PMC Links for GEO Profiles (Select 52730499) - PMC

Select item 106176261.

SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans

Valerie J. Robert, Matthieu Caron, Loic Gely, Annie Adrait, Victoria Pakulska, Yohann Couté, Manon Chevalier, Christian G. Riedel, Cecile Bedet, Francesca Palladino

Development. 2023 Nov 1; 150(21): dev201755. Published online 2023 Oct 17. doi: 10.1242/dev.201755

PMCID:: PMC10617626

Abstract Article

Select item 100186472.

C. elegans Gonad Dissection and Freeze Crack for Immunofluorescence and DAPI Staining

Deepshikha Ananthaswamy, Jaime C. Croft, Natilia Woozencroft, Teresa W. Lee

J Vis Exp. Author manuscript; available in PMC 2023 Mar 16.

Published in final edited form as: J Vis Exp. 2022 Sep 16; (187): 10.3791/64204. Published online 2022 Sep 16. doi: 10.3791/64204

PMCID:: PMC10018647

Abstract Article PDF–749K

Select item 83311833.

Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules

Patricia Giselle Cipriani, Olivia Bay, John Zinno, Michelle Gutwein, Hin Hark Gan, Vinay K Mayya, George Chung, Jia-Xuan Chen, Hala Fahs, Yu Guan, Thomas F Duchaine, Matthias Selbach, Fabio Piano, Kristin C Gunsalus

eLife. 2021; 10: e60833. Published online 2021 Jul 5. doi: 10.7554/eLife.60833

PMCID:: PMC8331183

Abstract Article PDF–8.5M

Select item 82105744.

A global chromatin compaction pathway that represses germline gene expression during starvation

Mezmur D. Belew, Emilie Chien, Matthew Wong, W. Matthew Michael

J Cell Biol. 2021 Sep 6; 220(9): e202009197. Published online 2021 Jun 15. doi: 10.1083/jcb.202009197

PMCID:: PMC8210574

Abstract Article PDF–4.2M

Select item 79951765.

EPIC: Software Toolkit for Elution Profile-Based Inference of Protein Complexes

Lucas ZhongMing Hu, Florian Goebels, June H. Tan, Eric Wolf, Uros Kuzmanov, Cuihong Wan, Sadhna Phanse, Changjiang Xu, Mike Schertzberg, Andrew G. Fraser, Gary D. Bader, Andrew Emili

Nat Methods. Author manuscript; available in PMC 2021 Mar 26.

Published in final edited form as: Nat Methods. 2019 Aug; 16(8): 737–742. Published online 2019 Jul 15. doi: 10.1038/s41592-019-0461-4

PMCID:: PMC7995176

Abstract Article PDF–1.0M

Select item 62165906.

OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes

Woojin Kim, Ryan S. Underwood, Iva Greenwald, Daniel D. Shaye

Genetics. 2018 Oct; 210(2): 445–461. Published online 2018 Aug 17. doi: 10.1534/genetics.118.301307

PMCID:: PMC6216590

Abstract Article PDF–1.4M

Select item 48589457.

In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics

Jia-Xuan Chen, Patricia G. Cipriani, Desirea Mecenas, Jolanta Polanowska, Fabio Piano, Kristin C. Gunsalus, Matthias Selbach

Mol Cell Proteomics. 2016 May; 15(5): 1642–1657. Published online 2016 Feb 24. doi: 10.1074/mcp.M115.053975

PMCID:: PMC4858945

Abstract Article PDF–3.1M

Select item 47810198.

The evolution of nematode sex determination: C. elegans as a reference point for comparative biology.

Eric S Haag

WormBook. 2005 : 1–14. Published online 2005 Dec 29. doi: 10.1895/wormbook.1.120.1

PMCID:: PMC4781019

Abstract Article

Select item 47808919.

Cell division.

Karen Oegema, Anthony A Hyman

WormBook. 2006 : 1–40. Published online 2006 Jan 19. doi: 10.1895/wormbook.1.72.1

PMCID:: PMC4780891

Abstract Article

Select item 398366210.

Genome-wide analysis of condensin binding in Caenorhabditis elegans

Anna-Lena Kranz, Chen-Yu Jiao, Lara Heermans Winterkorn, Sarah Elizabeth Albritton, Maxwell Kramer, Sevinç Ercan

Genome Biol. 2013; 14(10): R112. Published online 2013 Oct 14. doi: 10.1186/gb-2013-14-10-r112

PMCID:: PMC3983662

Abstract Article PDF–2.3M

Select item 341297811.

A Highly Efficient Multifunctional Tandem Affinity Purification Approach Applicable to Diverse Organisms

Hanhui Ma, Janel R. McLean, Lucy Fang-I Chao, Sebastian Mana-Capelli, Murugan Paramasivam, Kirsten A. Hagstrom, Kathleen L. Gould, Dannel McCollum

Mol Cell Proteomics. 2012 Aug; 11(8): 501–511. Published online 2012 Apr 3. doi: 10.1074/mcp.O111.016246

PMCID:: PMC3412978

Abstract Article PDF–528K

Select item 310207712.

OrthoList: A Compendium of C. elegans Genes with Human Orthologs

Daniel D. Shaye, Iva Greenwald

PLoS One. 2011; 6(5): e20085. Published online 2011 May 25. doi: 10.1371/journal.pone.0020085

Correction in:: PLoS One. 2014; 9(1): 10.1371/annotation/f5ffb738-a176-4a43-b0e0-249cdea45fe0.

PMCID:: PMC3102077

Abstract Article PDF–530K

Select item 268254913.

Three Distinct Condensin Complexes Control C. elegans Chromosome Dynamics

Gyorgyi Csankovszki, Karishma Collette, Karin Spahl, James Carey, Martha Snyder, Emily Petty, Uchita Patel, Tomoko Tabuchi, Hongbin Liu, Ian McLeod, James Thompson, Ali Sarkesik, John Yates, Barbara J. Meyer, Kirsten Hagstrom

Curr Biol. Author manuscript; available in PMC 2009 May 14.

Published in final edited form as: Curr Biol. 2009 Jan 13; 19(1): 9–19. doi: 10.1016/j.cub.2008.12.006

Correction in:: volume 19 on page 176

PMCID:: PMC2682549

Abstract Article PDF–3.4M

Select item 266330714.

Two Classes of Dosage Compensation Complex Binding Elements along Caenorhabditis elegans X Chromosomes

Timothy A. Blauwkamp, Gyorgyi Csankovszki

Mol Cell Biol. 2009 Apr; 29(8): 2023–2031. Published online 2009 Feb 2. doi: 10.1128/MCB.01448-08

PMCID:: PMC2663307

Abstract Article PDF–1.7M

Select item 259647815.

A protein domain-based interactome network for C. elegans early embryogenesis

Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D. Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A. Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P. Roth, Lilia M. Iakoucheva, A. Keith Dunker, Richard Bonneau, Kristin C. Gunsalus, David E. Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A. Hyman, Marc Vidal

Cell. Author manuscript; available in PMC 2009 Aug 8.

Published in final edited form as: Cell. 2008 Aug 8; 134(3): 534–545. doi: 10.1016/j.cell.2008.07.009

Correction in:: volume 151 on page 1633

PMCID:: PMC2596478

Abstract Article PDF–4.0M

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