PMC Links for GEO Profiles (Select 52729079) - PMC

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Items: 17

Select item 108029521.

Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly

Marcos Schaan Profes, Araven Tiroumalechetty, Neel Patel, Stephanie S. Lauar, Simone Sidoli, Peri T. Kurshan

PLoS Biol. 2024 Jan; 22(1): e3002466. Published online 2024 Jan 22. doi: 10.1371/journal.pbio.3002466

PMCID:: PMC10802952

Abstract Article PDF–2.7M

Select item 106176262.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 103450903.

Reprogramming of the transcriptome after heat stress mediates heat hormesis in Caenorhabditis elegans

Fan Xu, Ruoyao Li, Erika D. von Gromoff, Friedel Drepper, Bettina Knapp, Bettina Warscheid, Ralf Baumeister, Wenjing Qi

Nat Commun. 2023; 14: 4176. Published online 2023 Jul 13. doi: 10.1038/s41467-023-39882-8

PMCID:: PMC10345090

Abstract Article PDF–8.1M

Select item 103207664.

A transcriptional cofactor regulatory network for the C. elegans intestine

Brent B Horowitz, Shivani Nanda, Albertha J M Walhout

G3 (Bethesda) 2023 Jul; 13(7): jkad096. Published online 2023 Apr 29. doi: 10.1093/g3journal/jkad096

PMCID:: PMC10320766

Abstract Article PDF–1.9M

Select item 83311835.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 79951766.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 72506577.

Dose-dependent functions of SWI/SNF BAF in permitting and inhibiting cell proliferation in vivo

Aniek van der Vaart, Molly Godfrey, Vincent Portegijs, Sander van den Heuvel

Sci Adv. 2020 May; 6(21): eaay3823. Published online 2020 May 20. doi: 10.1126/sciadv.aay3823

PMCID:: PMC7250657

Abstract Article PDF–829K

Select item 68273688.

Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules

Elisabeth A. Marnik, J. Heath Fuqua, Catherine S. Sharp, Jesse D. Rochester, Emily L. Xu, Sarah E. Holbrook, Dustin L. Updike

Genetics. 2019 Nov; 213(3): 923–939. Published online 2019 Sep 10. doi: 10.1534/genetics.119.302670

PMCID:: PMC6827368

Abstract Article PDF–4.0M

Select item 62165909.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 485894510.

In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics

Jia-Xuan Chen, Patricia G. Cipriani, Desirea Mecenas, Jolanta Polanowska, Fabio Piano, Kristin C. Gunsalus, Matthias Selbach

Mol Cell Proteomics. 2016 May; 15(5): 1642–1657. Published online 2016 Feb 24. doi: 10.1074/mcp.M115.053975

PMCID:: PMC4858945

Abstract Article PDF–3.1M

Select item 478157011.

Wnt signaling.

David M Eisenmann

WormBook. 2005 : 1–17. Published online 2005 Jun 25. doi: 10.1895/wormbook.1.7.1

PMCID:: PMC4781570

Abstract Article

Select item 478111112.

Transcriptional regulation.

Peter G Okkema, Michael Krause

WormBook. 2005 : 1–40. Published online 2005 Dec 23. doi: 10.1895/wormbook.1.45.1

PMCID:: PMC4781111

Abstract Article

Select item 436420113.

SWI/SNF chromatin remodeling regulates alcohol response behaviors in Caenorhabditis elegans and is associated with alcohol dependence in humans

Laura D. Mathies, GinaMari G. Blackwell, Makeda K. Austin, Alexis C. Edwards, Brien P. Riley, Andrew G. Davies, Jill C. Bettinger

Proc Natl Acad Sci U S A. 2015 Mar 10; 112(10): 3032–3037. Published online 2015 Feb 23. doi: 10.1073/pnas.1413451112

PMCID:: PMC4364201

Abstract Article PDF–862K

Select item 396248614.

Caenorhabditis elegans SWI/SNF Subunits Control Sequential Developmental Stages in the Somatic Gonad

Edward E. Large, Laura D. Mathies

G3 (Bethesda) 2014 Mar; 4(3): 471–483. Published online 2014 Jan 8. doi: 10.1534/g3.113.009852

PMCID:: PMC3962486

Abstract Article PDF–1.9M

Select item 374895515.

DAF-16/FOXO employs the chromatin remodeller SWI/SNF to promote stress resistance and longevity

Christian G. Riedel, Robert H. Dowen, Guinevere F. Lourenco, Natalia V. Kirienko, Thomas Heimbucher, Jason A. West, Sarah K. Bowman, Robert E. Kingston, Andrew Dillin, John M. Asara, Gary Ruvkun

Nat Cell Biol. Author manuscript; available in PMC 2013 Aug 21.

Published in final edited form as: Nat Cell Biol. 2013 May; 15(5): 491–501. Published online 2013 Apr 21. doi: 10.1038/ncb2720