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Select item 115718001.

Sod1-deficient cells are impaired in formation of the modified nucleosides mcm⁵s²U and yW in tRNA

Fu Xu, Anders S. Byström, Marcus J.O. Johansson

RNA. 2024 Dec; 30(12): 1586–1595. doi: 10.1261/rna.080181.124

PMCID:: PMC11571800

Abstract Article PDF–1.0M

Select item 114465482.

The zinc-finger transcription factor Sfp1 imprints specific classes of mRNAs and links their synthesis to cytoplasmic decay

Moran Kelbert, Antonio Jordán-Pla, Lola de Miguel-Jiménez, José García-Martínez, Michael Selitrennik, Adi Guterman, Noa Henig, Sander Granneman, José E Pérez-Ortín, Sebastián Chávez, Mordechai Choder

eLife. 2024; 12: RP90766. Published online 2024 Oct 2. doi: 10.7554/eLife.90766

PMCID:: PMC11446548

Abstract Article PDF–7.1M

Select item 112945833.

Multi-signal regulation of the GSK-3β homolog Rim11 controls meiosis entry in budding yeast

Johanna Kociemba, Andreas Christ Sølvsten Jørgensen, Nika Tadić, Anthony Harris, Theodora Sideri, Wei Yee Chan, Fairouz Ibrahim, Elçin Ünal, Mark Skehel, Vahid Shahrezaei, Orlando Argüello-Miranda, Folkert Jacobus van Werven

EMBO J. 2024 Aug; 43(15): 3256–3286. Published online 2024 Jun 17. doi: 10.1038/s44318-024-00149-7

PMCID:: PMC11294583

Abstract Article PDF–5.1M

Select item 108724774.

Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle

Michael J. O’Brien, Athar Ansari

Biochim Biophys Acta Proteins Proteom. Author manuscript; available in PMC 2024 Feb 16.

Published in final edited form as: Biochim Biophys Acta Proteins Proteom. 2024 Jan 1; 1872(1): 140968. Published online 2023 Oct 19. doi: 10.1016/j.bbapap.2023.140968

PMCID:: PMC10872477

Abstract Article PDF–1.7M

Select item 107988585.

Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking

Lucas J. Marmorale, Huan Jin, Thomas G. Reidy, Brandon Palomino-Alonso, Christopher J. Zysnarski, Fatima Jordan-Javed, Sagar Lahiri, Mara C. Duncan

J Cell Biol. 2024 Mar 4; 223(3): e202309047. Published online 2024 Jan 19. doi: 10.1083/jcb.202309047

PMCID:: PMC10798858

Abstract Article PDF–6.4M

Select item 107700426.

Nuclear Hsp104 safeguards the dormant translation machinery during quiescence

Verena Kohler, Andreas Kohler, Lisa Larsson Berglund, Xinxin Hao, Sarah Gersing, Axel Imhof, Thomas Nyström, Johanna L. Höög, Martin Ott, Claes Andréasson, Sabrina Büttner

Nat Commun. 2024; 15: 315. Published online 2024 Jan 5. doi: 10.1038/s41467-023-44538-8

PMCID:: PMC10770042

Abstract Article PDF–5.1M

Select item 107001387.

The social and structural architecture of the yeast protein interactome

André C. Michaelis, Andreas-David Brunner, Maximilian Zwiebel, Florian Meier, Maximilian T. Strauss, Isabell Bludau, Matthias Mann

Nature. 2023; 624(7990): 192–200. Published online 2023 Nov 15. doi: 10.1038/s41586-023-06739-5

PMCID:: PMC10700138

Abstract Article PDF–20M

Select item 105147008.

Xrn1 biochemically associates with eisosome proteins after the post diauxic shift in yeast

Baptiste Courtin, Abdelkader Namane, Maite Gomard, Laura Meyer, Alain Jacquier, Micheline Fromont-Racine

MicroPubl Biol. 2023; 2023: 10.17912/micropub.biology.000926. Published online 2023 Sep 7. doi: 10.17912/micropub.biology.000926

PMCID:: PMC10514700

Abstract Article PDF–1.7M

Select item 102333689.

A systematic proximity ligation approach to studying protein‐substrate specificity identifies the substrate spectrum of the Ssh1 translocon

Nir Cohen, Naama Aviram, Maya Schuldiner

EMBO J. 2023 Jun; 42(11): e113385. Published online 2023 Apr 19. doi: 10.15252/embj.2022113385

PMCID:: PMC10233368

Abstract Article PDF–1.2M

Select item 993406110.

SOD1 is an essential H₂S detoxifying enzyme

Christopher H. Switzer, Shingo Kasamatsu, Hideshi Ihara, Philip Eaton

Proc Natl Acad Sci U S A. 2023 Jan 17; 120(3): e2205044120. Published online 2023 Jan 11. doi: 10.1073/pnas.2205044120

PMCID:: PMC9934061

Abstract Article PDF–1.6M

Select item 983624411.

Meiotic resetting of the cellular Sod1 pool is driven by protein aggregation, degradation, and transient LUTI-mediated repression

Helen M. Vander Wende, Mounika Gopi, Megan Onyundo, Claudia Medrano, Temiloluwa Adanlawo, Gloria Ann Brar

J Cell Biol. 2023 Mar 6; 222(3): e202206058. Published online 2023 Jan 9. doi: 10.1083/jcb.202206058

PMCID:: PMC9836244

Abstract Article PDF–7.3M

Select item 982091812.

Unbalance between Pyridine Nucleotide Cofactors in The SOD1 Deficient Yeast Saccharomyces cerevisiae Causes Hypersensitivity to Alcohols and Aldehydes

Magdalena Kwolek-Mirek, Sabina Bednarska, Aleksandra Dubicka-Lisowska, Roman Maslanka, Renata Zadrag-Tecza, Pawel Kaszycki

Int J Mol Sci. 2023 Jan; 24(1): 659. Published online 2022 Dec 30. doi: 10.3390/ijms24010659

PMCID:: PMC9820918

Abstract Article PDF–1.3M

Select item 920981113.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 901042414.

Proteolysis of adaptor protein Mmr1 during budding is necessary for mitochondrial homeostasis in Saccharomyces cerevisiae

Keisuke Obara, Taku Yoshikawa, Ryu Yamaguchi, Keiko Kuwata, Kunio Nakatsukasa, Kohei Nishimura, Takumi Kamura

Nat Commun. 2022; 13: 2005. Published online 2022 Apr 14. doi: 10.1038/s41467-022-29704-8

PMCID:: PMC9010424

Abstract Article PDF–4.5M

Select item 893465115.

Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site

Rosemary A Bayne, Uma Jayachandran, Aleksandra Kasprowicz, Stefan Bresson, David Tollervey, Edward W J Wallace, Atlanta G Cook

Nucleic Acids Res. 2022 Mar 21; 50(5): 2923–2937. Published online 2021 Jul 24. doi: 10.1093/nar/gkab615

PMCID:: PMC8934651

Abstract Article PDF–4.4M

Select item 874057816.

Sod1 integrates oxygen availability to redox regulate NADPH production and the thiol redoxome

Claudia Montllor-Albalate, Hyojung Kim, Anna E. Thompson, Alex P. Jonke, Matthew P. Torres, Amit R. Reddi

Proc Natl Acad Sci U S A. 2022 Jan 4; 119(1): e2023328119. Published online 2021 Dec 30. doi: 10.1073/pnas.2023328119

PMCID:: PMC8740578

Abstract Article PDF–2.0M

Select item 868288917.

The mitochondrial copper chaperone COX11 has an additional role in cellular redox homeostasis

Ivan Radin, Luise Kost, Uta Gey, Iris Steinebrunner, Gerhard Rödel

PLoS One. 2021; 16(12): e0261465. Published online 2021 Dec 17. doi: 10.1371/journal.pone.0261465

PMCID:: PMC8682889

Abstract Article PDF–2.0M

Select item 847196318.

Low Toxicological Impact of Commercial Pristine Multi-Walled Carbon Nanotubes on the Yeast Saccharomyces cerevisiae

Sonia Martel Martín, Rocío Barros, Brixhilda Domi, Carlos Rumbo, Matteo Poddighe, Santiago Aparicio, Maria Suarez-Diez, Juan Antonio Tamayo-Ramos

Nanomaterials (Basel) 2021 Sep; 11(9): 2272. Published online 2021 Sep 1. doi: 10.3390/nano11092272

PMCID:: PMC8471963

Abstract Article PDF–2.4M

Select item 823465919.

A New Geniposidic Acid Derivative Exerts Antiaging Effects through Antioxidative Stress and Autophagy Induction

Ying Wang, Yanjun Pan, Yanan Liu, Dejene Disasa, Matsuura Akira, Lan Xiang, Jianhua Qi

Antioxidants (Basel) 2021 Jun; 10(6): 987. Published online 2021 Jun 21. doi: 10.3390/antiox10060987

PMCID:: PMC8234659

Abstract Article PDF–2.2M

Select item 792693020.

Actin Cytoskeleton Regulation by the Yeast NADPH Oxidase Yno1p Impacts Processes Controlled by MAPK Pathways

Manuela Weber, Sukanya Basu, Beatriz González, Gregor P. Greslehner, Stefanie Singer, Danusa Haskova, Jiri Hasek, Michael Breitenbach, Campbell W.Gourlay, Paul J. Cullen, Mark Rinnerthaler

Antioxidants (Basel) 2021 Feb; 10(2): 322. Published online 2021 Feb 22. doi: 10.3390/antiox10020322