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Items: 1 to 20 of 38

1.
A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins
Annabel Guichard, Shenzhao Lu, Oguz Kanca, Daniel Bressan, Yan Huang, Mengqi Ma, Sara Sanz Juste, Jonathan C. Andrews, Kristy L. Jay, Marketta Sneider, Ruth Schwartz, Mei-Chu Huang, Danqing Bei, Hongling Pan, Liwen Ma, Wen-Wen Lin, Ankush Auradkar, Pranjali Bhagwat, Soo Park, Kenneth H. Wan, Takashi Ohsako, Toshiyuki Takano-Shimizu, Susan E. Celniker, Michael F. Wangler, Shinya Yamamoto, Hugo J. Bellen, Ethan Bier
Cell Rep. Author manuscript; available in PMC 2024 Mar 25.
Published in final edited form as: Cell Rep. 2023 Aug 29; 42(8): 112842. Published online 2023 Jul 20. doi: 10.1016/j.celrep.2023.112842
PMCID:
PMC10962759
AbstractArticlePDF–3.0M
2.
Structural and Comparative Analyses of Insects Suggest the Presence of an Ultra-Conserved Regulatory Element of the Genes Encoding Vacuolar-Type ATPase Subunits and Assembly Factors
Domenica Lovero, Damiano Porcelli, Luca Giordano, Claudio Lo Giudice, Ernesto Picardi, Graziano Pesole, Eugenia Pignataro, Antonio Palazzo, René Massimiliano Marsano
Biology (Basel) 2023 Aug; 12(8): 1127. Published online 2023 Aug 13. doi: 10.3390/biology12081127
PMCID:
PMC10452791
AbstractArticlePDF–10M
3.
FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas
Sue A Krause, Gayle Overend, Julian A T Dow, David P Leader
Nucleic Acids Res. 2022 Jan 7; 50(D1): D1010–D1015. Published online 2021 Oct 29. doi: 10.1093/nar/gkab971
PMCID:
PMC8728208
AbstractArticlePDF–2.8M
4.
V-ATPase controls tumor growth and autophagy in a Drosophila model of gliomagenesis
Miriam Formica, Alessandra Maria Storaci, Irene Bertolini, Francesca Carminati, Helene Knævelsrud, Valentina Vaira, Thomas Vaccari
Autophagy. 2021; 17(12): 4442–4452. Published online 2021 May 12. doi: 10.1080/15548627.2021.1918915
PMCID:
PMC8726678
AbstractArticlePDF–3.6M
5.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
6.
A Novel Neuron-Specific Regulator of the V-ATPase in Drosophila
Amina Dulac, Abdul-Raouf Issa, Jun Sun, Giorgio Matassi, Célia Jonas, Baya Chérif-Zahar, Daniel Cattaert, Serge Birman
eNeuro. 2021 Sep-Oct; 8(5): ENEURO.0193-21.2021. Prepublished online 2021 Oct 7. Published online 2021 Oct 21. doi: 10.1523/ENEURO.0193-21.2021
Correction in:
eNeuro. 2022 Sep-Oct; 9(5): ENEURO.0389-22.2022.
PMCID:
PMC8541823
AbstractArticlePDF–3.5M
7.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
8.
A Genetic Screen Using the Drosophila melanogaster TRiP RNAi Collection To Identify Metabolic Enzymes Required for Eye Development
Rose C. Pletcher, Sara L. Hardman, Sydney F. Intagliata, Rachael L. Lawson, Aumunique Page, Jason M. Tennessen
G3 (Bethesda) 2019 Jul; 9(7): 2061–2070. Published online 2019 Apr 29. doi: 10.1534/g3.119.400193
PMCID:
PMC6643872
AbstractArticlePDF–1.7M
9.
Ubiquilins Regulate Autophagic Flux through mTOR Signaling and Lysosomal Acidification
Mümine Şentürk, Guang Lin, Zhongyuan Zuo, Dongxue Mao, Emma Watson, Antonios G. Mikos, Hugo J. Bellen
Nat Cell Biol. Author manuscript; available in PMC 2019 Aug 25.
Published in final edited form as: Nat Cell Biol. 2019 Mar; 21(3): 384–396. Published online 2019 Feb 25. doi: 10.1038/s41556-019-0281-x
PMCID:
PMC6534127
AbstractArticlePDF–4.8M
10.
ATP6AP2 functions as a V-ATPase assembly factor in the endoplasmic reticulum
Maria Clara Guida, Tobias Hermle, Laurie A. Graham, Virginie Hauser, Margret Ryan, Tom H. Stevens, Matias Simons
Mol Biol Cell. 2018 Sep 1; 29(18): 2156–2164. doi: 10.1091/mbc.E18-04-0234
PMCID:
PMC6249795
AbstractArticlePDF–2.8M
11.
Mutations in the X-linked ATP6AP2 cause a glycosylation disorder with autophagic defects
Maria A. Rujano, Magda Cannata Serio, Ganna Panasyuk, Romain Péanne, Janine Reunert, Daisy Rymen, Virginie Hauser, Julien H. Park, Peter Freisinger, Erika Souche, Maria Clara Guida, Esther M. Maier, Yoshinao Wada, Stefanie Jäger, Nevan J. Krogan, Oliver Kretz, Susana Nobre, Paula Garcia, Dulce Quelhas, Thomas D. Bird, Wendy H. Raskind, Michael Schwake, Sandrine Duvet, Francois Foulquier, Gert Matthijs, Thorsten Marquardt, Matias Simons
J Exp Med. 2017 Dec 4; 214(12): 3707–3729. doi: 10.1084/jem.20170453
PMCID:
PMC5716037
AbstractArticlePDF–3.8M
12.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
13.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
14.
Control of lysosomal biogenesis and Notch-dependent tissue patterning by components of the TFEB-V-ATPase axis in Drosophila melanogaster
Emiliana Tognon, Francis Kobia, Ilaria Busi, Arianna Fumagalli, Federico De Masi, Thomas Vaccari
Autophagy. 2016 Mar; 12(3): 499–514. Published online 2016 Jan 4. doi: 10.1080/15548627.2015.1134080
PMCID:
PMC4836007
AbstractArticlePDF–1.9M
15.
Drosophila Mitf regulates the V-ATPase and the lysosomal-autophagic pathway
Valentina Bouché, Alma Perez Espinosa, Luigi Leone, Marco Sardiello, Andrea Ballabio, Juan Botas
Autophagy. 2016 Mar; 12(3): 484–498. Published online 2016 Jan 13. doi: 10.1080/15548627.2015.1134081
PMCID:
PMC4835958
AbstractArticlePDF–2.2M
16.
Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions
Albert J. Erives
Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1
PMCID:
PMC4568025
AbstractArticlePDF–2.8M
17.
Mitf is a master regulator of the v-ATPase, forming a control module for cellular homeostasis with v-ATPase and TORC1
Tianyi Zhang, Qingxiang Zhou, Margret Helga Ogmundsdottir, Katrin Möller, Robert Siddaway, Lionel Larue, Michael Hsing, Sek Won Kong, Colin Ronald Goding, Arnar Palsson, Eirikur Steingrimsson, Francesca Pignoni
J Cell Sci. 2015 Aug 1; 128(15): 2938–2950. doi: 10.1242/jcs.173807
PMCID:
PMC4540953
AbstractArticle
18.
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders
Madeline A. Crosby, L. Sian Gramates, Gilberto dos Santos, Beverley B. Matthews, Susan E. St. Pierre, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, David B. Emmert, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1737–1749. Published online 2015 Jun 24. doi: 10.1534/g3.115.018937
PMCID:
PMC4528330
AbstractArticlePDF–2.2M
19.
Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data
Beverley B. Matthews, Gilberto dos Santos, Madeline A. Crosby, David B. Emmert, Susan E. St. Pierre, L. Sian Gramates, Pinglei Zhou, Andrew J. Schroeder, Kathleen Falls, Victor Strelets, Susan M. Russo, William M. Gelbart, the FlyBase Consortium
G3 (Bethesda) 2015 Aug; 5(8): 1721–1736. Published online 2015 Jun 24. doi: 10.1534/g3.115.018929
PMCID:
PMC4528329
AbstractArticlePDF–4.9M
20.
Autophagosome–lysosome fusion is independent of V-ATPase-mediated acidification
Caroline Mauvezin, Péter Nagy, Gábor Juhász, Thomas P. Neufeld
Nat Commun. 2015 May 11; 6: 7007. Published online 2015 May 11. doi: 10.1038/ncomms8007
PMCID:
PMC4428688
AbstractArticlePDF–7.5M

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