PMC Links for GEO Profiles (Select 49562227) - PMC

Select item 73734311.

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death

Walter R Mancia Leon, Julien Spatazza, Benjamin Rakela, Ankita Chatterjee, Viraj Pande, Tom Maniatis, Andrea R Hasenstaub, Michael P Stryker, Arturo Alvarez-Buylla

eLife. 2020; 9: e55374. Published online 2020 Jul 7. doi: 10.7554/eLife.55374

PMCID:: PMC7373431

Abstract Article PDF–11M

Select item 68115082.

Snf2h Drives Chromatin Remodeling to Prime Upper Layer Cortical Neuron Development

Matías Alvarez-Saavedra, Keqin Yan, Yves De Repentigny, Lukas E. Hashem, Nidhi Chaudary, Shihab Sarwar, Doo Yang, Ilya Ioshikhes, Rashmi Kothary, Teruyoshi Hirayama, Takeshi Yagi, David J. Picketts

Front Mol Neurosci. 2019; 12: 243. Published online 2019 Oct 17. doi: 10.3389/fnmol.2019.00243

PMCID:: PMC6811508

Abstract Article PDF–4.6M

Select item 63316523.

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons

Adrienne Elbert, Daniel Vogt, Ashley Watson, Michael Levy, Yan Jiang, Emilie Brûlé, Megan E. Rowland, John Rubenstein, Nathalie G. Bérubé

J Neurosci. 2019 Jan 2; 39(1): 177–192. doi: 10.1523/JNEUROSCI.3496-17.2018

PMCID:: PMC6331652

Abstract Article PDF–5.8M

Select item 34315974.

Single-neuron diversity generated by Protocadherin-β cluster in mouse central and peripheral nervous systems

Keizo Hirano, Ryosuke Kaneko, Takeshi Izawa, Masahumi Kawaguchi, Takashi Kitsukawa, Takeshi Yagi

Front Mol Neurosci. 2012; 5: 90. Prepublished online 2012 Aug 9. Published online 2012 Aug 31. doi: 10.3389/fnmol.2012.00090

PMCID:: PMC3431597

Abstract Article PDF–2.6M

Select item 31780595.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 27769776.

Frequent Long-Range Epigenetic Silencing of Protocadherin Gene Clusters on Chromosome 5q31 in Wilms' Tumor

Anthony R. Dallosso, Anne L. Hancock, Marianna Szemes, Kim Moorwood, Laxmi Chilukamarri, Hsin-Hao Tsai, Abby Sarkar, Jonathan Barasch, Raisa Vuononvirta, Chris Jones, Kathy Pritchard-Jones, Brigitte Royer-Pokora, Sean Bong Lee, Ceris Owen, Sally Malik, Yi Feng, Marcus Frank, Andrew Ward, Keith W. Brown, Karim Malik

PLoS Genet. 2009 Nov; 5(11): e1000745. Published online 2009 Nov 26. doi: 10.1371/journal.pgen.1000745

Correction in:: PLoS Genet. 2009 Dec; 5(12): 10.1371/annotation/012d5a44-8239-4057-8c3b-3dc159ea3a02.

PMCID:: PMC2776977

Abstract Article PDF–887K

Select item 3110487.

Comparative DNA Sequence Analysis of Mouse and Human Protocadherin Gene Clusters

Qiang Wu, Theresa Zhang, Jan-Fang Cheng, Youngwook Kim, Jane Grimwood, Jeremy Schmutz, Mark Dickson, James P. Noonan, Michael Q. Zhang, Richard M. Myers, Tom Maniatis

Genome Res. 2001 Mar; 11(3): 389–404. doi: 10.1101/gr.167301

PMCID:: PMC311048

Abstract Article PDF–1.7M

Select item 3109928.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 3109809.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924110.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 2980011.

Database resources of the National Center for Biotechnology Information

David L. Wheeler, Deanna M. Church, Alex E. Lash, Detlef D. Leipe, Thomas L. Madden, Joan U. Pontius, Gregory D. Schuler, Lynn M. Schriml, Tatiana A. Tatusova, Lukas Wagner, Barbara A. Rapp

Nucleic Acids Res. 2001 Jan 1; 29(1): 11–16. doi: 10.1093/nar/29.1.11

PMCID:: PMC29800

Abstract Article PDF–101K

Select item 1620312.

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes

Qiang Wu, Tom Maniatis

Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3124–3129. Published online 2000 Mar 14. doi: 10.1073/pnas.060027397

PMCID:: PMC16203

Abstract Article PDF–254K

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