PMC Links for GEO Profiles (Select 48072895) - PMC

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 86938605.

Multilayered regulation of autophagy by the Atg1 kinase orchestrates spatial and temporal control of autophagosome formation

Anne Schreiber, Ben C. Collins, Colin Davis, Radoslav I. Enchev, Angie Sedra, Rocco D’Antuono, Ruedi Aebersold, Matthias Peter

Mol Cell. 2021 Dec 16; 81(24): 5066–5081.e10. doi: 10.1016/j.molcel.2021.10.024

PMCID:: PMC8693860

Abstract Article

Select item 86649006.

Spatial control of avidity regulates initiation and progression of selective autophagy

David M. Hollenstein, Mariya Licheva, Nicole Konradi, David Schweida, Hector Mancilla, Muriel Mari, Fulvio Reggiori, Claudine Kraft

Nat Commun. 2021; 12: 7194. Published online 2021 Dec 10. doi: 10.1038/s41467-021-27420-3

PMCID:: PMC8664900

Abstract Article PDF–3.6M

Select item 77515037.

Atg11 is required for initiation of glucose starvation-induced autophagy

Weijing Yao, Yixing Li, Liming Wu, Choufei Wu, Yi Zhang, Jing Liu, Zhiyong He, Xiaoyong Wu, Chenjun Lu, Liefeng Wang, Huiming Zhong, Zhi Hong, Shiming Xu, Wei Liu, Cong Yi

Autophagy. 2020; 16(12): 2206–2218. Published online 2020 Feb 3. doi: 10.1080/15548627.2020.1719724

PMCID:: PMC7751503

Abstract Article PDF–4.5M

Select item 77214758.

A Selective Autophagy Pathway for Phase-Separated Endocytic Protein Deposits

Florian Wilfling, Chia-Wei Lee, Philipp S. Erdmann, Yumei Zheng, Dawafuti Sherpa, Stefan Jentsch, Boris Pfander, Brenda A. Schulman, Wolfgang Baumeister

Mol Cell. 2020 Dec 3; 80(5): 764–778.e7. doi: 10.1016/j.molcel.2020.10.030

PMCID:: PMC7721475

Abstract Article

Select item 75490299.

Potassium starvation induces autophagy in yeast

Nambirajan Rangarajan, Ishani Kapoor, Shuang Li, Peter Drossopoulos, Kristen K. White, Victoria J. Madden, Henrik G. Dohlman

J Biol Chem. 2020 Oct 9; 295(41): 14189–14202. Published online 2020 Aug 11. doi: 10.1074/jbc.RA120.014687

PMCID:: PMC7549029

Abstract Article PDF–3.2M

Select item 727574410.

β-Oxidation and autophagy are critical energy providers during acute glucose depletion in Saccharomyces cerevisiae

Carmen A. Weber, Karthik Sekar, Jeffrey H. Tang, Philipp Warmer, Uwe Sauer, Karsten Weis

Proc Natl Acad Sci U S A. 2020 Jun 2; 117(22): 12239–12248. Published online 2020 May 19. doi: 10.1073/pnas.1913370117

PMCID:: PMC7275744

Abstract Article PDF–2.1M

Select item 713822211.

DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae

Ying Zhang, Yubin Xie, Wenzhong Liu, Wankun Deng, Di Peng, Chenwei Wang, Haodong Xu, Chen Ruan, Yongjie Deng, Yaping Guo, Chenjun Lu, Cong Yi, Jian Ren, Yu Xue

Autophagy. 2020; 16(4): 626–640. Published online 2019 Jun 20. doi: 10.1080/15548627.2019.1632622

PMCID:: PMC7138222

Abstract Article PDF–8.0M

Select item 695432112.

Autophagy regulator Atg9 is degraded by the proteasome

Guohui Hu, Lizette Rios, Zhengwei Yan, Angela M. Jasper, Dezzarae Luera, Shiwen Luo, Hai Rao

Biochem Biophys Res Commun. Author manuscript; available in PMC 2021 Jan 29.

Published in final edited form as: Biochem Biophys Res Commun. 2020 Jan 29; 522(1): 254–258. Published online 2019 Nov 21. doi: 10.1016/j.bbrc.2019.11.089

PMCID:: PMC6954321

Abstract Article PDF–336K

Select item 695134513.

Psp2, a novel regulator of autophagy that promotes autophagy-related protein translation

Zhangyuan Yin, Xu Liu, Aileen Ariosa, Haina Huang, Meiyan Jin, Katrin Karbstein, Daniel J. Klionsky

Cell Res. 2019 Dec; 29(12): 994–1008. Published online 2019 Oct 30. doi: 10.1038/s41422-019-0246-4

PMCID:: PMC6951345

Abstract Article PDF–2.3M

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Extension of Cellular Lifespan by Methionine Restriction Involves Alterations in Central Carbon Metabolism and Is Mitophagy-Dependent

Jason D. Plummer, Jay E. Johnson

Front Cell Dev Biol. 2019; 7: 301. Published online 2019 Nov 28. doi: 10.3389/fcell.2019.00301

PMCID:: PMC6892753

Abstract Article PDF–2.7M

Select item 677943615.

Systematic analysis of F-box proteins reveals a new branch of the yeast mating pathway

Nambirajan Rangarajan, Claire L. Gordy, Lauren Askew, Samantha M. Bevill, Timothy C. Elston, Beverly Errede, Jillian H. Hurst, Joshua B. Kelley, Joshua B. Sheetz, Sara Kimiko Suzuki, Natalie H. Valentin, Everett Young, Henrik G. Dohlman

J Biol Chem. 2019 Oct 4; 294(40): 14717–14731. Published online 2019 Aug 9. doi: 10.1074/jbc.RA119.010063

PMCID:: PMC6779436

Abstract Article PDF–1.5M

Select item 640524316.

Two distinct mechanisms target the autophagy-related E3 complex to the pre-autophagosomal structure

Kumi Harada, Tetsuya Kotani, Hiromi Kirisako, Machiko Sakoh-Nakatogawa, Yu Oikawa, Yayoi Kimura, Hisashi Hirano, Hayashi Yamamoto, Yoshinori Ohsumi, Hitoshi Nakatogawa

eLife. 2019; 8: e43088. Published online 2019 Feb 27. doi: 10.7554/eLife.43088

PMCID:: PMC6405243

Abstract Article PDF–2.8M

Select item 635113517.

A nuclear membrane-derived structure associated with Atg8 is involved in the sequestration of selective cargo, the Cvt complex, during autophagosome formation in yeast

Misuzu Baba, Sachihiko Tomonaga, Masato Suzuki, Maeda Gen, Eigo Takeda, Akira Matsuura, Yoshiaki Kamada, Norio Baba

Autophagy. 2019; 15(3): 423–437. Published online 2018 Oct 11. doi: 10.1080/15548627.2018.1525475

PMCID:: PMC6351135

Abstract Article PDF–3.3M

Select item 607000218.

The exoribonuclease Xrn1 is a post-transcriptional negative regulator of autophagy

Elizabeth Delorme-Axford, Emma Abernathy, Nicholas J. Lennemann, Amélie Bernard, Aileen Ariosa, Carolyn B. Coyne, Karla Kirkegaard, Daniel J. Klionsky

Autophagy. 2018; 14(5): 898–912. Published online 2018 Mar 21. doi: 10.1080/15548627.2018.1441648