PMC Links for GEO Profiles (Select 49307176) - PMC

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Items: 19

Select item 63668611.

Affinity-based capture and identification of protein effectors of the growth regulator ppGpp

Boyuan Wang, Peng Dai, David Ding, Amanda Del Rosario, Robert A. Grant, Bradley L. Pentelute, Michael T. Laub

Nat Chem Biol. Author manuscript; available in PMC 2019 Jun 17.

Published in final edited form as: Nat Chem Biol. 2019 Feb; 15(2): 141–150. Published online 2018 Dec 17. doi: 10.1038/s41589-018-0183-4

Correction in:: Nat Chem Biol. 2019 May 10

PMCID:: PMC6366861

Abstract Article PDF–2.2M

Select item 51013522.

Identification of YbeY-Protein Interactions Involved in 16S rRNA Maturation and Stress Regulation in Escherichia coli

Maarten Vercruysse, Caroline Köhrer, Yang Shen, Sandra Proulx, Anubrata Ghosal, Bryan W. Davies, Uttam L. RajBhandary, Graham C. Walker

mBio. 2016 Nov-Dec; 7(6): e01785-16. Published online 2016 Nov 8. doi: 10.1128/mBio.01785-16

PMCID:: PMC5101352

Abstract Article PDF–1.9M

Select item 42459603.

Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly

Xiaoxiao Zhang, Kaige Yan, Yixiao Zhang, Ningning Li, Chengying Ma, Zhifei Li, Yanqing Zhang, Boya Feng, Jing Liu, Yadong Sun, Yanji Xu, Jianlin Lei, Ning Gao

Nucleic Acids Res. 2014 Dec 1; 42(21): 13430–13439. Published online 2014 Nov 11. doi: 10.1093/nar/gku1135

PMCID:: PMC4245960

Abstract Article PDF–678K

Select item 41238554.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 40611325.

Phenotypic investigations of the depletion of EngA in Escherichia coli are consistent with a role in ribosome biogenesis

Amrita Bharat, Eric D. Brown

FEMS Microbiol Lett. Author manuscript; available in PMC 2015 Apr 1.

Published in final edited form as: FEMS Microbiol Lett. 2014 Apr; 353(1): 26–32. doi: 10.1111/1574-6968.12403

PMCID:: PMC4061132

Abstract Article PDF–879K

Select item 28494456.

Interaction of an Essential Escherichia coli GTPase, Der, with the 50S Ribosome via the KH-Like Domain

Jihwan Hwang, Masayori Inouye

J Bacteriol. 2010 Apr; 192(8): 2277–2283. Published online 2010 Feb 19. doi: 10.1128/JB.00045-10

PMCID:: PMC2849445

Abstract Article PDF–1.5M

Select item 27254567.

Significant Enhanced Expression and Solubility of Human Proteins in Escherichia coli by Fusion with Protein S from Myxococcus xanthus

Hiroshi Kobayashi, Takeshi Yoshida, Masayori Inouye

Appl Environ Microbiol. 2009 Aug; 75(16): 5356–5362. Published online 2009 Jun 19. doi: 10.1128/AEM.00691-09

PMCID:: PMC2725456

Abstract Article PDF–978K

Select item 26734438.

Distinct GDP/GTP bound states of the tandem G-domains of EngA regulate ribosome binding

Sushil Kumar Tomar, Neha Dhimole, Moon Chatterjee, Balaji Prakash

Nucleic Acids Res. 2009 Apr; 37(7): 2359–2370. Published online 2009 Feb 26. doi: 10.1093/nar/gkp107

PMCID:: PMC2673443

Abstract Article PDF–8.6M

Select item 23473709.

RelA Functionally Suppresses the Growth Defect Caused by a Mutation in the G Domain of the Essential Der Protein

Jihwan Hwang, Masayori Inouye

J Bacteriol. 2008 May; 190(9): 3236–3243. Published online 2008 Feb 22. doi: 10.1128/JB.01758-07

PMCID:: PMC2347370

Abstract Article PDF–747K

Select item 229217710.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 221170611.

Functional analysis of the GTPases EngA and YhbZ encoded by Salmonella typhimurium

Heather K. Lamb, Paul Thompson, Catherine Elliott, Ian G. Charles, Jamie Richards, Michael Lockyer, Nicholas Watkins, Charles Nichols, David K. Stammers, Clive R. Bagshaw, Alan Cooper, Alastair R. Hawkins

Protein Sci. 2007 Nov; 16(11): 2391–2402. doi: 10.1110/ps.072900907

PMCID:: PMC2211706

Abstract Article PDF–457K

Select item 187459312.

Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes

Rory M. Watt, Jing Wang, Meikid Leong, Hsiang-fu Kung, Kathryn S.E. Cheah, Depei Liu, Antoine Danchin, Jian-Dong Huang

Nucleic Acids Res. 2007 Mar; 35(6): e37. Published online 2007 Jan 31. doi: 10.1093/nar/gkl1158

PMCID:: PMC1874593

Abstract Article PDF–5.3M

Select item 168148213.

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba, Takeshi Ara, Miki Hasegawa, Yuki Takai, Yoshiko Okumura, Miki Baba, Kirill A Datsenko, Masaru Tomita, Barry L Wanner, Hirotada Mori

Mol Syst Biol. 2006; 2: 2006.0008. Published online 2006 Feb 21. doi: 10.1038/msb4100050

PMCID:: PMC1681482

Abstract Article PDF–400K

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 163630515.

Cooperative and Critical Roles for Both G Domains in the GTPase Activity and Cellular Function of Ribosome-Associated Escherichia coli EngA

Amrita Bharat, Mengxi Jiang, Susan M. Sullivan, Janine R. Maddock, Eric D. Brown

J Bacteriol. 2006 Nov; 188(22): 7992–7996. Published online 2006 Sep 8. doi: 10.1128/JB.00959-06

PMCID:: PMC1636305

Abstract Article PDF–120K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405