PMC Links for GEO Profiles (Select 49310986) - PMC

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Items: 18

Select item 41238551.

The binary protein-protein interaction landscape of Escherichia coli

Seesandra V. Rajagopala, Patricia Sikorski, Ashwani Kumar, Roberto Mosca, James Vlasblom, Roland Arnold, Jonathan Franca-Koh, Suman B. Pakala, Sadhna Phanse, Arnaud Ceol, Roman Häuser, Gabriella Siszler, Stefan Wuchty, Andrew Emili, Mohan Babu, Patrick Aloy, Rembert Pieper, Peter Uetz

Nat Biotechnol. Author manuscript; available in PMC 2014 Sep 1.

Published in final edited form as: Nat Biotechnol. 2014 Mar; 32(3): 285–290. Published online 2014 Feb 23. doi: 10.1038/nbt.2831

PMCID:: PMC4123855

Abstract Article PDF–1.1M

Select item 37040042.

General approach to reversing ketol-acid reductoisomerase cofactor dependence from NADPH to NADH

Sabine Brinkmann-Chen, Tilman Flock, Jackson K. B. Cahn, Christopher D. Snow, Eric M. Brustad, John A. McIntosh, Peter Meinhold, Liang Zhang, Frances H. Arnold

Proc Natl Acad Sci U S A. 2013 Jul 2; 110(27): 10946–10951. Published online 2013 Jun 17. doi: 10.1073/pnas.1306073110

PMCID:: PMC3704004

Abstract Article PDF–1.4M

Select item 27946603.

Nitrosative stress treatment of E. coli targets distinct set of thiol-containing proteins

Nicolas Brandes, Andrea Rinck, Lars Ingo Leichert, Ursula Jakob

Mol Microbiol. Author manuscript; available in PMC 2009 Dec 16.

Published in final edited form as: Mol Microbiol. 2007 Nov; 66(4): 901–914. Published online 2007 Oct 5. doi: 10.1111/j.1365-2958.2007.05964.x

PMCID:: PMC2794660

Abstract Article PDF–1.5M

Select item 22921774.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 22532335.

The crystal structure of a bacterial Class II ketol-acid reductoisomerase: Domain conservation and evolution

Rajiv Tyagi, Stephane Duquerroy, Jorge Navaza, Luke W. Guddat, Ronald G. Duggleby

Protein Sci. 2005 Dec; 14(12): 3089–3100. doi: 10.1110/ps.051791305

PMCID:: PMC2253233

Abstract Article PDF–895K

Select item 16982096.

Experimental and Computational Assessment of Conditionally Essential Genes in Escherichia coli

Andrew R. Joyce, Jennifer L. Reed, Aprilfawn White, Robert Edwards, Andrei Osterman, Tomoya Baba, Hirotada Mori, Scott A. Lesely, Bernhard Ø. Palsson, Sanjay Agarwalla

J Bacteriol. 2006 Dec; 188(23): 8259–8271. Published online 2006 Sep 29. doi: 10.1128/JB.00740-06

PMCID:: PMC1698209

Abstract Article PDF–779K

Select item 16814817.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 14893148.

Generating Tetracycline-Inducible Auxotrophy in Escherichia coli and Salmonella enterica Serovar Typhimurium by Using an Insertion Element and a Hyperactive Transposase

Martin Köstner, Britta Schmidt, Ralph Bertram, Wolfgang Hillen

Appl Environ Microbiol. 2006 Jul; 72(7): 4717–4725. doi: 10.1128/AEM.00492-06

PMCID:: PMC1489314

Abstract Article PDF–329K

Select item 14570529.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520010.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405