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Select item 99922821.

Seasonal cues act through the circadian clock and Pigment Dispersing Factor to control EYES ABSENT and downstream physiological changes

Sergio Hidalgo, Maribel Anguiano, Christine A. Tabuloc, Joanna C. Chiu

Curr Biol. Author manuscript; available in PMC 2024 Feb 27.

Published in final edited form as: Curr Biol. 2023 Feb 27; 33(4): 675–687.e5. Published online 2023 Jan 27. doi: 10.1016/j.cub.2023.01.006

Correction in:: Curr Biol. 2023 Mar 13; 33(5): 1006–1008.

PMCID:: PMC9992282

Abstract Article PDF–1.4M

Select item 93364952.

Chromatin and transcriptomic profiling uncover dysregulation of the Tip60 HAT/HDAC2 epigenomic landscape in the neurodegenerative brain

Mariah Beaver, Bhanu Chandra Karisetty, Haolin Zhang, Akanksha Bhatnagar, Ellen Armour, Visha Parmar, Reshma Brown, Merry Xiang, Felice Elefant

Epigenetics. 2022; 17(7): 786–807. Published online 2021 Aug 9. doi: 10.1080/15592294.2021.1959742

PMCID:: PMC9336495

Abstract Article PDF–3.5M

Select item 90389583.

Timeless in animal circadian clocks and beyond

Yao D. Cai, Joanna C. Chiu

FEBS J. 2022 Nov; 289(21): 6559–6575. Published online 2021 Nov 18. doi: 10.1111/febs.16253

PMCID:: PMC9038958

Abstract Article PDF–1013K

Select item 77326484.

Model and Non-model Insects in Chronobiology

Katharina Beer, Charlotte Helfrich-Förster

Front Behav Neurosci. 2020; 14: 601676. Published online 2020 Nov 26. doi: 10.3389/fnbeh.2020.601676

PMCID:: PMC7732648

Abstract Article PDF–2.2M

Select item 67277505.

Unbiased Boolean analysis of public gene expression data for cell cycle gene identification

Sarah A. Dabydeen, Arshad Desai, Debashis Sahoo

Mol Biol Cell. 2019 Jul 1; 30(14): 1770–1779. doi: 10.1091/mbc.E19-01-0013

PMCID:: PMC6727750

Abstract Article PDF–5.4M

Select item 64563126.

Dissection of Complex, Fitness-Related Traits in Multiple Drosophila Mapping Populations Offers Insight into the Genetic Control of Stress Resistance

Elizabeth R. Everman, Casey L. McNeil, Jennifer L. Hackett, Clint L. Bain, Stuart J. Macdonald

Genetics. 2019 Apr; 211(4): 1449–1467. Published online 2019 Feb 13. doi: 10.1534/genetics.119.301930

PMCID:: PMC6456312

Abstract Article PDF–1.9M

Select item 63401507.

Targeted substrate degradation by Kelch controls the actin cytoskeleton during ring canal expansion

Andrew M. Hudson, Katelynn M. Mannix, Julianne A. Gerdes, Molly C. Kottemann, Lynn Cooley

Development. 2019 Jan 1; 146(1): dev169219. Published online 2019 Jan 2. doi: 10.1242/dev.169219

PMCID:: PMC6340150

Abstract Article

Select item 57078058.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 56890029.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 545520110.

In vivo screening reveals interactions between Drosophila Manf and genes involved in the mitochondria and the ubiquinone synthesis pathway

Riitta Lindström, Päivi Lindholm, Mari Palgi, Mart Saarma, Tapio I. Heino

BMC Genet. 2017; 18: 52. Published online 2017 Jun 2. doi: 10.1186/s12863-017-0509-3

PMCID:: PMC5455201

Abstract Article PDF–3.9M

Select item 540616711.

Mobile-phone radiation-induced perturbation of gene-expression profiling, redox equilibrium and sporadic-apoptosis control in the ovary of Drosophila melanogaster

Areti K. Manta, Deppie Papadopoulou, Alexander P. Polyzos, Adamantia F. Fragopoulou, Aikaterini S. Skouroliakou, Dimitris Thanos, Dimitrios J. Stravopodis, Lukas H. Margaritis

Fly (Austin) 2017; 11(2): 75–95. Published online 2016 Dec 14. doi: 10.1080/19336934.2016.1270487

PMCID:: PMC5406167

Abstract Article PDF–1.4M

Select item 488965812.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 485396213.

A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population

Palle Duun Rohde, Kristian Krag, Volker Loeschcke, Johannes Overgaard, Peter Sørensen, Torsten Nygaard Kristensen

Int J Genomics. 2016; 2016: 2157494. Published online 2016 Apr 19. doi: 10.1155/2016/2157494

PMCID:: PMC4853962

Abstract Article PDF–1.0M

Select item 478080914.

The Adaptive Significance of Natural Genetic Variation in the DNA Damage Response of Drosophila melanogaster

Nicolas Svetec, Julie M. Cridland, Li Zhao, David J. Begun

PLoS Genet. 2016 Mar; 12(3): e1005869. Published online 2016 Mar 7. doi: 10.1371/journal.pgen.1005869

PMCID:: PMC4780809

Abstract Article PDF–543K

Select item 473800515.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 452833016.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders

Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937

PMCID:: PMC4528330

Abstract Article PDF–2.2M

Select item 452832917.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data

Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium

G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929

PMCID:: PMC4528329

Abstract Article PDF–4.9M

Select item 437949718.

A library of MiMICs allows tagging of genes and reversible, spatial and temporal knockdown of proteins in Drosophila

Sonal Nagarkar-Jaiswal, Pei-Tseng Lee, Megan E Campbell, Kuchuan Chen, Stephanie Anguiano-Zarate, Manuel Cantu Gutierrez, Theodore Busby, Wen-Wen Lin, Yuchun He, Karen L Schulze, Benjamin W Booth, Martha Evans-Holm, Koen JT Venken, Robert W Levis, Allan C Spradling, Roger A Hoskins, Hugo J Bellen

eLife. 2015; 4: e05338. Published online 2015 Mar 31. doi: 10.7554/eLife.05338

PMCID:: PMC4379497

Abstract Article PDF–7.7M

Select item 437417719.

Evidence that natural selection maintains genetic variation for sleep in Drosophila melanogaster

Nicolas Svetec, Li Zhao, Perot Saelao, Joanna C Chiu, David J Begun

BMC Evol Biol. 2015; 15: 41. Published online 2015 Mar 13. doi: 10.1186/s12862-015-0316-2

PMCID:: PMC4374177

Abstract Article PDF–970K

Select item 435288720.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

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