gerber, Sandra Brochet, Marion Plessis, Roxane Roquigny, Jawad Merhej, Thibaut Leger, Camille Garcia, Gaëlle Lelandais, Elodie Laine, Benoit Palancade, Frédéric Devaux, Mathilde Garcia

Nucleic Acids Res. 2016 Oct 14; 44(18): 8826–8841. Published online 2016 Aug 31. doi: 10.1093/nar/gkw732

PMCID:: PMC5062994

Abstract Article PDF–3.3M

Select item 495692114.

RNA asymmetric distribution and daughter/mother differentiation in yeast

Xavier Darzacq, Erin Powrie, Wei Gu, Robert H Singer, Daniel Zenklusen

Curr Opin Microbiol. Author manuscript; available in PMC 2016 Jul 22.

Published in final edited form as: Curr Opin Microbiol. 2003 Dec; 6(6): 614–620. doi: 10.1016/j.mib.2003.10.005

PMCID:: PMC4956921

Abstract Article PDF–706K

Select item 461603915.

Integrated multi-omics analyses reveal the pleiotropic nature of the control of gene expression by Puf3p

Christopher J. Kershaw, Joseph L. Costello, David Talavera, William Rowe, Lydia M. Castelli, Paul F. G. Sims, Christopher M. Grant, Mark P. Ashe, Simon J. Hubbard, Graham D. Pavitt

Sci Rep. 2015; 5: 15518. Published online 2015 Oct 23. doi: 10.1038/srep15518

PMCID:: PMC4616039

Abstract Article PDF–2.2M

Select item 461583316.

A single molecule approach to mRNA transport by a class V myosin

Thomas E Sladewski, Kathleen M Trybus

RNA Biol. 2014 Aug; 11(8): 986–991. Published online 2014 Oct 31. doi: 10.4161/rna.29947

PMCID:: PMC4615833

Abstract Article PDF–563K

Select item 461564217.

ASH1 mRNP-core factors form stable complexes in absence of cargo RNA at physiological conditions

Franziska T Edelmann, Annika Niedner, Dierk Niessing

RNA Biol. 2015 Mar; 12(3): 233–237. Published online 2015 Mar 31. doi: 10.1080/15476286.2015.1017217

PMCID:: PMC4615642

Abstract Article PDF–293K

Select item 405396418.

Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

Mallory A Freeberg, Ting Han, James J Moresco, Andy Kong, Yu-Cheng Yang, Zhi John Lu, John R Yates, John K Kim

Genome Biol. 2013; 14(2): R13. Published online 2013 Feb 14. doi: 10.1186/gb-2013-14-2-r13

PMCID:: PMC4053964

Abstract Article PDF–1.7M

Select item 405342419.

Unidirectional P-Body Transport during the Yeast Cell Cycle

Cecilia Garmendia-Torres, Alexander Skupin, Sean A. Michael, Pekka Ruusuvuori, Nathan J. Kuwada, Didier Falconnet, Gregory A. Cary, Carl Hansen, Paul A. Wiggins, Aimée M. Dudley

PLoS One. 2014; 9(6): e99428. Published online 2014 Jun 11. doi: 10.1371/journal.pone.0099428

PMCID:: PMC4053424

Abstract Article PDF–2.5M

Select item 387143220.

In vitro reconstitution of an mRNA-transport complex reveals mechanisms of assembly and motor activation

Roland G. Heym, Dennis Zimmermann, Franziska T. Edelmann, Lars Israel, Zeynep Ökten, David R. Kovar, Dierk Niessing

J Cell Biol. 2013 Dec 23; 203(6): 971–984. doi: 10.1083/jcb.201302095

PMCID:: PMC3871432

Abstract Article PDF–2.2M

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