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Items: 1 to 20 of 83

1.
Single-molecule dynamics of DNA gyrase in evolutionarily distant bacteria Mycobacterium tuberculosis and Escherichia coli
Cooper J. Galvin, Matthew Hobson, Jonathan Xianglong Meng, Athena Ierokomos, Ivan E. Ivanov, James M. Berger, Zev Bryant
J Biol Chem. 2023 May; 299(5): 103003. Published online 2023 Feb 11. doi: 10.1016/j.jbc.2023.103003
PMCID:
PMC10130225
AbstractArticlePDF–3.1M
2.
Escherichia coli GyrA Tower Domain Interacts with QnrB1 Loop B and Plays an Important Role in QnrB1 Protection from Quinolone Inhibition
Chunhui Chen, Yin Wang, Hidemasa Nakaminami, Eu Suk Kim, George A. Jacoby, David C. Hooper
Antimicrob Agents Chemother. 2021 Jul; 65(7): e00402-21. Prepublished online 2021 Apr 12. Published online 2021 Jun 17. doi: 10.1128/AAC.00402-21
PMCID:
PMC8373224
AbstractArticlePDF–740K
3.
Modulated control of DNA supercoiling balance by the DNA-wrapping domain of bacterial gyrase
Matthew J Hobson, Zev Bryant, James M Berger
Nucleic Acids Res. 2020 Feb 28; 48(4): 2035–2049. Published online 2020 Jan 17. doi: 10.1093/nar/gkz1230
PMCID:
PMC7038939
AbstractArticlePDF–7.0M
4.
Single-molecule imaging of DNA gyrase activity in living Escherichia coli
Mathew Stracy, Adam J M Wollman, Elzbieta Kaja, Jacek Gapinski, Ji-Eun Lee, Victoria A Leek, Shannon J McKie, Lesley A Mitchenall, Anthony Maxwell, David J Sherratt, Mark C Leake, Pawel Zawadzki
Nucleic Acids Res. 2019 Jan 10; 47(1): 210–220. Published online 2018 Nov 16. doi: 10.1093/nar/gky1143
PMCID:
PMC6326794
AbstractArticlePDF–1.2M
5.
Inhibition of the gyrA promoter by transcription-coupled DNA supercoiling in Escherichia coli
Samantha Dages, Kelley Dages, Xiaoduo Zhi, Fenfei Leng
Sci Rep. 2018; 8: 14759. Published online 2018 Oct 3. doi: 10.1038/s41598-018-33089-4
PMCID:
PMC6170449
AbstractArticlePDF–2.5M
6.
Analytical profiling of mutations in quinolone resistance determining region of gyrA gene among UPEC
Lesley R. Varughese, Meenakshi Rajpoot, Soniya Goyal, Ravinder Mehra, Vinod Chhokar, Vikas Beniwal
PLoS One. 2018; 13(1): e0190729. Published online 2018 Jan 4. doi: 10.1371/journal.pone.0190729
PMCID:
PMC5754135
AbstractArticlePDF–8.3M
7.
A New Crystal Structure of the Bifunctional Antibiotic Simocyclinone D8 Bound to DNA Gyrase Gives Fresh Insight into the Mechanism of Inhibition
Stephen J. Hearnshaw, Marcus J. Edwards, Clare E. Stevenson, David M. Lawson, Anthony Maxwell
J Mol Biol. 2014 May 15; 426(10): 2023–2033. doi: 10.1016/j.jmb.2014.02.017
PMCID:
PMC4018983
AbstractArticle
8.
Fluoroquinolone-Gyrase-DNA Complexes: TWO MODES OF DRUG BINDING
Arkady Mustaev, Muhammad Malik, Xilin Zhao, Natalia Kurepina, Gan Luan, Lisa M. Oppegard, Hiroshi Hiasa, Kevin R. Marks, Robert J. Kerns, James M. Berger, Karl Drlica
J Biol Chem. 2014 May 2; 289(18): 12300–12312. Published online 2014 Feb 4. doi: 10.1074/jbc.M113.529164
PMCID:
PMC4007428
AbstractArticlePDF–3.0M
9.
The C-Terminal Part of Microcin B Is Crucial for DNA Gyrase Inhibition and Antibiotic Uptake by Sensitive Cells
Irina Shkundina, Marina Serebryakova, Konstantin Severinov
J Bacteriol. 2014 May; 196(9): 1759–1767. doi: 10.1128/JB.00015-14
PMCID:
PMC3993328
AbstractArticlePDF–808K
10.
Benchmarking yeast two-hybrid systems using the interactions of bacterial motility proteins
Seesandra Venkatappa Rajagopala, Kelly T. Hughes, Peter Uetz
Proteomics. Author manuscript; available in PMC 2010 Feb 9.
Published in final edited form as: Proteomics. 2009 Dec; 9(23): 5296. doi: 10.1002/pmic.200900282
PMCID:
PMC2818629
AbstractArticlePDF–1.4M
11.
Driving Forces of Gyrase Recognition by the Addiction Toxin CcdB
Mario Simic, Natalie De Jonge, Remy Loris, Gorazd Vesnaver, Jurij Lah
J Biol Chem. 2009 Jul 24; 284(30): 20002–20010. Published online 2009 May 22. doi: 10.1074/jbc.M109.014035
PMCID:
PMC2740426
AbstractArticlePDF–2.1M
12.
Crystallization and preliminary X-ray analysis of a complex formed between the antibiotic simocyclinone D8 and the DNA breakage–reunion domain of Escherichia coli DNA gyrase
Marcus J. Edwards, Ruth H. Flatman, Lesley A. Mitchenall, Clare E. M. Stevenson, Anthony Maxwell, David M. Lawson
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Aug 1; 65(Pt 8): 846–848. Published online 2009 Jul 30. doi: 10.1107/S1744309109028097
PMCID:
PMC2720350
AbstractArticlePDF–117K
13.
Interplay in the Selection of Fluoroquinolone Resistance and Bacterial Fitness
Linda L. Marcusson, Niels Frimodt-Møller, Diarmaid Hughes
PLoS Pathog. 2009 Aug; 5(8): e1000541. Published online 2009 Aug 7. doi: 10.1371/journal.ppat.1000541
PMCID:
PMC2714960
AbstractArticlePDF–313K
14.
Internal Dynamics of Supercoiled DNA Molecules
Thomas Kalkbrenner, Axel Arnold, Sander J. Tans
Biophys J. 2009 Jun 17; 96(12): 4951–4955. doi: 10.1016/j.bpj.2009.03.056
PMCID:
PMC2712042
AbstractArticlePDF–251K
15.
Bacterial DNA topology and infectious disease
Charles J. Dorman, Colin P. Corcoran
Nucleic Acids Res. 2009 Feb; 37(3): 672–678. Published online 2008 Dec 10. doi: 10.1093/nar/gkn996
PMCID:
PMC2647292
AbstractArticlePDF–122K
16.
Use of Gyrase Resistance Mutants To Guide Selection of 8-Methoxy-Quinazoline-2,4-Diones
Nadezhda German, Muhammad Malik, Jonathan D. Rosen, Karl Drlica, Robert J. Kerns
Antimicrob Agents Chemother. 2008 Nov; 52(11): 3915–3921. Published online 2008 Sep 2. doi: 10.1128/AAC.00330-08
PMCID:
PMC2573108
AbstractArticlePDF–510K
17.
YacG from Escherichia coli is a specific endogenous inhibitor of DNA gyrase
Sugopa Sengupta, Valakunja Nagaraja
Nucleic Acids Res. 2008 Aug; 36(13): 4310–4316. Published online 2008 Jun 27. doi: 10.1093/nar/gkn355
PMCID:
PMC2490753
AbstractArticlePDF–337K
18.
Biological Activities of Novel Gyrase Inhibitors of the Aminocoumarin Class
Christine Anderle, Martin Stieger, Matthew Burrell, Stefan Reinelt, Anthony Maxwell, Malcolm Page, Lutz Heide
Antimicrob Agents Chemother. 2008 Jun; 52(6): 1982–1990. Published online 2008 Mar 17. doi: 10.1128/AAC.01235-07
PMCID:
PMC2415755
AbstractArticlePDF–469K
19.
Protein abundance profiling of the Escherichia coli cytosol
Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman
BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102
PMCID:
PMC2292177
AbstractArticlePDF–1.0M
20.
Contributions of the Combined Effects of Topoisomerase Mutations toward Fluoroquinolone Resistance in Escherichia coli
Sonia K. Morgan-Linnell, Lynn Zechiedrich
Antimicrob Agents Chemother. 2007 Nov; 51(11): 4205–4208. Published online 2007 Aug 6. doi: 10.1128/AAC.00647-07
PMCID:
PMC2151436
AbstractArticlePDF–273K

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