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Select item 88859041.

The plasminogen receptor Plg-R_KT regulates adipose function and metabolic homeostasis

Fahumiya Samad, Hongdong Bai, Nagyung Baik, Patrick Haider, Yuqing Zhang, Gersina Rega-Kaun, Christoph Kaun, Manfred Prager, Johann Wojta, Quyen Bui, Sagarika Chakrabarty, Jing Wang, Robert J. Parmer, Lindsey A. Miles

J Thromb Haemost. Author manuscript; available in PMC 2023 Mar 1.

Published in final edited form as: J Thromb Haemost. 2022 Mar; 20(3): 742–754. Published online 2021 Dec 21. doi: 10.1111/jth.15622

PMCID:: PMC8885904

Abstract Article PDF–2.7M

Select item 78208732.

Exposure of plasminogen and a novel plasminogen receptor, Plg-R_KT, on activated human and murine platelets

Claire S. Whyte, Gael B. Morrow, Nagyung Baik, Nuala A. Booth, Mohammed M. Jalal, Robert J. Parmer, Lindsey A. Miles, Nicola J. Mutch

Blood. 2021 Jan 14; 137(2): 248–257. Prepublished online 2020 Aug 25. doi: 10.1182/blood.2020007263

PMCID:: PMC7820873

Abstract Article

Select item 77334903.

The plasminogen receptor, Plg-R_KT, plays a role in inflammation and fibrinolysis during cutaneous wound healing in mice

Lina Ny, Robert J. Parmer, Yue Shen, Sandra Holmberg, Nagyung Baik, Assar Bäckman, Jessica Broden, Malgorzata Wilczynska, Tor Ny, Lindsey A. Miles

Cell Death Dis. 2020 Dec; 11(12): 1054. Published online 2020 Dec 12. doi: 10.1038/s41419-020-03230-1

PMCID:: PMC7733490

Abstract Article PDF–3.0M

Select item 74159914.

BioID screening of biotinylation sites using the avidin-like protein Tamavidin 2-REV identifies global interactors of stimulator of interferon genes (STING)

Kou Motani, Hidetaka Kosako

J Biol Chem. 2020 Aug 7; 295(32): 11174–11183. Published online 2020 Jun 17. doi: 10.1074/jbc.RA120.014323

PMCID:: PMC7415991

Abstract Article PDF–2.0M

Select item 66110805.

Plasminogen and the Plasminogen Receptor, Plg-R_KT, Regulate Macrophage Phenotypic, and Functional Changes

Juliana P. Vago, Michelle A. Sugimoto, Kátia M. Lima, Graziele L. Negreiros-Lima, Nagyung Baik, Mauro M. Teixeira, Mauro Perretti, Robert J. Parmer, Lindsey A. Miles, Lirlândia P. Sousa

Front Immunol. 2019; 10: 1458. Published online 2019 Jun 28. doi: 10.3389/fimmu.2019.01458

PMCID:: PMC6611080

Abstract Article PDF–3.6M

Select item 59652816.

The Plasminogen Receptor, Plg-R_KT, is Essential for Mammary Lobuloalveolar Development and Lactation

Lindsey A. Miles, Nagyung Baik, Hongdong Bai, Helen P. Makarenkova, William B. Kiosses, Stan Krajewski, Francis J. Castellino, Alex Valenzuela, Nissi M. Varki, Barbara M. Mueller, Robert J. Parmer

J Thromb Haemost. Author manuscript; available in PMC 2019 May 1.

Published in final edited form as: J Thromb Haemost. 2018 May; 16(5): 919–932. Published online 2018 Apr 1. doi: 10.1111/jth.13988

PMCID:: PMC5965281

Abstract Article PDF–2.7M

Select item 52802147.

Deficiency of Plasminogen Receptor, Plg-R_KT, Causes Defects in Plasminogen Binding and Inflammatory Macrophage Recruitment in vivo

L. A. Miles, N. Baik, S. Lighvani, S. Khaldoyanidi, N. M. Varki, H. Bai, B.M. Mueller, R. J. Parmer

J Thromb Haemost. Author manuscript; available in PMC 2018 Jan 1.

Published in final edited form as: J Thromb Haemost. 2017 Jan; 15(1): 155–162. Published online 2016 Nov 28. doi: 10.1111/jth.13532

PMCID:: PMC5280214

Abstract Article PDF–606K

Select item 40734948.

The Central Role of EED in the Orchestration of Polycomb Group Complexes

Qi Cao, Xiaoju Wang, Meng Zhao, Rendong Yang, Rohit Malik, Yuanyuan Qiao, Anton Poliakov, Anastasia K. Yocum, Yong Li, Wei Chen, Xuhong Cao, Xia Jiang, Arun Dahiya, Clair Harris, Felix Y. Feng, Sundeep Kalantry, Zhaohui S. Qin, Saravana M. Dhanasekaran, Arul M. Chinnaiyan

Nat Commun. Author manuscript; available in PMC 2014 Jul 24.

Published in final edited form as: Nat Commun. 2014; 5: 3127. doi: 10.1038/ncomms4127

PMCID:: PMC4073494

Abstract Article PDF–2.1M

Select item 35724109.

A conditional knockout resource for the genome–wide study of mouse gene function

William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley

Nature. Author manuscript; available in PMC 2013 Feb 14.

Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163

PMCID:: PMC3572410

Abstract Article PDF–1.1M

Select item 321736110.

Regulation of macrophage migration by a novel plasminogen receptor Plg-R_KT

Shahrzad Lighvani, Nagyung Baik, Jenna E. Diggs, Sophia Khaldoyanidi, Robert J. Parmer, Lindsey A. Miles

Blood. 2011 Nov 17; 118(20): 5622–5630. Prepublished online 2011 Sep 22. doi: 10.1182/blood-2011-03-344242

PMCID:: PMC3217361

Abstract Article

Select item 319092111.

The Novel Plasminogen Receptor, Plasminogen Receptor_KT (Plg-R_KT), Regulates Catecholamine Release

Hongdong Bai, Nagyung Baik, William B. Kiosses, Stan Krajewski, Lindsey A. Miles, Robert J. Parmer

J Biol Chem. 2011 Sep 23; 286(38): 33125–33133. Published online 2011 Jul 27. doi: 10.1074/jbc.M111.218693

PMCID:: PMC3190921

Abstract Article PDF–2.4M

Select item 317805912.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 302253413.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 282675714.

Proteomics-based discovery of a novel, structurally unique, and developmentally regulated plasminogen receptor, Plg-R_KT, a major regulator of cell surface plasminogen activation

Nicholas M. Andronicos, Emily I. Chen, Nagyung Baik, Hongdong Bai, Caitlin M. Parmer, William B. Kiosses, Mark P. Kamps, John R. Yates, III, Robert J. Parmer, Lindsey A. Miles

Blood. 2010 Feb 18; 115(7): 1319–1330. Prepublished online 2009 Nov 6. doi: 10.1182/blood-2008-11-188938

PMCID:: PMC2826757

Abstract Article

Select item 277884415.

A mitochondrial protein compendium elucidates complex I disease biology

David J. Pagliarini, Sarah E. Calvo, Betty Chang, Sunil A. Sheth, Scott B. Vafai, Shao-En Ong, Geoffrey A. Walford, Canny Sugiana, Avihu Boneh, William K. Chen, David E. Hill, Marc Vidal, James G. Evans, David R. Thorburn, Steven A. Carr, Vamsi K. Mootha

Cell. Author manuscript; available in PMC 2009 Nov 18.

Published in final edited form as: Cell. 2008 Jul 11; 134(1): 112–123. doi: 10.1016/j.cell.2008.06.016

PMCID:: PMC2778844

Abstract Article PDF–1.2M

Select item 255627016.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 52892817.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 31099218.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098019.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 28355420.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

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