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Items: 1 to 20 of 27

1.
Notch signaling generates the “cut here line” on the cuticle of the puparium in Drosophila melanogaster
Reiko Tajiri, Ayaka Hirano, Yu-ya Kaibara, Daiki Tezuka, Zhengyang Chen, Tetsuya Kojima
iScience. 2023 Aug 18; 26(8): 107279. Published online 2023 Jul 4. doi: 10.1016/j.isci.2023.107279
PMCID:
PMC10387574
AbstractArticlePDF–7.4M
2.
Next-generation large-scale binary protein interaction network for Drosophila melanogaster
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István A. Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth H. Wan, Joel S. Bader, Dawit Balcha, Wenting Bian, Benjamin W. Booth, Atina G. Coté, Steffi de Rouck, Alice Desbuleux, Kah Yong Goh, Dae-Kyum Kim, Jennifer J. Knapp, Wen Xing Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Julianne Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael A. Calderwood, David E. Hill, Susan E. Celniker, Marc Vidal, Norbert Perrimon, Stephanie E. Mohr
Nat Commun. 2023; 14: 2162. Published online 2023 Apr 15. doi: 10.1038/s41467-023-37876-0
PMCID:
PMC10105736
AbstractArticlePDF–3.2M
3.
Adult and Larval Tracheal Systems Exhibit Different Molecular Architectures in Drosophila
Judith Bossen, Ruben Prange, Jan-Philip Kühle, Sven Künzel, Xiao Niu, Jörg U. Hammel, Laura Krieger, Mirjam Knop, Birte Ehrhardt, Karin Uliczka, Susanne Krauss-Etschmann, Thomas Roeder
Int J Mol Sci. 2023 Mar; 24(6): 5628. Published online 2023 Mar 15. doi: 10.3390/ijms24065628
PMCID:
PMC10052349
AbstractArticlePDF–5.6M
4.
Tweedle proteins form extracellular two-dimensional structures defining body and cell shape in Drosophila melanogaster
Renata Zuber, Yiwen Wang, Nicole Gehring, Slawomir Bartoszewski, Bernard Moussian
Open Biol. 2020 Dec; 10(12): 200214. Published online 2020 Dec 9. doi: 10.1098/rsob.200214
PMCID:
PMC7776580
AbstractArticlePDF–3.2M
5.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
6.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
7.
Mechanical Control of Whole Body Shape by a Single Cuticular Protein Obstructor-E in Drosophila melanogaster
Reiko Tajiri, Nobuhiro Ogawa, Haruhiko Fujiwara, Tetsuya Kojima
PLoS Genet. 2017 Jan; 13(1): e1006548. Published online 2017 Jan 11. doi: 10.1371/journal.pgen.1006548
PMCID:
PMC5226733
AbstractArticlePDF–5.6M
8.
Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome
Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair
Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999
PMCID:
PMC4928047
AbstractArticlePDF–3.1M
9.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
10.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
11.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
12.
Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library
Nick Lowe, Johanna S. Rees, John Roote, Ed Ryder, Irina M. Armean, Glynnis Johnson, Emma Drummond, Helen Spriggs, Jenny Drummond, Jose P. Magbanua, Huw Naylor, Bénédicte Sanson, Rebecca Bastock, Sven Huelsmann, Vitor Trovisco, Matthias Landgraf, Seymour Knowles-Barley, J. Douglas Armstrong, Helen White-Cooper, Celia Hansen, Roger G. Phillips, The UK Drosophila Protein Trap Screening Consortium, Kathryn S. Lilley, Steven Russell, Daniel St Johnston
Development. 2014 Oct; 141(20): 3994–4005. doi: 10.1242/dev.111054
PMCID:
PMC4197710
AbstractArticle
13.
Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos
Claire M. Lye, Huw W. Naylor, Bénédicte Sanson
Development. 2014 Oct; 141(20): 4006–4017. doi: 10.1242/dev.111310
PMCID:
PMC4197698
AbstractArticle
14.
Reduction in maternal Polycomb levels contributes to transgenerational inheritance of a response to toxic stress in flies
Shay Stern, Orli Snir, Eran Mizrachi, Matana Galili, Inbal Zaltsman, Yoav Soen
J Physiol. 2014 Jun 1; 592(Pt 11): 2343–2355. Published online 2014 Mar 31. doi: 10.1113/jphysiol.2014.271445
PMCID:
PMC4048092
AbstractArticlePDF–1.1M
15.
Activation of Smurf E3 Ligase Promoted by Smoothened Regulates Hedgehog Signaling through Targeting Patched Turnover
Shoujun Huang, Zhao Zhang, Chunxia Zhang, Xiangdong Lv, Xiudeng Zheng, Zhenping Chen, Liwei Sun, Hailong Wang, Yuanxiang Zhu, Jing Zhang, Shuyan Yang, Yi Lu, Qinmiao Sun, Yi Tao, Feng Liu, Yun Zhao, Dahua Chen
PLoS Biol. 2013 Nov; 11(11): e1001721. Published online 2013 Nov 26. doi: 10.1371/journal.pbio.1001721
PMCID:
PMC3841102
AbstractArticlePDF–3.1M
16.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
17.
The Many Landscapes of Recombination in Drosophila melanogaster
Josep M. Comeron, Ramesh Ratnappan, Samuel Bailin
PLoS Genet. 2012 Oct; 8(10): e1002905. Published online 2012 Oct 11. doi: 10.1371/journal.pgen.1002905
PMCID:
PMC3469467
AbstractArticlePDF–1.6M
18.
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs
Enrique Blanco, Marina Ruiz-Romero, Sergi Beltran, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas
BMC Dev Biol. 2010; 10: 94. Published online 2010 Sep 2. doi: 10.1186/1471-213X-10-94
PMCID:
PMC2939566
AbstractArticlePDF–5.1M
19.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
20.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M

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