PMC Links for GEO Profiles (Select 49313507) - PMC

Result Filters

Links from GEO Profiles

Items: 1 to 20 of 22

<< First< Prev

Page of 2

Next >Last >>

Select item 63668611.

Affinity-based capture and identification of protein effectors of the growth regulator ppGpp

Boyuan Wang, Peng Dai, David Ding, Amanda Del Rosario, Robert A. Grant, Bradley L. Pentelute, Michael T. Laub

Nat Chem Biol. Author manuscript; available in PMC 2019 Jun 17.

Published in final edited form as: Nat Chem Biol. 2019 Feb; 15(2): 141–150. Published online 2018 Dec 17. doi: 10.1038/s41589-018-0183-4

Correction in:: Nat Chem Biol. 2019 May 10

PMCID:: PMC6366861

Abstract Article PDF–2.2M

Select item 61917162.

Reconstitution of 30S ribosomal subunits in vitro using ribosome biogenesis factors

Daichi Tamaru, Kazuaki Amikura, Yoshihiro Shimizu, Knud H. Nierhaus, Takuya Ueda

RNA. 2018 Nov; 24(11): 1512–1519. doi: 10.1261/rna.065615.118

PMCID:: PMC6191716

Abstract Article PDF–771K

Select item 58450043.

Novel (p)ppGpp Binding and Metabolizing Proteins of Escherichia coli

Yong Zhang, Eva Zborníková, Dominik Rejman, Kenn Gerdes

mBio. 2018 Mar-Apr; 9(2): e02188-17. Published online 2018 Mar 6. doi: 10.1128/mBio.02188-17

PMCID:: PMC5845004

Abstract Article PDF–3.1M

Select item 54108454.

The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly

Aida Razi, Alba Guarné, Joaquin Ortega

Proc Natl Acad Sci U S A. 2017 Apr 25; 114(17): E3396–E3403. Published online 2017 Apr 10. doi: 10.1073/pnas.1618016114

PMCID:: PMC5410845

Abstract Article PDF–1.9M

Select item 44366715.

The C-terminal helix in the YjeQ zinc-finger domain catalyzes the release of RbfA during 30S ribosome subunit assembly

Ajitha Jeganathan, Aida Razi, Brett Thurlow, Joaquin Ortega

RNA. 2015 Jun; 21(6): 1203–1216. doi: 10.1261/rna.049171.114

PMCID:: PMC4436671

Abstract Article PDF–335K

Select item 31985956.

Cryo-electron microscopy structure of the 30S subunit in complex with the YjeQ biogenesis factor

Ahmad Jomaa, Geordie Stewart, Jason A. Mears, Inga Kireeva, Eric D. Brown, Joaquin Ortega

RNA. 2011 Nov; 17(11): 2026–2038. doi: 10.1261/rna.2922311

PMCID:: PMC3198595

Abstract Article PDF–1.1M

Select item 31561737.

Structural basis for the function of a small GTPase RsgA on the 30S ribosomal subunit maturation revealed by cryoelectron microscopy

Qiang Guo, Yi Yuan, Yanji Xu, Boya Feng, Liang Liu, Kai Chen, Ming Sun, Zhixiu Yang, Jianlin Lei, Ning Gao

Proc Natl Acad Sci U S A. 2011 Aug 9; 108(32): 13100-13105. Published online 2011 Jul 25. doi: 10.1073/pnas.1104645108

PMCID:: PMC3156173

Abstract Article PDF–1.2M

Select item 30621808.

Understanding ribosome assembly: the structure of in vivo assembled immature 30S subunits revealed by cryo-electron microscopy

Ahmad Jomaa, Geordie Stewart, Jaime Martín-Benito, Ryszard Zielke, Tracey L. Campbell, Janine R. Maddock, Eric D. Brown, Joaquin Ortega

RNA. 2011 Apr; 17(4): 697–709. doi: 10.1261/rna.2509811

PMCID:: PMC3062180

Abstract Article PDF–654K

Select item 27430559.

Removal of a ribosome small subunit-dependent GTPase confers salt resistance on Escherichia coli cells

Yoichi Hase, Shinichiro Yokoyama, Akira Muto, Hyouta Himeno

RNA. 2009 Sep; 15(9): 1766–1774. doi: 10.1261/rna.1687309

PMCID:: PMC2743055

Abstract Article PDF–536K

Select item 233974610.

Structure of the ribosomal interacting GTPase YjeQ from the enterobacterial species Salmonella typhimurium

C. E. Nichols, C. Johnson, H. K. Lamb, M. Lockyer, I. G. Charles, A. R. Hawkins, D. K. Stammers

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Nov 1; 63(Pt 11): 922–928. Published online 2007 Oct 24. doi: 10.1107/S1744309107048609

PMCID:: PMC2339746

Abstract Article PDF–1.6M

Select item 229317711.

Genetic Interaction Screens with Ordered Overexpression and Deletion Clone Sets Implicate the Escherichia coli GTPase YjeQ in Late Ribosome Biogenesis

Tracey L. Campbell, Eric D. Brown

J Bacteriol. 2008 Apr; 190(7): 2537–2545. Published online 2008 Jan 25. doi: 10.1128/JB.01744-07

PMCID:: PMC2293177

Abstract Article PDF–236K

Select item 229217712.

Protein abundance profiling of the Escherichia coli cytosol

Yasushi Ishihama, Thorsten Schmidt, Juri Rappsilber, Matthias Mann, F Ulrich Hartl, Michael J Kerner, Dmitrij Frishman

BMC Genomics. 2008; 9: 102. Published online 2008 Feb 27. doi: 10.1186/1471-2164-9-102

PMCID:: PMC2292177

Abstract Article PDF–1.0M

Select item 179730913.

Genome-Wide Screening of Genes Required for Swarming Motility in Escherichia coli K-12

Tetsuyoshi Inoue, Ryuji Shingaki, Shotaro Hirose, Kaori Waki, Hirotada Mori, Kazuhiro Fukui

J Bacteriol. 2007 Feb; 189(3): 950–957. Published online 2006 Nov 22. doi: 10.1128/JB.01294-06

PMCID:: PMC1797309

Abstract Article PDF–141K

Select item 168148114.

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

Koji Hayashi, Naoki Morooka, Yoshihiro Yamamoto, Katsutoshi Fujita, Katsumi Isono, Sunju Choi, Eiichi Ohtsubo, Tomoya Baba, Barry L Wanner, Hirotada Mori, Takashi Horiuchi

Mol Syst Biol. 2006; 2: 2006.0007. Published online 2006 Feb 21. doi: 10.1038/msb4100049

PMCID:: PMC1681481

Abstract Article PDF–141K

Select item 145705215.

Large-scale identification of protein–protein interaction of Escherichia coli K-12

Mohammad Arifuzzaman, Maki Maeda, Aya Itoh, Kensaku Nishikata, Chiharu Takita, Rintaro Saito, Takeshi Ara, Kenji Nakahigashi, Hsuan-Cheng Huang, Aki Hirai, Kohei Tsuzuki, Seira Nakamura, Mohammad Altaf-Ul-Amin, Taku Oshima, Tomoya Baba, Natsuko Yamamoto, Tomoyo Kawamura, Tomoko Ioka-Nakamichi, Masanari Kitagawa, Masaru Tomita, Shigehiko Kanaya, Chieko Wada, Hirotada Mori

Genome Res. 2006 May; 16(5): 686–691. doi: 10.1101/gr.4527806

PMCID:: PMC1457052

Abstract Article PDF–536K

Select item 132520016.

Escherichia coli K-12: a cooperatively developed annotation snapshot—2005

Monica Riley, Takashi Abe, Martha B. Arnaud, Mary K.B. Berlyn, Frederick R. Blattner, Roy R. Chaudhuri, Jeremy D. Glasner, Takashi Horiuchi, Ingrid M. Keseler, Takehide Kosuge, Hirotada Mori, Nicole T. Perna, Guy Plunkett, III, Kenneth E. Rudd, Margrethe H. Serres, Gavin H. Thomas, Nicholas R. Thomson, David Wishart, Barry L. Wanner

Nucleic Acids Res. 2006; 34(1): 1–9. Published online 2006 Jan 5. doi: 10.1093/nar/gkj405

PMCID:: PMC1325200

Abstract Article PDF–204K

Select item 118073517.

Characterization of the Bacillus subtilis GTPase YloQ and its role in ribosome function

Tracey L. Campbell, Denis M. Daigle, Eric D. Brown

Biochem J. 2005 Aug 1; 389(Pt 3): 843–852. Prepublished online 2005 Apr 14. Published online 2005 Jul 26. doi: 10.1042/BJ20041873

PMCID:: PMC1180735

Abstract Article PDF–570K

Select item 52167118.

A novel GTPase activated by the small subunit of ribosome

Hyouta Himeno, Kyoko Hanawa-Suetsugu, Takatsugu Kimura, Kuniaki Takagi, Wakana Sugiyama, Shinobu Shirata, Tomoyuki Mikami, Fujiko Odagiri, Yukiko Osanai, Daisuke Watanabe, Simon Goto, Liliya Kalachnyuk, Chisato Ushida, Akira Muto

Nucleic Acids Res. 2004; 32(17): 5303–5309. Published online 2004 Oct 5. doi: 10.1093/nar/gkh861