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Items: 1 to 20 of 49

1.
Multiple roles for the cytoplasmic C-terminal domains of the yeast cell surface receptors Rgt2 and Snf3 in glucose sensing and signaling
Jeong-Ho Kim, Levi Mailloux, Daniel Bloor, Haeun Tae, Han Nguyen, Morgan McDowell, Jaqueline Padilla, Anna DeWaard
Sci Rep. 2024; 14: 4055. Published online 2024 Feb 19. doi: 10.1038/s41598-024-54628-2
PMCID:
PMC10876965
AbstractArticlePDF–2.7M
2.
Systematic analysis of membrane contact sites in Saccharomyces cerevisiae uncovers modulators of cellular lipid distribution
Inês Gomes Castro, Shawn P Shortill, Samantha Katarzyna Dziurdzik, Angela Cadou, Suriakarthiga Ganesan, Rosario Valenti, Yotam David, Michael Davey, Carsten Mattes, Ffion B Thomas, Reut Ester Avraham, Hadar Meyer, Amir Fadel, Emma J Fenech, Robert Ernst, Vanina Zaremberg, Tim P Levine, Christopher Stefan, Elizabeth Conibear, Maya Schuldiner
eLife. 2022; 11: e74602. Published online 2022 Nov 10. doi: 10.7554/eLife.74602
PMCID:
PMC9648973
AbstractArticlePDF–8.0M
3.
New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources
Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry
Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224
PMCID:
PMC9209811
AbstractArticlePDF–818K
4.
A putative bet hedging strategy buffers budding yeast against environmental instability
Laura E. Bagamery, Quincey A. Justman, Ethan C. Garner, Andrew W. Murray
Curr Biol. Author manuscript; available in PMC 2021 Dec 7.
Published in final edited form as: Curr Biol. 2020 Dec 7; 30(23): 4563–4578.e4. Published online 2020 Sep 24. doi: 10.1016/j.cub.2020.08.092
PMCID:
PMC7726042
AbstractArticlePDF–1.9M
5.
Simulating Extracellular Glucose Signals Enhances Xylose Metabolism in Recombinant Saccharomyces cerevisiae
Meiling Wu, Hongxing Li, Shan Wei, Hongyu Wu, Xianwei Wu, Xiaoming Bao, Jin Hou, Weifeng Liu, Yu Shen
Microorganisms. 2020 Jan; 8(1): 100. Published online 2020 Jan 10. doi: 10.3390/microorganisms8010100
PMCID:
PMC7022881
AbstractArticlePDF–1.8M
6.
A global interaction network maps a wiring diagram of cellular function
Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Oct 30.
Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420
PMCID:
PMC5661885
AbstractArticlePDF–2.6M
7.
The Genetic Landscape of a Cell
Michael Costanzo, Anastasia Baryshnikova, Jeremy Bellay, Yungil Kim, Eric D. Spear, Carolyn S. Sevier, Huiming Ding, Judice L.Y. Koh, Kiana Toufighi, Sara Mostafavi, Jeany Prinz, Robert P. St. Onge, Benjamin VanderSluis, Taras Makhnevych, Franco J. Vizeacoumar, Solmaz Alizadeh, Sondra Bahr, Renee L. Brost, Yiqun Chen, Murat Cokol, Raamesh Deshpande, Zhijian Li, Zhen-Yuan Lin, Wendy Liang, Michaela Marback, Jadine Paw, Bryan-Joseph San Luis, Ermira Shuteriqi, Amy Hin Yan Tong, Nydia van Dyk, Iain M. Wallace, Joseph A. Whitney, Matthew T. Weirauch, Guoqing Zhong, Hongwei Zhu, Walid A. Houry, Michael Brudno, Sasan Ragibizadeh, Balázs Papp, Csaba Pál, Frederick P. Roth, Guri Giaever, Corey Nislow, Olga G. Troyanskaya, Howard Bussey, Gary D. Bader, Anne-Claude Gingras, Quaid D. Morris, Philip M. Kim, Chris A. Kaiser, Chad L. Myers, Brenda J. Andrews, Charles Boone
Science. Author manuscript; available in PMC 2017 Sep 15.
Published in final edited form as: Science. 2010 Jan 22; 327(5964): 425–431. doi: 10.1126/science.1180823
PMCID:
PMC5600254
AbstractArticlePDF–2.4M
8.
Cellobiose Consumption Uncouples Extracellular Glucose Sensing and Glucose Metabolism in Saccharomyces cerevisiae
Kulika Chomvong, Daniel I. Benjamin, Daniel K. Nomura, Jamie H. D. Cate
mBio. 2017 Jul-Aug; 8(4): e00855-17. Published online 2017 Aug 8. doi: 10.1128/mBio.00855-17
PMCID:
PMC5550752
AbstractArticlePDF–1.0M
9.
Mapping the Synthetic Dosage Lethality Network of CDK1/CDC28
Christine Zimmermann, Ignacio Garcia, Manja Omerzu, Pierre Chymkowitch, Beibei Zhang, Jorrit M. Enserink
G3 (Bethesda) 2017 Jun; 7(6): 1753–1766. Published online 2017 Apr 18. doi: 10.1534/g3.117.042317
Correction in:
G3 (Bethesda). 2019 Aug; 9(8): 2787.
PMCID:
PMC5473755
AbstractArticlePDF–2.7M
10.
Systematic identification of genes involved in metabolic acid stress resistance in yeast and their potential as cancer targets
John J. Shin, Qurratulain Aftab, Pamela Austin, Jennifer A. McQueen, Tak Poon, Shu Chen Li, Barry P. Young, Calvin D. Roskelley, Christopher J. R. Loewen
Dis Model Mech. 2016 Sep 1; 9(9): 1039–1049. doi: 10.1242/dmm.023374
PMCID:
PMC5047693
AbstractArticle
11.
One library to make them all: Streamlining yeast library creation by a SWAp-Tag (SWAT) strategy
Ido Yofe, Uri Weill, Matthias Meurer, Silvia Chuartzman, Einat Zalckvar, Omer Goldman, Shifra Ben-Dor, Conny Schütze, Nils Wiedemann, Michael Knop, Anton Khmelinskii, Maya Schuldiner
Nat Methods. Author manuscript; available in PMC 2016 Sep 22.
Published in final edited form as: Nat Methods. 2016 Apr; 13(4): 371–378. Published online 2016 Feb 29. doi: 10.1038/nmeth.3795
PMCID:
PMC4869835
AbstractArticlePDF–2.7M
12.
The glucose metabolite methylglyoxal inhibits expression of the glucose transporter genes by inactivating the cell surface glucose sensors Rgt2 and Snf3 in yeast
Adhiraj Roy, Salman Hashmi, Zerui Li, Angela D. Dement, Kyu Hong Cho, Jeong-Ho Kim
Mol Biol Cell. 2016 Mar 1; 27(5): 862–871. doi: 10.1091/mbc.E15-11-0789
Correction in:
Mol Biol Cell. 2016 Oct 15; 27(20): 3178–3179.
PMCID:
PMC4803311
AbstractArticlePDF–1.4M
13.
Local Anesthetics and Antipsychotic Phenothiazines Interact Nonspecifically with Membranes and Inhibit Hexose Transporters in Yeast
Yukifumi Uesono, Akio Toh-e, Yoshiko Kikuchi, Tomoyuki Araki, Takushi Hachiya, Chihiro K. Watanabe, Ko Noguchi, Ichiro Terashima
Genetics. 2016 Mar; 202(3): 997–1012. Published online 2016 Jan 12. doi: 10.1534/genetics.115.183806
PMCID:
PMC4788134
AbstractArticlePDF–1.8M
14.
Saccharomyces cerevisiae–Based Platform for Rapid Production and Evaluation of Eukaryotic Nutrient Transporters and Transceptors for Biochemical Studies and Crystallography
Peter Scharff-Poulsen, Per Amstrup Pedersen
PLoS One. 2013; 8(10): e76851. Published online 2013 Oct 4. doi: 10.1371/journal.pone.0076851
PMCID:
PMC3790737
AbstractArticlePDF–1.7M
15.
Genome-Wide Study of the Adaptation of Saccharomyces cerevisiae to the Early Stages of Wine Fermentation
Maite Novo, Ana Mangado, Manuel Quirós, Pilar Morales, Zoel Salvadó, Ramon Gonzalez
PLoS One. 2013; 8(9): e74086. Published online 2013 Sep 5. doi: 10.1371/journal.pone.0074086
PMCID:
PMC3764036
AbstractArticlePDF–496K
16.
Maintenance of Mitochondrial Morphology by Autophagy and Its Role in High Glucose Effects on Chronological Lifespan of Saccharomyces cerevisiae
May T. Aung-Htut, Yuen T. Lam, Yu-Leng Lim, Mark Rinnerthaler, Cristy L. Gelling, Hongyuan Yang, Michael Breitenbach, Ian W. Dawes
Oxid Med Cell Longev. 2013; 2013: 636287. Published online 2013 Jul 11. doi: 10.1155/2013/636287
PMCID:
PMC3727090
AbstractArticlePDF–2.5M
17.
MTH1 and RGT1 demonstrate combined haploinsufficiency in regulation of the hexose transporter genes in Saccharomyces cerevisiae
Kevin L Dietzel, Vidhya Ramakrishnan, Erin E Murphy, Linda F Bisson
BMC Genet. 2012; 13: 107. Published online 2012 Dec 12. doi: 10.1186/1471-2156-13-107
PMCID:
PMC3564936
AbstractArticlePDF–895K
18.
Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs
Sara Sharifpoor, Dewald van Dyk, Michael Costanzo, Anastasia Baryshnikova, Helena Friesen, Alison C. Douglas, Ji-Young Youn, Benjamin VanderSluis, Chad L. Myers, Balázs Papp, Charles Boone, Brenda J. Andrews
Genome Res. 2012 Apr; 22(4): 791–801. doi: 10.1101/gr.129213.111
PMCID:
PMC3317160
AbstractArticlePDF–998K
19.
A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria
Suzanne Hoppins, Sean R. Collins, Ann Cassidy-Stone, Eric Hummel, Rachel M. DeVay, Laura L. Lackner, Benedikt Westermann, Maya Schuldiner, Jonathan S. Weissman, Jodi Nunnari
J Cell Biol. 2011 Oct 17; 195(2): 323–340. doi: 10.1083/jcb.201107053
PMCID:
PMC3198156
AbstractArticlePDF–4.1M
20.
Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes
Kenneth K Lee, Mihaela E Sardiu, Selene K Swanson, Joshua M Gilmore, Michael Torok, Patrick A Grant, Laurence Florens, Jerry L Workman, Michael P Washburn
Mol Syst Biol. 2011; 7: 503. Published online 2011 Jul 5. doi: 10.1038/msb.2011.40
PMCID:
PMC3159981
AbstractArticlePDF–1.0M

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